CX301031

Overview
NameCX301031
Unique NameCX301031
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length741
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX301031 vs. ExPASy Swiss-Prot
Match: EF2_PICPA (Elongation factor 2 OS=Pichia pastoris GN=EFT1 PE=3 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 1.903e-56
Identity = 103/171 (60.23%), Postives = 130/171 (76.02%), Query Frame = 2
Query:   17 KEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEFEDKL 529
            KEG +  ENMR +   + DV LHADAIHRGGGQVIPT +RV YA+ L A+P + EP+++VEIQ PE A+GGIYSVLN+KRG V  E QRPGTPL+ +KAYLPV ESFGF+G LR AT+GQAFPQ VFDHW  M+ +PL+P ++  ++V   RKR+G+KE +    E+ DKL
Sbjct:  672 KEGPILGENMRSVRVNILDVTLHADAIHRGGGQVIPTMKRVTYAAFLLAEPAIQEPIFLVEIQCPENAIGGIYSVLNKKRGQVISEEQRPGTPLFTVKAYLPVNESFGFTGELRQATAGQAFPQMVFDHWANMNGNPLDPASKVGEIVLAARKRQGMKENVPGYEEYYDKL 842          
BLAST of CX301031 vs. ExPASy Swiss-Prot
Match: EF2_ASHGO (Elongation factor 2 OS=Ashbya gossypii GN=EFT1 PE=3 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 2.485e-56
Identity = 104/171 (60.82%), Postives = 128/171 (74.85%), Query Frame = 2
Query:   17 KEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEFEDKL 529
            KEG +  E MR +   + DV LHADAIHRG GQ++PT RR  YA  L A+P++ EPV++VEIQ PEQA+GGIYSVLN+KRG V  E QRPGTPL+ +KAYLPV ESFGF+G LR AT GQAFPQ VFDHW  + +DPL+P T+A ++V + RKR GLKE +    E+ DKL
Sbjct:  672 KEGPIFGEQMRSVRINLLDVTLHADAIHRGAGQIMPTMRRATYAGFLLAEPKIQEPVFLVEIQCPEQAVGGIYSVLNRKRGQVVSEEQRPGTPLFTVKAYLPVNESFGFTGELRQATGGQAFPQMVFDHWATLGTDPLDPTTKAGEIVVEARKRHGLKENVPGWQEYYDKL 842          
BLAST of CX301031 vs. ExPASy Swiss-Prot
Match: EF2_CANGA (Elongation factor 2 OS=Candida glabrata GN=EFT1 PE=3 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 4.238e-56
Identity = 103/171 (60.23%), Postives = 129/171 (75.44%), Query Frame = 2
Query:   17 KEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEFEDKL 529
            KEG +  E MR +   + DV LHADAIHRG GQ++PT RR  YA  L A+P++ EPV++VEIQ PEQA+GGIYSVLN+KRG V  E QRPGTPL+ +KAYLPV ESFGF+G LR AT GQAFPQ VFDHW  ++SDPL+P ++A ++V   RKR G+KE++    E+ DKL
Sbjct:  672 KEGPILGETMRSVRVNILDVTLHADAIHRGAGQIMPTMRRATYAGFLLAEPKIQEPVFLVEIQCPEQAVGGIYSVLNKKRGQVVSEEQRPGTPLFTVKAYLPVNESFGFTGELRQATGGQAFPQMVFDHWATLNSDPLDPTSKAGEIVTAARKRHGMKEEVPGWQEYYDKL 842          
BLAST of CX301031 vs. ExPASy Swiss-Prot
Match: EF2_SACCA (Elongation factor 2 OS=Saccharomyces castellii GN=EFT1 PE=3 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 7.230e-56
Identity = 104/171 (60.82%), Postives = 127/171 (74.27%), Query Frame = 2
Query:   17 KEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEFEDKL 529
            KEG +  E MR +   + DV LHADAIHRGGGQ+IPT RR  YA  L A+P++ EPV++VEIQ PE A+GGIYSVLN+KRG V  E QRPGTPL+ +KAYLPV ESFGF+G LR AT GQAFPQ VFDHW  + SDPL+P ++A ++V   RKR G+KE +    E+ DKL
Sbjct:  672 KEGPIFGEQMRSVRVNILDVTLHADAIHRGGGQIIPTMRRATYAGFLLAEPKIQEPVFLVEIQCPESAVGGIYSVLNKKRGQVVSEEQRPGTPLFTVKAYLPVNESFGFTGELRQATGGQAFPQMVFDHWATLGSDPLDPTSKAGEIVTAARKRHGMKEVVPGWQEYYDKL 842          
BLAST of CX301031 vs. ExPASy Swiss-Prot
Match: EF2_DEBHA (Elongation factor 2 OS=Debaryomyces hansenii GN=EFT1 PE=3 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 7.993e-55
