EY702468
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY702468 vs. ExPASy Swiss-Prot
Match: EPA2A_XENLA (Embryonic polyadenylate-binding protein 2-A OS=Xenopus laevis GN=epabp2-A PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.253e-23 Identity = 58/119 (48.74%), Postives = 81/119 (68.07%), Query Frame = 1 Query: 277 KEEADSRSVFVGNVDYACTPEEVQRDFQSCGTVNRVTILTDKF-GQPKGFAYVEFLEIDAVQEALQLNESELHGRQLKVLPKRTNVPGMKQ-----YRPR-RFNPYMGYRGRRPYVPPY 612 K+E D RSV+VGNVDY T ++++ F SCG++NR+TIL DKF G PKG+AY+EF E ++V A+ ++E+ GR +KVLPKRTN+PG+ +R R R N RG+RP P+ Sbjct: 87 KKEIDKRSVYVGNVDYGGTAQDLEAHFSSCGSINRITILCDKFSGHPKGYAYIEFAERNSVDAAVTMDETVFRGRTIKVLPKRTNMPGISSTDRGGFRGRPRGNRGNYQRGQRPRGRPF 205
BLAST of EY702468 vs. ExPASy Swiss-Prot
Match: EPAB2_HUMAN (Embryonic polyadenylate-binding protein 2 OS=Homo sapiens GN=PABPNL1 PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.363e-22 Identity = 62/136 (45.59%), Postives = 80/136 (58.82%), Query Frame = 1 Query: 208 QAKVEKEMGAAQ----DPANV----AANQANKEEADSRSVFVGNVDYACTPEEVQRDFQSCGTVNRVTILTDKF-GQPKGFAYVEFLEIDAVQEALQLNESELHGRQLKVLPKRTNVPGMKQYRPRRFNPYMGYRG 588 Q + E+E G A P V + K EAD RSV+VGNVDY + EE++ F CG V+RVTIL DKF G PKG+AY+EF +VQ A++L++S GR +KVLPKRTN PG+ + G RG Sbjct: 110 QQQAEEEEGTAAGQLLSPETVGCPLSGTPEEKVEADHRSVYVGNVDYGGSAEELEAHFSRCGEVHRVTILCDKFSGHPKGYAYIEFATKGSVQAAVELDQSLFRGRVIKVLPKRTNFPGISSTDRGGLRGHPGSRG 245
BLAST of EY702468 vs. ExPASy Swiss-Prot
Match: PABP2_DICDI (Polyadenylate-binding protein 2 OS=Dictyostelium discoideum GN=pabpn1 PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 2.000e-21 Identity = 57/109 (52.29%), Postives = 76/109 (69.72%), Query Frame = 1 Query: 274 NKEEADSRSVFVGNVDYACTPEEVQRDFQSCGTVNRVTILTDK-FGQPKGFAYVEFLEIDAVQEALQLNESELHGRQLKVLPKRTNVP-GMKQ-YRPRRFNPYMGYRGR 591 ++EE DSRSV+VGNVDY T +++ FQSCGTVNR+TIL+DK G PKG YVEF+ +++ A+ LN+S + RQLK+ PKRTN+P M+Q P + G RGR Sbjct: 94 DQEEIDSRSVYVGNVDYKSTHDQILAYFQSCGTVNRITILSDKTTGHPKGCCYVEFVNKESIINAMALNDSFFNERQLKITPKRTNLPYYMRQGVLPPGRGGFRGGRGR 202
BLAST of EY702468 vs. ExPASy Swiss-Prot
Match: EPAB2_RAT (Embryonic polyadenylate-binding protein 2 OS=Rattus norvegicus GN=Pabpnl1 PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 4.456e-21 Identity = 50/87 (57.47%), Postives = 64/87 (73.56%), Query Frame = 1 Query: 283 EADSRSVFVGNVDYACTPEEVQRDFQSCGTVNRVTILTDKF-GQPKGFAYVEFLEIDAVQEALQLNESELHGRQLKVLPKRTNVPGM 540 EAD RSV+VGNVDY + E++ F CG ++RVTIL DKF G PKG+AY+EF +VQ A++L+ES GR +KVLPKRTN PG+ Sbjct: 135 EADHRSVYVGNVDYGGSAAELEAYFSPCGEIHRVTILCDKFSGHPKGYAYIEFASKSSVQAAVRLDESTFRGRVIKVLPKRTNFPGI 221
BLAST of EY702468 vs. ExPASy Swiss-Prot
Match: EPAB2_MOUSE (Embryonic polyadenylate-binding protein 2 OS=Mus musculus GN=Pabpnl1 PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 2.211e-20 Identity = 50/87 (57.47%), Postives = 63/87 (72.41%), Query Frame = 1 Query: 283 EADSRSVFVGNVDYACTPEEVQRDFQSCGTVNRVTILTDKF-GQPKGFAYVEFLEIDAVQEALQLNESELHGRQLKVLPKRTNVPGM 540 EAD RSVFVGNVDY + E++ F CG ++RVTIL DKF G PKG+AY+EF +V+ A+ L+ES GR +KVLPKRTN PG+ Sbjct: 139 EADHRSVFVGNVDYGGSAAELEAYFSPCGEIHRVTILCDKFSGHPKGYAYIEFASHRSVKAAVGLDESTFRGRVIKVLPKRTNFPGI 225
