CX301033
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX301033 vs. ExPASy Swiss-Prot
Match: RL23_AEDAE (60S ribosomal protein L23 OS=Aedes aegypti GN=RpL23-A PE=2 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 1.401e-57 Identity = 102/136 (75.00%), Postives = 126/136 (92.65%), Query Frame = 3 Query: 75 KGRGGAVGLKFRTTLGLPVGAVVNCADNTGAKSLMIISVYGIKGRLNKLPSASVGDLVMASCKKGKPELRKKVHPAVIVRQRKTWRRKEGLYIYFEDNAGVIVNNKGEMKGSAVAGPVAKECADLWPRIASNSGSI 482 +GRGG+ G KFR +LGLPVGAV+NCADNTGAK+L +I+V+GI+GRLN+LP+A VGD+ +A+ KKGKPELRKKV PAV++RQRK +RR++G+++YFEDNAGVIVNNKGEMKGSA+ GPVAKECADLWPRIASN+GSI Sbjct: 4 RGRGGSAGGKFRISLGLPVGAVINCADNTGAKNLYVIAVHGIRGRLNRLPAAGVGDMFVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNAGSI 139
BLAST of CX301033 vs. ExPASy Swiss-Prot
Match: RL23_DROME (60S ribosomal protein L23 OS=Drosophila melanogaster GN=RpL23 PE=1 SV=2) HSP 1 Score: 219.935 bits (559), Expect = 9.079e-57 Identity = 102/136 (75.00%), Postives = 124/136 (91.18%), Query Frame = 3 Query: 75 KGRGGAVGLKFRTTLGLPVGAVVNCADNTGAKSLMIISVYGIKGRLNKLPSASVGDLVMASCKKGKPELRKKVHPAVIVRQRKTWRRKEGLYIYFEDNAGVIVNNKGEMKGSAVAGPVAKECADLWPRIASNSGSI 482 +GRGG G KFR +LGLPVGAV+NCADNTGAK+L +I+V+GI+GRLN+LP+A VGD+ +A+ KKGKPELRKKV PAV++RQRK +RR++G++IYFEDNAGVIVNNKGEMKGSA+ GPVAKECADLWPRIASN+ SI Sbjct: 4 RGRGGTAGGKFRISLGLPVGAVMNCADNTGAKNLYVIAVHGIRGRLNRLPAAGVGDMFVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNASSI 139
BLAST of CX301033 vs. ExPASy Swiss-Prot
Match: RL23_TOBAC (60S ribosomal protein L23 OS=Nicotiana tabacum GN=RPL23 PE=2 SV=1) HSP 1 Score: 217.238 bits (552), Expect = 5.885e-56 Identity = 102/137 (74.45%), Postives = 121/137 (88.32%), Query Frame = 3 Query: 75 KGRGGAVGLKFRTTLGLPVGAVVNCADNTGAKSLMIISVYGIKGRLNKLPSASVGDLVMASCKKGKPELRKKVHPAVIVRQRKTWRRKEGLYIYFEDNAGVIVNNKGEMKGSAVAGPVAKECADLWPRIASNSGSIL 485 +GRGG+ G KFR +LGLPV A +NCADNTGAK+L IISV GIKGRLN+LPSA VGD+VMA+ KKGKP+LRKKV PAV+VRQRK WRRK+G+++YFEDNAGVIVN KGEMKGSA+ GP+ KECADLWPRIAS + +I+ Sbjct: 4 RGRGGSAGNKFRMSLGLPVAATINCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVVVRQRKPWRRKDGVFMYFEDNAGVIVNAKGEMKGSAITGPIGKECADLWPRIASAANAIV 140
BLAST of CX301033 vs. ExPASy Swiss-Prot
