CX301065

Overview
NameCX301065
Unique NameCX301065
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length678
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX301065 vs. ExPASy Swiss-Prot
Match: MORN4_RAT (MORN repeat-containing protein 4 OS=Rattus norvegicus GN=Morn4 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 9.949e-14
Identity = 39/112 (34.82%), Postives = 60/112 (53.57%), Query Frame = 3
Query:  354 YMQMEIYEGDWVNDKANGEGTYIHANGAQYTGDWRDDKQHGRGVETWPDGAKYDGEYADGKKNGKGTLYFADRSLYTGEFCNNDIQGYGVYVWPDER----RYEGEWYKNKM 677
            Y   E Y G+W   + +G G  + A+G  Y G + +   +G GV T+ DG++Y+GE++ GK NG G     D   + GEF N  + G+G+  +PD      R EG +  NK+
Sbjct:   10 YSSGEEYRGEWKEGRRHGFGQLMFADGGTYLGHFENGLFNGFGVLTFSDGSRYEGEFSQGKFNGVGVFIRYDNMTFEGEFKNGRVDGFGLLTFPDGSHGLPRNEGLFENNKL 121          

HSP 2 Score: 73.1738 bits (178), Expect = 1.437e-12
Identity = 33/88 (37.50%), Postives = 53/88 (60.23%), Query Frame = 3
Query:  408 EGTYIHANGAQYTGDWRDDKQHGRGVETWPDGAKYDGEYADGKKNGKGTLYFADRSLYTGEFCNNDIQGYGVYVWPDERRYEGEWYKN 671
            +G++ +++G +Y G+W++ ++HG G   + DG  Y G + +G  NG G L F+D S Y GEF      G GV++  D   +EGE +KN
Sbjct:    5 KGSFTYSSGEEYRGEWKEGRRHGFGQLMFADGGTYLGHFENGLFNGFGVLTFSDGSRYEGEFSQGKFNGVGVFIRYDNMTFEGE-FKN 91          
BLAST of CX301065 vs. ExPASy Swiss-Prot
Match: MORN4_BOVIN (MORN repeat-containing protein 4 OS=Bos taurus GN=MORN4 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.299e-13
Identity = 40/112 (35.71%), Postives = 59/112 (52.68%), Query Frame = 3
Query:  354 YMQMEIYEGDWVNDKANGEGTYIHANGAQYTGDWRDDKQHGRGVETWPDGAKYDGEYADGKKNGKGTLYFADRSLYTGEFCNNDIQGYGVYVWPDER----RYEGEWYKNKM 677
            Y   E Y G+W   + +G G  + A+G  Y G + +   +G GV T+ DG++Y+GE+A GK NG G     D   + GEF N  + G G+  +PD      R EG +  NK+
Sbjct:   10 YSSGEEYRGEWKEGRRHGFGQLMFADGGTYLGHFENGLFNGFGVLTFSDGSRYEGEFAQGKFNGVGVFIRHDNMTFEGEFKNGRVDGLGLLTFPDGSHGIPRNEGLFENNKL 121          

HSP 2 Score: 73.9442 bits (180), Expect = 8.423e-13
Identity = 33/88 (37.50%), Postives = 53/88 (60.23%), Query Frame = 3
Query:  408 EGTYIHANGAQYTGDWRDDKQHGRGVETWPDGAKYDGEYADGKKNGKGTLYFADRSLYTGEFCNNDIQGYGVYVWPDERRYEGEWYKN 671
            +G++ +++G +Y G+W++ ++HG G   + DG  Y G + +G  NG G L F+D S Y GEF      G GV++  D   +EGE +KN
Sbjct:    5 KGSFTYSSGEEYRGEWKEGRRHGFGQLMFADGGTYLGHFENGLFNGFGVLTFSDGSRYEGEFAQGKFNGVGVFIRHDNMTFEGE-FKN 91          
BLAST of CX301065 vs. ExPASy Swiss-Prot
Match: ALS2_MOUSE (Alsin OS=Mus musculus GN=Als2 PE=1 SV=2)