BLAST of EY702468 vs. ExPASy Swiss-Prot
Match: SGN1_YEAST (RNA-binding protein SGN1 OS=Saccharomyces cerevisiae GN=SGN1 PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.433e-19 Identity = 59/147 (40.14%), Postives = 86/147 (58.50%), Query Frame = 1 Query: 271 ANKEEADSRSVFVGNVDYACTPEEVQRDFQSCGTVNRVTILTDK-FGQPKGFAYVEFLEIDAVQEALQLNESELHGRQLKVLPKRTNVPGMKQ--------YRPRRFN-PYMGYRG--RRPYVPPY--FYSP---YGYGKVPRFRRP 660 A++ EADSRS+FVGN+ TPE+++ F+ CG + R+T+L D+ G PKG+ Y+EF ++ALQLN EL G+++ V KRTN+PG + ++ ++N P M Y PY PPY SP +GY K +R P Sbjct: 56 AHQLEADSRSIFVGNITPDVTPEQIEDHFKDCGQIKRITLLYDRNTGTPKGYGYIEFESPAYREKALQLNGGELKGKKIAVSRKRTNIPGFNRHYNSQNQYFQQWQWNYPLMAYPNPDTFPYYPPYPPNQSPNQNFGYNKNNYYRSP 202
BLAST of EY702468 vs. ExPASy Swiss-Prot
Match: YQOC_CAEEL (Putative RNA-binding protein EEED8.12 OS=Caenorhabditis elegans GN=EEED8.12 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.256e-15 Identity = 46/112 (41.07%), Postives = 68/112 (60.71%), Query Frame = 1 Query: 208 QAKVEKEMGAAQDPANVAANQANKEEADSRSVFVGNVDYACTPEEVQRDFQSCGTVNRVTILTDKF-GQPKGFAYVEFLEIDAVQEALQLNESELHGRQLKVLPKRTNVPGM 540 Q K+ K + +A A V + ++ D++SVF+GNVD+ T EEV+ F+ CG + R TI DKF + K FAY+EF + +++ AL +N S R + V KRTN+PGM Sbjct: 35 QNKMAKNLESA---AYVPPTEEEQKAIDAKSVFIGNVDFNSTIEEVEEHFKGCGHIVRTTIPKDKFTKKQKNFAYIEFDDSSSIENALVMNGSLFRSRPIVVTAKRTNIPGM 143
BLAST of EY702468 vs. ExPASy Swiss-Prot
Match: YQO4_CAEEL (Putative RNA-binding protein EEED8.4 OS=Caenorhabditis elegans GN=EEED8.4 PE=2 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 2.798e-15 Identity = 44/112 (39.29%), Postives = 68/112 (60.71%), Query Frame = 1 Query: 208 QAKVEKEMGAAQDPANVAANQANKEEADSRSVFVGNVDYACTPEEVQRDFQSCGTVNRVTILTDKF-GQPKGFAYVEFLEIDAVQEALQLNESELHGRQLKVLPKRTNVPGM 540 Q K+ K + +A A V + ++ D++SVF+GNVD+ T EE++ F+ CG + + TI DKF + K FAY+EF + +++ AL +N S R + V KRTN+PGM Sbjct: 29 QNKMAKHLESA---AYVPPTEEEQKAIDAKSVFIGNVDFNSTIEEIEEHFKGCGQIVKTTIPKDKFTKKQKNFAYIEFDDSSSIENALVMNGSLFRSRPIVVTAKRTNIPGM 137
BLAST of EY702468 vs. ExPASy Swiss-Prot
Match: RBM34_HUMAN (RNA-binding protein 34 OS=Homo sapiens GN=RBM34 PE=1 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 7.131e-11 Identity = 36/76 (47.37%), Postives = 48/76 (63.16%), Query Frame = 1 Query: 289 DSRSVFVGNVDYACTPEEVQRDFQSCGTVNRVTILTDKF-GQPKGFAYVEFLEIDAVQEALQLNESELHGRQLKVL 513 D RSVFVGN+ Y +++ F CG++ V I+ DK G KGF YV F D+V AL+LN SEL GR+L+V+ Sbjct: 285 DKRSVFVGNLPYKVEESAIEKHFLDCGSIMAVRIVRDKMTGIGKGFGYVLFENTDSVHLALKLNNSELMGRKLRVM 360 The following BLAST results are available for this feature:
BLAST of EY702468 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY702468 ID=EY702468; Name=EY702468; organism=Citrus sinensis; type=EST; length=874bpback to top |