Match: RL23_SCHPO (60S ribosomal protein L23 OS=Schizosaccharomyces pombe GN=rpl23a PE=2 SV=1) HSP 1 Score: 217.238 bits (552), Expect = 5.885e-56 Identity = 98/139 (70.50%), Postives = 123/139 (88.49%), Query Frame = 3 Query: 69 MGKGRGGAVGLKFRTTLGLPVGAVVNCADNTGAKSLMIISVYGIKGRLNKLPSASVGDLVMASCKKGKPELRKKVHPAVIVRQRKTWRRKEGLYIYFEDNAGVIVNNKGEMKGSAVAGPVAKECADLWPRIASNSGSIL 485 M +GRG A G K+R TLGLPV A++NCADN+GAK+L I+SV+G RLN+LP+AS GD+V+A+ KKGKP+LRKK+ PA++VRQRK WRRK+G+Y+YFEDNAGVIVN KGEMKGSA+ GPVAKECADLWPRIASN+G+++ Sbjct: 1 MSRGRGAASGTKYRMTLGLPVQAIMNCADNSGAKNLYIVSVFGTGARLNRLPAASCGDMVLATVKKGKPDLRKKIMPAIVVRQRKAWRRKDGVYLYFEDNAGVIVNPKGEMKGSAITGPVAKECADLWPRIASNAGTVV 139
BLAST of CX301033 vs. ExPASy Swiss-Prot
Match: RL23_BRUMA (60S ribosomal protein L23 OS=Brugia malayi GN=RPL23 PE=2 SV=1) HSP 1 Score: 217.238 bits (552), Expect = 5.885e-56 Identity = 106/136 (77.94%), Postives = 120/136 (88.24%), Query Frame = 3 Query: 75 KGRGGAVGLKFRTTLGLPVGAVVNCADNTGAKSLMIISVYGIKGRLNKLPSASVGDLVMASCKKGKPELRKKVHPAVIVRQRKTWRRKEGLYIYFEDNAGVIVNNKGEMKGSAVAGPVAKECADLWPRIASNSGSI 482 +GRGGA G KFR +LGLPVGAV+NCADNTGAK+L +I+V GIKGRLN+LPSA VGD+ +AS KKGKPELRKKV AV+VRQRK +RR +G IYFEDNAGVIVNNKGEMKGSA+ GPV KECADLWPRIASN+GSI Sbjct: 4 RGRGGASGAKFRISLGLPVGAVMNCADNTGAKNLFVIAVSGIKGRLNRLPSAGVGDMFVASVKKGKPELRKKVLQAVVVRQRKQYRRIDGSSIYFEDNAGVIVNNKGEMKGSAITGPVTKECADLWPRIASNAGSI 139
BLAST of CX301033 vs. ExPASy Swiss-Prot
Match: RL23_ARATH (60S ribosomal protein L23 OS=Arabidopsis thaliana GN=RPL23A PE=2 SV=3) HSP 1 Score: 216.468 bits (550), Expect = 1.004e-55 Identity = 104/137 (75.91%), Postives = 120/137 (87.59%), Query Frame = 3 Query: 75 KGRGGAVGLKFRTTLGLPVGAVVNCADNTGAKSLMIISVYGIKGRLNKLPSASVGDLVMASCKKGKPELRKKVHPAVIVRQRKTWRRKEGLYIYFEDNAGVIVNNKGEMKGSAVAGPVAKECADLWPRIASNSGSIL 485 +GRGG G KFR +LGLPV A VNCADNTGAK+L IISV GIKGRLN+LPSA VGD+VMA+ KKGKP+LRKKV PAVIVRQRK WRRK+G+++YFEDNAGVIVN KGEMKGSA+ GP+ KECADLWPRIAS + +I+ Sbjct: 4 RGRGGTSGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 140
BLAST of CX301033 vs. ExPASy Swiss-Prot
Match: RL23_TORRU (60S ribosomal protein L23 OS=Tortula ruralis GN=RPL23 PE=2 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 4.663e-53 Identity = 99/137 (72.26%), Postives = 121/137 (88.32%), Query Frame = 3 Query: 75 KGRGGAVGLKFRTTLGLPVGAVVNCADNTGAKSLMIISVYGIKGRLNKLPSASVGDLVMASCKKGKPELRKKVHPAVIVRQRKTWRRKEGLYIYFEDNAGVIVNNKGEMKGSAVAGPVAKECADLWPRIASNSGSIL 485 +GRGG+ G KFR +LGLPVGAVVNCADNTGAK+L +IS G++GRLN+LP+A+VGD+VMA+ KKGKP+LRKKV PAVIVRQRK WRRK+G+++YFEDNAGVIVN KGEM SA+ GP+ KECADLWPRIAS + +I+ Sbjct: 4 RGRGGSSGNKFRMSLGLPVGAVVNCADNTGAKNLYVISS-GVRGRLNRLPAAAVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMNPSAITGPIGKECADLWPRIASAANAIV 139