HSP 1 Score: 58.9214 bits (141), Expect = 1.321e-13
Identity = 35/104 (33.65%), Postives = 48/104 (46.15%), Query Frame = 3
Query:  369 IYEGDWVNDKANGEGTYIH-ANGAQYTGDWRDDKQHGRGVETWPDGAKYDGEYADGKKNGKGTLYFADRSLYTGEFCNN-DIQGYGVYVWPD----ERRYEGEW 662
            ++ G WV DK  G G +     G +Y G W+DD   G GV     G  Y+G +   K  G G L   D ++Y GEF ++  + G G    P     E  + GEW
Sbjct: 1144 MFIGQWVMDKKAGYGVFDDITRGEKYMGMWQDDVCQGNGVVVTQFGLYYEGNFHLNKMMGNGVLLSEDDTIYEGEFSDDWTLSGKGTLTMPHGDYIEGYFSGEW 1247          

HSP 2 Score: 38.1206 bits (87), Expect = 1.321e-13
Identity = 18/55 (32.73%), Postives = 28/55 (50.91%), Query Frame = 2
Query:  224 NGAVYIGQWRNGVRDGYGQ-----QTWIDGSRYEGDWSSDKANGRGKLIHADGDI 373
            +G +Y G +RNG+ DGYG+     +       Y G W   K  G+G   +A G++
Sbjct: 1062 DGKMYSGMFRNGLEDGYGEYRIPNKALNKEDHYVGHWKEGKMCGQGVYSYASGEV 1116          
BLAST of CX301065 vs. ExPASy Swiss-Prot
Match: MORN1_HUMAN (MORN repeat-containing protein 1 OS=Homo sapiens GN=MORN1 PE=2 SV=2)

HSP 1 Score: 62.003 bits (149), Expect = 1.359e-13
Identity = 31/97 (31.96%), Postives = 48/97 (49.48%), Query Frame = 3
Query:  372 YEGDWVNDKANGEGTYIHANGAQYTGDWRDDKQHGRGVETWPDGAKYDGEYADGKKNGKGTLYFADRSLYTGEFCNNDIQGYGVYVWPDERRYEGEW 662
            YEG+  +    G G  +  +G  Y G + D+K+HG G   + +G KYDG++   ++ G G L  AD S Y G++ ++   G G         Y G W
Sbjct:  109 YEGEVSHGMREGHGFLVDRDGQVYQGSFHDNKRHGPGQMLFQNGDKYDGDWVRDRRQGHGVLRCADGSTYKGQWHSDVFSGLGSMAHCSGVTYYGLW 205          

HSP 2 Score: 35.039 bits (79), Expect = 1.359e-13
Identity = 14/38 (36.84%), Postives = 23/38 (60.53%), Query Frame = 2
Query:  236 YIGQWRNGVRDGYGQQTWIDGSRYEGDWSSDKANGRGK 349
            Y G+W+ G + G+G+  + DGS YEG +   +  G G+
Sbjct:   39 YEGEWKAGRKHGHGKLLFKDGSYYEGAFVDGEITGEGR 76          

HSP 3 Score: 57.3806 bits (137), Expect = 2.410e-12
Identity = 28/102 (27.45%), Postives = 48/102 (47.06%), Query Frame = 3
Query:  366 EIYEGDWVNDKANGEGTYIHANGAQYTGDWRDDKQHGRGVETWPDGAKYDGEYADGKKNGKGTLYFADRSLYTGEFCNNDIQGYGVYVWPDERRYEGEWYKN 671
            + + G +V  +  G G   +  G  Y G+     + G G     DG  Y G + D K++G G + F +   Y G++  +  QG+GV    D   Y+G+W+ +
Sbjct:   84 DTFSGQFVLGEPQGYGVMEYKAGGCYEGEVSHGMREGHGFLVDRDGQVYQGSFHDNKRHGPGQMLFQNGDKYDGDWVRDRRQGHGVLRCADGSTYKGQWHSD 185          