Identity = 100/171 (58.48%), Postives = 127/171 (74.27%), Query Frame = 2
Query:   17 KEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEFEDKL 529
            KEG +  EN+R +   + DV LHADAIHRGGGQ+IPT RRV YAS L A+P + EPV++VEIQ PE A+GGIYSVLN+KRG V  E QRPGTPL+ +KAYLPV ESFGFSG LR +T GQAFPQ +FDHW  ++ DP +P ++   +V + R+R+G+K  +    E+ DKL
Sbjct:  672 KEGPIFGENVRSVRVNILDVTLHADAIHRGGGQIIPTMRRVTYASMLLAEPAIQEPVFLVEIQCPENAIGGIYSVLNKKRGQVISEEQRPGTPLFTVKAYLPVNESFGFSGELRQSTGGQAFPQLIFDHWANLNGDPTDPTSKVGTIVKEKRERQGMKPDVPGYEEYYDKL 842          
BLAST of CX301031 vs. ExPASy Swiss-Prot
Match: EF2_CANAL (Elongation factor 2 OS=Candida albicans GN=EFT2 PE=1 SV=2)

HSP 1 Score: 211.46 bits (537), Expect = 3.967e-54
Identity = 101/171 (59.06%), Postives = 125/171 (73.10%), Query Frame = 2
Query:   17 KEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEFEDKL 529
            KEG +  EN R +   + DV LHADAIHRGGGQ+IPT RRV YAS L A+P + EPV++VEIQ PE A+GGIYSVLN+KRG V  E QRPGTPL+ +KAYLPV ESFGF+G LR AT GQAFPQ +FDHW +MS D  +  ++   +V + R R GLK ++   +E+ DKL
Sbjct:  672 KEGPIFGENCRSVRVNILDVTLHADAIHRGGGQIIPTMRRVTYASMLLAEPAIQEPVFLVEIQCPENAIGGIYSVLNKKRGQVISEEQRPGTPLFTVKAYLPVNESFGFTGELRQATGGQAFPQLIFDHWQVMSGDVTDENSKPGAIVKEKRVRAGLKPEVPEYTEYYDKL 842          
BLAST of CX301031 vs. ExPASy Swiss-Prot
Match: EF2_PICGU (Elongation factor 2 OS=Pichia guilliermondii GN=EFT2 PE=3 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 5.181e-54
Identity = 102/171 (59.65%), Postives = 126/171 (73.68%), Query Frame = 2
Query:   17 KEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEFEDKL 529
            KEG +  EN+R +   + DV LHADAIHRGGGQ+IPT RRV YAS L A+P + EPV++VEIQ PE A+GGIYSVLN+KRG V  E QRPGTPL+ +KAYLPV ESFGFSG LR AT GQAFPQ VFDHW ++S D  +P ++   +    R+R+GLK ++    E+ DKL
Sbjct:  672 KEGPIFGENVRSVRVNILDVTLHADAIHRGGGQIIPTMRRVTYASMLLAEPAIQEPVFLVEIQCPENAIGGIYSVLNKKRGQVVSEEQRPGTPLFTVKAYLPVNESFGFSGDLRQATGGQAFPQLVFDHWAVLSGDVTDPTSKPGIIAKAKRERQGLKPEVPGYEEYYDKL 842          
BLAST of CX301031 vs. ExPASy Swiss-Prot
Match: EF2_DICDI (Elongation factor 2 OS=Dictyostelium discoideum GN=efbA PE=1 SV=2)

HSP 1 Score: 209.149 bits (531), Expect = 1.969e-53
Identity = 101/171 (59.06%), Postives = 131/171 (76.61%), Query Frame = 2
Query:   17 KEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEFEDKL 529
            KEG + +ENMRGI F + DV LH DAIHRGGGQ+IPTARRV+YA++LTA P LLEP+Y+VEI APE A+GGIYSVLN++RG V  E +R G+PL+++KA+LPV+ESFGF+  LR+ T+GQAFPQCVFDHW   S   +    +A ++    RKRKGL  ++  L +F +KL
Sbjct:  671 KEGVVCDENMRGIRFNLYDVTLHTDAIHRGGGQIIPTARRVLYAAELTASPTLLEPIYLVEITAPENAIGGIYSVLNRRRGIVIGEERRIGSPLFSVKAHLPVLESFGFTADLRSHTAGQAFPQCVFDHW--ASIGVVNKDKKATEVALATRKRKGLAPEIPDLDKFHEKL 839          
BLAST of CX301031 vs. ExPASy Swiss-Prot
Match: EF2_ENTHI (Elongation factor 2 OS=Entamoeba histolytica GN=EF-2 PE=2 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 6.333e-52
Identity = 95/170 (55.88%), Postives = 125/170 (73.53%), Query Frame = 2
Query:   20 EGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEFEDKL 529
            +G +  E +RG+   + DV LHADAIHRGG Q+IP ARR  +A  LT  P LLEP+Y+ EIQ PE A+GGIY+V++++RG +  E QRPGTPL+N++AYLPV ESFGF+  LR+ TSGQAFPQCVFDHW +++ D  +  ++   +VA IRKRKGL E +  L +F DKL
