CX301031

Overview
NameCX301031
Unique NameCX301031
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length741
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX301031 vs. ExPASy Swiss-Prot
Match: EF2_METTP (Elongation factor 2 OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=fusA PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.773e-23
Identity = 65/165 (39.39%), Postives = 91/165 (55.15%), Query Frame = 2
Query:   23 GALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEF 517
            G +  E ++GI  ++ DV LH DA+HRG  QVIP  R+ + A  L A P LLEP+  V IQ P+  +GG  S +  +RG V   M+  G  +  IKA +PV E FGF+G +R+AT G+A     F  ++ +      P       V  IR RKGLK +M   S++
Sbjct:  571 GPICREPVQGIKAKLVDVKLHEDAVHRGPAQVIPAVRQAVQAGILMANPTLLEPMQYVFIQVPQDQMGGAMSEIQGRRG-VILSMETEG-DMITIKAKMPVAEMFGFAGAIRSATEGRALWSTEFAGFEPI------PANMMLDTVRQIRTRKGLKPEMPTPSDY 727          
BLAST of CX301031 vs. ExPASy Swiss-Prot
Match: EF2_PYRAR (Elongation factor 2 OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=fusA PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.621e-23
Identity = 60/165 (36.36%), Postives = 93/165 (56.36%), Query Frame = 2
Query:   23 GALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEF 517
            G LA+E MRG+   + D V+H D  HRG  Q++P  +  I+A+ L+A+P LLEP+  ++I+     +G + SVLN+ RG + +  Q+    +  ++A LPV+ESF  S  LRAA +G+ F    F  W         P +     V  +RK+KGLKE +   ++F
Sbjct:  580 GPLAQEPMRGVKVVLVDAVVHEDPAHRGPAQIMPATKNAIFAAVLSARPTLLEPLVRLDIKVAPDYIGSVTSVLNKHRGKILDMTQQ--EYMAYLRAELPVLESFTISDELRAAAAGKIFWSMQFARWAPY------PESMLVDFVKQLRKKKGLKEDIPKPTDF 736          
BLAST of CX301031 vs. ExPASy Swiss-Prot
Match: EF2_PYRCJ (Elongation factor 2 OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=fusA PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.730e-23
Identity = 58/165 (35.15%), Postives = 94/165 (56.97%), Query Frame = 2
Query:   23 GALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEF 517
            G LA+E +RG+   + D V+H D  HRG  Q++P  +  I+A+ L+A+P +LEP+  ++I+     +G + SV+N+ RG + +  Q+       ++A LPV+ESF  S  LRAA +G+ F    F  W         P +  A  V  +RK+KGLKE++   ++F
Sbjct:  580 GPLAQEPIRGVKVVLVDAVVHEDPAHRGPAQIMPATKNAIFAAFLSARPTILEPLVRLDIKVAPDYIGAVTSVINKHRGKILDMTQQEYMAF--LRAELPVLESFTISDELRAAAAGKIFWSMQFSRWAPY------PESMLADFVKQLRKKKGLKEEIPKPTDF 736          
BLAST of CX301031 vs. ExPASy Swiss-Prot
Match: EF2_DESMO (Elongation factor 2 OS=Desulfurococcus mobilis GN=fusA PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.730e-23
Identity = 63/167 (37.72%), Postives = 91/167 (54.49%), Query Frame = 2
Query:   17 KEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEF 517
            KEG LA E +RG+   + D V+H D  HRG  Q+ P  R  I+A  LTAKP +LEP+  ++I+ P + +G I +V+ +KRG + E  Q   +    + A +PV ESF  +  LR  T+G+A     F  W  +      P +    LV+ IR RKGLK +   L +F
Sbjct:  573 KEGPLAMEPVRGVKVVLHDAVVHEDPAHRGPAQIFPAVRNAIFAGFLTAKPTILEPILKLDIRTPMEYIGNISTVITKKRGKLIEVQQMETSA--RVIAEIPVSESFDIADMLRNVTAGKAIWGQEFSRWAPV------PESMLMDLVSKIRTRKGLKPEPPKLEDF 731          
BLAST of CX301031 vs. ExPASy Swiss-Prot
Match: EF2_AERPE (Elongation factor 2 OS=Aeropyrum pernix GN=fusA PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.730e-23
