CX301031

Overview
NameCX301031
Unique NameCX301031
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length741
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX301031 vs. ExPASy Swiss-Prot
Match: EF2_CRIGR (Elongation factor 2 OS=Cricetulus griseus GN=EEF2 PE=3 SV=3)

HSP 1 Score: 241.121 bits (614), Expect = 4.675e-63
Identity = 114/171 (66.67%), Postives = 138/171 (80.70%), Query Frame = 2
Query:   17 KEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEFEDKL 529
            KEGAL EENMRG+ F+V DV LHADAIHR GGQ+IPTARR +YAS LTA+PRL+EP+Y+VEIQ PEQ +GGIY VLN+KRGHVFEE Q  GTP++ +KAYLPV ESFGF+  LR+ T GQAFPQCVFDHW ++  DP +  ++ +Q+VA+ RKRKGLKE +  L  F DKL
Sbjct:  688 KEGALCEENMRGVRFDVHDVTLHADAIHRRGGQIIPTARRCLYASVLTAQPRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDPFDNSSRGSQVVAETRKRKGLKEGIPALDNFLDKL 858          
BLAST of CX301031 vs. ExPASy Swiss-Prot
Match: EF2_CHICK (Elongation factor 2 OS=Gallus gallus GN=EEF2 PE=1 SV=3)

HSP 1 Score: 240.736 bits (613), Expect = 6.106e-63
Identity = 113/171 (66.08%), Postives = 137/171 (80.12%), Query Frame = 2
Query:   17 KEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEFEDKL 529
            KEG L EENMRG+ F+V DV LHADAIHRGGGQ+IPTARR +YA  LTA+PRL+EP+Y+VEIQ PEQ +GGIY VLN+KRGHVFEE Q  GTP++ +KAYLPV ESFGF+  LR+ T GQAFPQCVFDHW ++  DP +  ++ +Q+VA+ RKRKGLKE +  L  F DKL
Sbjct:  688 KEGVLCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYACVLTAQPRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDPFDSASRPSQVVAETRKRKGLKEGIPALDNFLDKL 858          
BLAST of CX301031 vs. ExPASy Swiss-Prot
Match: EF2_SCHPO (Elongation factor 2 OS=Schizosaccharomyces pombe GN=eft1 PE=1 SV=2)

HSP 1 Score: 239.195 bits (609), Expect = 1.777e-62
Identity = 115/171 (67.25%), Postives = 136/171 (79.53%), Query Frame = 2
Query:   17 KEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEFEDKL 529
            KEG + EEN+R   F + DVVLHADAIHRGGGQ+IPTARRV+YAS L A P + EPV++VEIQ  E A+GGIYSVLN+KRGHVF E QR GTPLYNIKAYLPV ESFGF+G LR AT+GQAFPQ VFDHW  MS DPL+P ++  Q+V + RKRKGLKE +   +E+ D+L
Sbjct:  672 KEGPMFEENLRSCRFNILDVVLHADAIHRGGGQIIPTARRVVYASTLLASPIIQEPVFLVEIQVSENAMGGIYSVLNKKRGHVFSEEQRVGTPLYNIKAYLPVNESFGFTGELRQATAGQAFPQLVFDHWSPMSGDPLDPTSKPGQIVCEARKRKGLKENVPDYTEYYDRL 842          
BLAST of CX301031 vs. ExPASy Swiss-Prot
Match: EF2_DROME (Elongation factor 2 OS=Drosophila melanogaster GN=Ef2b PE=1 SV=4)

HSP 1 Score: 236.113 bits (601), Expect = 1.504e-61
Identity = 110/171 (64.33%), Postives = 136/171 (79.53%), Query Frame = 2
Query:   17 KEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEFEDKL 529
            KEG LA+EN+RG+ F + DV LHADAIHRGGGQ+IPT RR +YA+ +TAKPRL+EPVY+ EIQ PE A+GGIY VLN++RGHVFEE Q  GTP++ +KAYLPV ESFGF+  LR+ T GQAFPQCVFDHW ++  DP EP ++   +V D RKRKGLKE +  LS++ DKL
Sbjct:  674 KEGILADENLRGVRFNIYDVTLHADAIHRGGGQIIPTTRRCLYAAAITAKPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEENQVVGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDPSEPSSKPYAIVQDTRKRKGLKEGLPDLSQYLDKL 844          
BLAST of CX301031 vs. ExPASy Swiss-Prot
Match: EF2_BOMMO (Translation elongation factor 2 OS=Bombyx mori GN=tef2 PE=1 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 4.838e-60
Identity = 107/171 (62.57%), Postives = 134/171 (78.36%), Query Frame = 2
Query:   17 KEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEFEDKL 529
            KEG +AEEN+RG+ F + DV LH DAIHRGGGQ+IPT RR +YA  LTA+PRL+EPVY+ EIQ PE A+GGIY VLN++RGHVFEE Q  GTP++ +KAYLPV ESFGF+  LR+ T GQAFPQCVFDHW ++  DP EP ++   +V + RKRKGLKE +  L+++ DKL
Sbjct:  674 KEGVMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDPCEPQSKPYNVVQETRKRKGLKEGLPDLTQYLDKL 844          
BLAST of CX301031 vs. ExPASy Swiss-Prot
Match: EF2_NEUCR (Elongation factor 2 OS=Neurospora crassa GN=cot-3 PE=3 SV=3)