Sbjct:  671 DGVVCNEQIRGVRINLEDVKLHADAIHRGGAQMIPCARRCCFACVLTGAPSLLEPMYLAEIQCPESAIGGIYTVMSRRRGKIISEEQRPGTPLFNVRAYLPVCESFGFTADLRSHTSGQAFPQCVFDHWQLLNGDVTDATSKVGSIVAAIRKRKGLPEGVPGLDKFYDKL 840          
BLAST of CX301031 vs. ExPASy Swiss-Prot
Match: EF2_BLAHO (Elongation factor 2 OS=Blastocystis hominis PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 3.044e-46
Identity = 89/170 (52.35%), Postives = 117/170 (68.82%), Query Frame = 2
Query:   23 GALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMS-SDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEFEDKL 529
            G + +E  R +  ++ DV LHAD+IHRG GQ++P ARRV+  + L A+P L+EPV++ EIQ P    GGIY VL ++RGHVFEE+   GTP+ NIK+YLPV ESFGF+  LR AT+GQAFPQCVF HW   +  DPL  GT+  ++V  IR RKGL  ++     + DKL
Sbjct:  698 GPIVDEPCRNVLCKLMDVTLHADSIHRGMGQIMPPARRVVLGTMLKAEPILVEPVFLCEIQVPRAVSGGIYGVLTRRRGHVFEEIDEVGTPMMNIKSYLPVAESFGFTQDLRGATAGQAFPQCVFSHWQAYNGGDPLTEGTKTNEMVKSIRNRKGLAPEVPTPERYLDKL 867          
The following BLAST results are available for this feature:
BLAST of CX301031 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 100
Match NameE-valueIdentityDescription
EF2_PICPA1.903e-5660.23Elongation factor 2 OS=Pichia pastoris GN=EFT1 PE=... [more]
EF2_ASHGO2.485e-5660.82Elongation factor 2 OS=Ashbya gossypii GN=EFT1 PE=... [more]
EF2_CANGA4.238e-5660.23Elongation factor 2 OS=Candida glabrata GN=EFT1 PE... [more]
EF2_SACCA7.230e-5660.82Elongation factor 2 OS=Saccharomyces castellii GN=... [more]
EF2_DEBHA7.993e-5558.48Elongation factor 2 OS=Debaryomyces hansenii GN=EF... [more]
EF2_CANAL3.967e-5459.06Elongation factor 2 OS=Candida albicans GN=EFT2 PE... [more]
EF2_PICGU5.181e-5459.65Elongation factor 2 OS=Pichia guilliermondii GN=EF... [more]
EF2_DICDI1.969e-5359.06Elongation factor 2 OS=Dictyostelium discoideum GN... [more]
EF2_ENTHI6.333e-5255.88Elongation factor 2 OS=Entamoeba histolytica GN=EF... [more]
EF2_BLAHO3.044e-4652.35Elongation factor 2 OS=Blastocystis hominis PE=2 S... [more]

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Properties
Property NameValue
Genbank descriptionC08005A02SK PhyRootSw1 Citrus sinensis cDNA clone C08005A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX301031 ID=CX301031; Name=CX301031; organism=Citrus sinensis; type=EST; length=741bp
GGAATTCGGCACGAGGAAAGAAGGTGCGCTGGCTGAAGAGAACATGAGAG
GTATCTGCTTTGAAGTATGTGATGTTGTTCTTCACGCTGATGCCATTCAC
AGAGGTGGTGGTCAAGTCATTCCTACTGCTAGGAGGGTCATATATGCTTC
CCAGCTCACAGCCAAGCCCAGGCTTCTTGAGCCTGTCTACATGGTCGAAA
TACAGGCTCCCGAGCAGGCCCTTGGTGGTATTTACAGTGTTCTCAATCAG
AAACGTGGTCACGTGTTCGAGGAAATGCAGAGACCTGGTACCCCCCTTTA
CAACATCAAGGCTTACCTTCCCGTCATCGAGTCCTTTGGATTCTCAGGCA
CTTTGAGGGCTGCAACGTCAGGACAGGCCTTCCCACAATGTGTGTTTGAT
CACTGGGACATGATGTCATCCGATCCACTGGAGCCTGGTACACAGGCTGC
ACAGCTTGTTGCTGATATCAGGAAGAGGAAGGGCTTGAAGGAGCAAATGA
CACCACTATCTGAGTTTGAGGACAAGCTGTAAACATTTCGTCTTGACATC
AAGGGTGAGATTGCGCAGCTTGTTGCTGATATCAGGAAGAGGGAGCAAAT
GACACCGCTATCCGAGTAGAGGACGAGCTGTAAACATTTCATCTTGACAT
CAAGGGTGAGATTGCGCAGCAATATTTTTTGCTGATGCTTATTTTTGTTT
CAAGTTTTTCATATCCTCATTGTGTTTAGTAAAGTATATTA
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