BLAST of CX301033 vs. ExPASy Swiss-Prot
Match: RL23_YEAST (60S ribosomal protein L23 OS=Saccharomyces cerevisiae GN=RPL23A PE=1 SV=3) HSP 1 Score: 204.142 bits (518), Expect = 5.156e-52 Identity = 93/133 (69.92%), Postives = 117/133 (87.97%), Query Frame = 3 Query: 87 GAVGLKFRTTLGLPVGAVVNCADNTGAKSLMIISVYGIKGRLNKLPSASVGDLVMASCKKGKPELRKKVHPAVIVRQRKTWRRKEGLYIYFEDNAGVIVNNKGEMKGSAVAGPVAKECADLWPRIASNSGSIL 485 GA G KFR +LGLPVGA++NCADN+GA++L II+V G RLN+LP+AS+GD+VMA+ KKGKPELRKKV PA++VRQ K+WRR++G+++YFEDNAGVI N KGEMKGSA+ GPV KECADLWPR+ASNSG ++ Sbjct: 5 GAQGTKFRISLGLPVGAIMNCADNSGARNLYIIAVKGSGSRLNRLPAASLGDMVMATVKKGKPELRKKVMPAIVVRQAKSWRRRDGVFLYFEDNAGVIANPKGEMKGSAITGPVGKECADLWPRVASNSGVVV 137
BLAST of CX301033 vs. ExPASy Swiss-Prot
Match: RL23_DICDI (60S ribosomal protein L23 OS=Dictyostelium discoideum GN=rpl23 PE=3 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 2.648e-48 Identity = 90/132 (68.18%), Postives = 116/132 (87.88%), Query Frame = 3 Query: 90 AVGLKFRTTLGLPVGAVVNCADNTGAKSLMIISVYGIKGRLNKLPSASVGDLVMASCKKGKPELRKKVHPAVIVRQRKTWRRKEGLYIYFEDNAGVIVNNKGEMKGSAVAGPVAKECADLWPRIASNSGSIL 485 AVG +R +LGLPVGAV+N ADN+GAK+L +I+V GIKGRLN+LPSA VGD+VMA+ KKGKPELRKKV ++VRQRK W+RK+G+YIYFEDNAGV+ N KGE+KG+ + GPVAKEC+DLWP++A+N+G+I+ Sbjct: 6 AVGSNYRVSLGLPVGAVMNSADNSGAKNLYVIAVKGIKGRLNRLPSAGVGDMVMATVKKGKPELRKKVCTGLVVRQRKHWKRKDGVYIYFEDNAGVMCNPKGEVKGN-ILGPVAKECSDLWPKVATNAGTIV 136
BLAST of CX301033 vs. ExPASy Swiss-Prot
Match: RL23_TRYCR (60S ribosomal protein L23 OS=Trypanosoma cruzi GN=RPL23 PE=2 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 2.171e-42 Identity = 89/141 (63.12%), Postives = 113/141 (80.14%), Query Frame = 3 Query: 69 MGKGRGGAVGLKFRTTLGLPVGAVVNCADNTGAKSLMIISVYGIKGRLNKLPSASVGDLVMASCKKGKPELRKKVHPAVIVRQRKTWRRKEGLYIYFEDNAGVIVNNKG-EMKGSAVAGPVAKECA-DLWPRIASNSGSIL 485 MGK + G +FR +L LPVGAVVNCADNTGAK+L IISV G GRLN+LP+A++GD+VMAS KKGKPELR+KV AVI+RQRK+WRRK+G IYFEDNAGVIVN++G + + S +AGPVAKE P+I+S++ +I+ Sbjct: 1 MGKEKANVKGCRFRVSLALPVGAVVNCADNTGAKNLYIISVKGYHGRLNRLPAAALGDIVMASVKKGKPELRRKVLNAVIIRQRKSWRRKDGTVIYFEDNAGVIVNSQGRDGRVSGIAGPVAKEAGRPSGPKISSHAPAIV 141 The following BLAST results are available for this feature:
BLAST of CX301033 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX301033 ID=CX301033; Name=CX301033; organism=Citrus sinensis; type=EST; length=663bpback to top |