HSP 1 Score: 228.794 bits (582), Expect = 2.401e-59
Identity = 109/172 (63.37%), Postives = 136/172 (79.07%), Query Frame = 2
Query:   17 KEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMM-SSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEFEDKL 529
            +EG + EE MR I F + DV LHADAIHRGGGQ+IPTARRV+YA+ L A+P LLEPV++VEIQ PEQA+GG+Y VL ++RGHVF E QRPGTPL+ IKAYLPV+ESFGF+G LRAATSGQAFPQ VFDHW+ +    PL+  ++  Q+V ++RKRKGLK ++     + DKL
Sbjct:  673 REGPIGEEPMRSIRFNILDVTLHADAIHRGGGQIIPTARRVLYAATLLAEPSLLEPVFLVEIQVPEQAMGGVYGVLTRRRGHVFGEEQRPGTPLFTIKAYLPVMESFGFNGDLRAATSGQAFPQSVFDHWERLPGGSPLDSTSKVGQIVQEMRKRKGLKVEVPGYENYYDKL 844          
BLAST of CX301031 vs. ExPASy Swiss-Prot
Match: EF2_CRYPV (Elongation factor 2 OS=Cryptosporidium parvum PE=3 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 2.655e-58
Identity = 105/171 (61.40%), Postives = 134/171 (78.36%), Query Frame = 2
Query:   17 KEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEFEDKL 529
            KEG L EE+MRGI F + DV LHADAIHRG GQ+ PT RRV+YA+ LTA PRLLEP+++VEI AP++ +GGIY+ LNQ+RGHVF E  + GTP   IKAYLPV +SF F+  LRAATSG+AFPQCVFDHW++++ DPLE G++  +LV  IR+RK +KE++  L  + DKL
Sbjct:  662 KEGILCEEDMRGIRFNLLDVTLHADAIHRGAGQITPTCRRVMYAAALTASPRLLEPMFLVEISAPQEVVGGIYATLNQRRGHVFHEEPKSGTPQVEIKAYLPVADSFKFTTVLRAATSGKAFPQCVFDHWELINGDPLEKGSKTEELVKAIRRRKNIKEEIPALDNYLDKL 832          
BLAST of CX301031 vs. ExPASy Swiss-Prot
Match: EF2_KLULA (Elongation factor 2 OS=Kluyveromyces lactis GN=EFT1 PE=3 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 2.247e-57
Identity = 104/171 (60.82%), Postives = 130/171 (76.02%), Query Frame = 2
Query:   17 KEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEFEDKL 529
            KEG +  E MR +   + DV LHADAIHRGGGQ+IPT RR  YA  L A+P++ EPV++VEIQ PEQA+GGIYSVLN+KRG V  E QRPGTPL+ +KAYLP+ ESFGF+G LR AT GQAFPQ VFDHW  + +DPL+P T+A ++V   RKR+G+KE++    E+ DKL
Sbjct:  672 KEGPIFGEQMRSVRVNILDVTLHADAIHRGGGQIIPTMRRATYAGFLLAEPKIQEPVFLVEIQCPEQAIGGIYSVLNKKRGQVVSEEQRPGTPLFTVKAYLPINESFGFTGELRQATGGQAFPQMVFDHWATLGTDPLDPSTKAGEIVLAARKRQGMKEEVPGWQEYYDKL 842          
BLAST of CX301031 vs. ExPASy Swiss-Prot
Match: EF2_SACKL (Elongation factor 2 OS=Saccharomyces kluyveri GN=EFT2 PE=3 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 5.007e-57
Identity = 105/171 (61.40%), Postives = 129/171 (75.44%), Query Frame = 2
Query:   17 KEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEFEDKL 529
            KEG +  E MR +   + DV LHADAIHRGGGQ+IPT RR  YA  L A+P++ EPV++VEIQ PEQA+GGIYSVLN+KRG V  E QRPGTPL+ +KAYLPV ESFGF+G LR AT GQAFPQ VFDHW  + +DPL+P T+A ++V   RKR G+KE++    E+ DKL
Sbjct:  672 KEGPIFGEQMRSVRVNILDVTLHADAIHRGGGQIIPTMRRATYAGFLLAEPKIQEPVFLVEIQCPEQAVGGIYSVLNRKRGQVVSEEQRPGTPLFTVKAYLPVNESFGFTGELRQATGGQAFPQMVFDHWATLGTDPLDPTTKAGEIVTAARKRHGMKEEVPGWQEYYDKL 842          
BLAST of CX301031 vs. ExPASy Swiss-Prot
Match: EF2_YEAST (Elongation factor 2 OS=Saccharomyces cerevisiae GN=EFT1 PE=1 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 8.540e-57
Identity = 105/171 (61.40%), Postives = 128/171 (74.85%), Query Frame = 2
Query:   17 KEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEFEDKL 529
            KEG +  E MR +   + DV LHADAIHRGGGQ+IPT RR  YA  L A P++ EPV++VEIQ PEQA+GGIYSVLN+KRG V  E QRPGTPL+ +KAYLPV ESFGF+G LR AT GQAFPQ VFDHW  + SDPL+P ++A ++V   RKR G+KE++    E+ DKL
Sbjct:  672 KEGPIFGEEMRSVRVNILDVTLHADAIHRGGGQIIPTMRRATYAGFLLADPKIQEPVFLVEIQCPEQAVGGIYSVLNKKRGQVVSEEQRPGTPLFTVKAYLPVNESFGFTGELRQATGGQAFPQMVFDHWSTLGSDPLDPTSKAGEIVLAARKRHGMKEEVPGWQEYYDKL 842          
The following BLAST results are available for this feature:
BLAST of CX301031 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 100
Match NameE-valueIdentityDescription
EF2_CRIGR4.675e-6366.67Elongation factor 2 OS=Cricetulus griseus GN=EEF2 ... [more]
EF2_CHICK6.106e-6366.08Elongation factor 2 OS=Gallus gallus GN=EEF2 PE=1 ... [more]
EF2_SCHPO1.777e-6267.25Elongation factor 2 OS=Schizosaccharomyces pombe G... [more]
EF2_DROME1.504e-6164.33Elongation factor 2 OS=Drosophila melanogaster GN=... [more]
EF2_BOMMO4.838e-6062.57Translation elongation factor 2 OS=Bombyx mori GN=... [more]
EF2_NEUCR2.401e-5963.37Elongation factor 2 OS=Neurospora crassa GN=cot-3 ... [more]
EF2_CRYPV2.655e-5861.40Elongation factor 2 OS=Cryptosporidium parvum PE=3... [more]
EF2_KLULA2.247e-5760.82Elongation factor 2 OS=Kluyveromyces lactis GN=EFT... [more]
EF2_SACKL5.007e-5761.40Elongation factor 2 OS=Saccharomyces kluyveri GN=E... [more]
EF2_YEAST8.540e-5761.40Elongation factor 2 OS=Saccharomyces cerevisiae GN... [more]