Identity = 64/157 (40.76%), Postives = 91/157 (57.96%), Query Frame = 2
Query:   17 KEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGL 487
            KEG LA E +RG+   + D V+H D +HRG GQ+ P  R  I+A  L  +P LLEP+  ++I+AP + L  I +VL +KRG +   ++  G  +  I A +PV ESF  +G LR+AT+G+AF    F  W  +      P      L+A IR+RKGL
Sbjct:  575 KEGPLAAEPVRGVKVVLHDAVIHEDPVHRGPGQLYPAVRNAIWAGILDGRPTLLEPLQKLDIRAPMEYLSNITAVLTRKRGRII-NVETTGV-MARIIAAIPVAESFDLAGELRSATAGRAFWGVEFYGWAPV------PDQMLQDLIAKIRQRKGL 723          
BLAST of CX301031 vs. ExPASy Swiss-Prot
Match: EF2_DESK1 (Elongation factor 2 OS=Desulfurococcus kamchatkensis (strain 1221n / DSM 18924) GN=fusA PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.054e-22
Identity = 62/167 (37.13%), Postives = 90/167 (53.89%), Query Frame = 2
Query:   17 KEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEF 517
            +EG LA E +RG+   + D V+H D  HRG  Q+ P  R  I+A  LTA+P +LEP+  ++I++P + +G I SV+ +KRG + E  Q   T    + A +PV ESF  +  LR  T+G+A     F  W  +      P      L+A IR RKGLK +     +F
Sbjct:  575 REGPLAMEPVRGVKVVLHDAVIHEDPAHRGPAQIFPAVRNAIFAGFLTARPTILEPILKLDIRSPMEYIGNISSVITKKRGKLIEVQQMETTA--RVIAEIPVSESFDIADMLRNVTAGKAIWGQEFSRWAPV------PENMLMDLIAKIRTRKGLKPEPPKPEDF 733          
BLAST of CX301031 vs. ExPASy Swiss-Prot
Match: EF2_SULTO (Elongation factor 2 OS=Sulfolobus tokodaii GN=fusA PE=3 SV=3)

HSP 1 Score: 106.686 bits (265), Expect = 1.376e-22
Identity = 59/167 (35.33%), Postives = 92/167 (55.09%), Query Frame = 2
Query:   17 KEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEF 517
            KEG LA E +RG+   + D ++H D  HRG  Q+ P  R  I+A  LT+KP LLEP+  ++I+ P   +G +  V+ +KRG +    Q     +  I A +PV ESF  +  LRAA++G+AF    F  W  +      P +    ++  IR+RKGL +++  + +F
Sbjct:  577 KEGPLAHEPIRGLKVVLHDAIIHEDPAHRGPAQLYPAVRNAIFAGFLTSKPTLLEPLQKLDIRVPMDFVGNVSGVITRKRGKILNMTQMGS--IARITAEIPVSESFELASELRAASAGRAFWGTEFSRWAPV------PDSLLLDVIMKIRERKGLPKELPKVEDF 735          
BLAST of CX301031 vs. ExPASy Swiss-Prot
Match: EF2_SULSO (Elongation factor 2 OS=Sulfolobus solfataricus GN=fusA PE=1 SV=3)

HSP 1 Score: 106.686 bits (265), Expect = 1.376e-22
Identity = 58/167 (34.73%), Postives = 92/167 (55.09%), Query Frame = 2
Query:   17 KEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEF 517
            KEG LA E +RG+   + D V+H D  HRG  Q+ P  R  I+A  LT++P LLEP+  ++I+ P   +G + +V+ +KRG + +  Q     +  I A +PV ES+  +  LR +T G+AF    F  W  +      P +    +V  IR+RKGL +++  + +F
Sbjct:  576 KEGPLAHEPIRGVKVILHDAVIHEDPAHRGPAQIYPAVRNSIFAGFLTSRPTLLEPIQKLDIRVPADLIGNVTAVITRKRGKILDVSQIAN--MSRITAEIPVSESYDMASELRGSTGGRAFWGTEFSRWAPV------PDSILLDVVTKIRERKGLPKELPKVEDF 734          
BLAST of CX301031 vs. ExPASy Swiss-Prot
Match: EF2_SULIY (Elongation factor 2 OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=fusA PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.376e-22
Identity = 58/167 (34.73%), Postives = 92/167 (55.09%), Query Frame = 2
Query:   17 KEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEF 517
            KEG LA E +RG+   + D V+H D  HRG  Q+ P  R  I+A  LT++P LLEP+  ++I+ P   +G + +V+ +KRG + +  Q     +  I A +PV ES+  +  LR +T G+AF    F  W  +      P +    +V  IR+RKGL +++  + +F