HSP 4 Score: 35.4242 bits (80), Expect = 2.410e-12
Identity = 16/40 (40.00%), Postives = 24/40 (60.00%), Query Frame = 2
Query:  251 RNGVRDGYGQQTWIDGS-RYEGDWSSDKANGRGKLIHADG 367
            R   R+GYG   + +   RYEG+W + + +G GKL+  DG
Sbjct:   20 RRPPRNGYGVYVYPNSFFRYEGEWKAGRKHGHGKLLFKDG 59          

HSP 5 Score: 53.5286 bits (127), Expect = 9.305e-11
Identity = 24/78 (30.77%), Postives = 42/78 (53.85%), Query Frame = 3
Query:  366 EIYEGDWVNDKANGEGTYIHANGAQYTGDWRDDKQHGRGVETWPDGAKYDGEYADGKKNGKGTLYFADRSLYTGEFCN 599
            ++Y+G + ++K +G G  +  NG +Y GDW  D++ G GV    DG+ Y G++     +G G++       Y G + N
Sbjct:  130 QVYQGSFHDNKRHGPGQMLFQNGDKYDGDWVRDRRQGHGVLRCADGSTYKGQWHSDVFSGLGSMAHCSGVTYYGLWIN 207          

HSP 6 Score: 33.8834 bits (76), Expect = 9.305e-11
Identity = 17/50 (34.00%), Postives = 24/50 (48.00%), Query Frame = 2
Query:  224 NGAVYIGQWRNGVRDGYGQQTWIDGSRYEGDWSSDKANGRGKLIHADGDI 373
            +G  + GQ+  G   GYG   +  G  YEG+ S     G G L+  DG +
Sbjct:   82 SGDTFSGQFVLGEPQGYGVMEYKAGGCYEGEVSHGMREGHGFLVDRDGQV 131          
The following BLAST results are available for this feature:
BLAST of CX301065 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
MORN4_RAT9.949e-1434.82MORN repeat-containing protein 4 OS=Rattus norvegi... [more]
MORN4_BOVIN1.299e-1335.71MORN repeat-containing protein 4 OS=Bos taurus GN=... [more]
ALS2_MOUSE1.321e-1333.65Alsin OS=Mus musculus GN=Als2 PE=1 SV=2[more]
MORN1_HUMAN1.359e-1331.96MORN repeat-containing protein 1 OS=Homo sapiens G... [more]

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Properties
Property NameValue
Genbank descriptionC08005D02SK PhyRootSw1 Citrus sinensis cDNA clone C08005D02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX301065 ID=CX301065; Name=CX301065; organism=Citrus sinensis; type=EST; length=678bp
ACGAGGACAAATTGAAGTTCAAGAGCCACCTTACCAGTCTGGCCTTCAAC
AAGGAGGTGAACTTGAACCTACTAATACTGGAGAGATCAAACTATTATCA
TTTAACCCTGATGGAACAAATATAAACCCCTCAGCATCTACTGTGTCCAC
TAAGGACCAAAAGTTGATAGCGCAGACAATTGGCAAAGAGGAACGCATGG
AATTACAGCCAATTACCTTAGAAAATGGTGCAGTGTATATTGGACAATGG
AGAAATGGAGTTAGAGATGGTTATGGCCAACAGACCTGGATTGATGGGTC
TAGGTATGAAGGAGATTGGTCTAGTGATAAAGCTAATGGAAGAGGAAAGC
TAATACATGCAGATGGAGATATACGAAGGTGATTGGGTAAATGATAAAGC
CAATGGAGAAGGGACTTATATACATGCTAATGGAGCACAATATACAGGAG
ACTGGAGAGATGATAAACAGCATGGAAGAGGTGTGGAGACCTGGCCTGAT
GGTGCGAAATATGATGGAGAATATGCTGATGGTAAGAAGAATGGTAAAGG
AACGCTATACTTTGCTGATAGATCGTTGTATACGGGAGAATTTTGCAATA
ATGATATTCAGGGGTATGGTGTGTATGTATGGCCAGATGAGAGAAGATAT
GAAGGAGAATGGTATAAGAATAAAATGC
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