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Properties
Property NameValue
Genbank descriptionC08005A02SK PhyRootSw1 Citrus sinensis cDNA clone C08005A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX301031 ID=CX301031; Name=CX301031; organism=Citrus sinensis; type=EST; length=741bp
GGAATTCGGCACGAGGAAAGAAGGTGCGCTGGCTGAAGAGAACATGAGAG
GTATCTGCTTTGAAGTATGTGATGTTGTTCTTCACGCTGATGCCATTCAC
AGAGGTGGTGGTCAAGTCATTCCTACTGCTAGGAGGGTCATATATGCTTC
CCAGCTCACAGCCAAGCCCAGGCTTCTTGAGCCTGTCTACATGGTCGAAA
TACAGGCTCCCGAGCAGGCCCTTGGTGGTATTTACAGTGTTCTCAATCAG
AAACGTGGTCACGTGTTCGAGGAAATGCAGAGACCTGGTACCCCCCTTTA
CAACATCAAGGCTTACCTTCCCGTCATCGAGTCCTTTGGATTCTCAGGCA
CTTTGAGGGCTGCAACGTCAGGACAGGCCTTCCCACAATGTGTGTTTGAT
CACTGGGACATGATGTCATCCGATCCACTGGAGCCTGGTACACAGGCTGC
ACAGCTTGTTGCTGATATCAGGAAGAGGAAGGGCTTGAAGGAGCAAATGA
CACCACTATCTGAGTTTGAGGACAAGCTGTAAACATTTCGTCTTGACATC
AAGGGTGAGATTGCGCAGCTTGTTGCTGATATCAGGAAGAGGGAGCAAAT
GACACCGCTATCCGAGTAGAGGACGAGCTGTAAACATTTCATCTTGACAT
CAAGGGTGAGATTGCGCAGCAATATTTTTTGCTGATGCTTATTTTTGTTT
CAAGTTTTTCATATCCTCATTGTGTTTAGTAAAGTATATTA
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