Sbjct:  576 KEGPLAHEPIRGVKVILHDAVIHEDPAHRGPAQIYPAVRNSIFAGFLTSRPTLLEPIQKLDIRVPADLIGNVTAVITRKRGKILDVSQIAN--MSRITAEIPVSESYDMASELRGSTGGRAFWGTEFSRWAPV------PDSILLDVVTKIRERKGLPKELPKVEDF 734          
BLAST of CX301031 vs. ExPASy Swiss-Prot
Match: EF2_SULIN (Elongation factor 2 OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=fusA PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.376e-22
Identity = 58/167 (34.73%), Postives = 92/167 (55.09%), Query Frame = 2
Query:   17 KEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQMTPLSEF 517
            KEG LA E +RG+   + D V+H D  HRG  Q+ P  R  I+A  LT++P LLEP+  ++I+ P   +G + +V+ +KRG + +  Q     +  I A +PV ES+  +  LR +T G+AF    F  W  +      P +    +V  IR+RKGL +++  + +F
Sbjct:  576 KEGPLAHEPIRGVKVILHDAVIHEDPAHRGPAQIYPAVRNSIFAGFLTSRPTLLEPIQKLDIRVPADLIGNVTAVITRKRGKILDVSQIAN--MSRITAEIPVSESYDMASELRGSTGGRAFWGTEFSRWAPV------PDSILLDVVTKIRERKGLPKELPKVEDF 734          
The following BLAST results are available for this feature:
BLAST of CX301031 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 100
Match NameE-valueIdentityDescription
EF2_METTP2.773e-2339.39Elongation factor 2 OS=Methanosaeta thermophila (s... [more]
EF2_PYRAR3.621e-2336.36Elongation factor 2 OS=Pyrobaculum arsenaticum (st... [more]
EF2_PYRCJ4.730e-2335.15Elongation factor 2 OS=Pyrobaculum calidifontis (s... [more]
EF2_DESMO4.730e-2337.72Elongation factor 2 OS=Desulfurococcus mobilis GN=... [more]
EF2_AERPE4.730e-2340.76Elongation factor 2 OS=Aeropyrum pernix GN=fusA PE... [more]
EF2_DESK11.054e-2237.13Elongation factor 2 OS=Desulfurococcus kamchatkens... [more]
EF2_SULTO1.376e-2235.33Elongation factor 2 OS=Sulfolobus tokodaii GN=fusA... [more]
EF2_SULSO1.376e-2234.73Elongation factor 2 OS=Sulfolobus solfataricus GN=... [more]
EF2_SULIY1.376e-2234.73Elongation factor 2 OS=Sulfolobus islandicus (stra... [more]
EF2_SULIN1.376e-2234.73Elongation factor 2 OS=Sulfolobus islandicus (stra... [more]

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Properties
Property NameValue
Genbank descriptionC08005A02SK PhyRootSw1 Citrus sinensis cDNA clone C08005A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX301031 ID=CX301031; Name=CX301031; organism=Citrus sinensis; type=EST; length=741bp
GGAATTCGGCACGAGGAAAGAAGGTGCGCTGGCTGAAGAGAACATGAGAG
GTATCTGCTTTGAAGTATGTGATGTTGTTCTTCACGCTGATGCCATTCAC
AGAGGTGGTGGTCAAGTCATTCCTACTGCTAGGAGGGTCATATATGCTTC
CCAGCTCACAGCCAAGCCCAGGCTTCTTGAGCCTGTCTACATGGTCGAAA
TACAGGCTCCCGAGCAGGCCCTTGGTGGTATTTACAGTGTTCTCAATCAG
AAACGTGGTCACGTGTTCGAGGAAATGCAGAGACCTGGTACCCCCCTTTA
CAACATCAAGGCTTACCTTCCCGTCATCGAGTCCTTTGGATTCTCAGGCA
CTTTGAGGGCTGCAACGTCAGGACAGGCCTTCCCACAATGTGTGTTTGAT
CACTGGGACATGATGTCATCCGATCCACTGGAGCCTGGTACACAGGCTGC
ACAGCTTGTTGCTGATATCAGGAAGAGGAAGGGCTTGAAGGAGCAAATGA
CACCACTATCTGAGTTTGAGGACAAGCTGTAAACATTTCGTCTTGACATC
AAGGGTGAGATTGCGCAGCTTGTTGCTGATATCAGGAAGAGGGAGCAAAT
GACACCGCTATCCGAGTAGAGGACGAGCTGTAAACATTTCATCTTGACAT
CAAGGGTGAGATTGCGCAGCAATATTTTTTGCTGATGCTTATTTTTGTTT
CAAGTTTTTCATATCCTCATTGTGTTTAGTAAAGTATATTA
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