CX300835
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300835 vs. ExPASy Swiss-Prot
Match: RUB3_ARATH (NEDD8-like protein RUB3 OS=Arabidopsis thaliana GN=RUB3 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 6.381e-18 Identity = 41/76 (53.95%), Postives = 58/76 (76.32%), Query Frame = 3 Query: 210 MQIFVKTLTGKTITLEVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 437 M+I VKTLT K I +E+E +D+I+ +K++I++KEGIPP QR+++ GKQL D T YN+++ S LHLVL LRGG Sbjct: 1 MEIKVKTLTEKQIDIEIELTDTIERIKERIEEKEGIPPVHQRIVYTGKQLADDLTAKHYNLERGSVLHLVLALRGG 76 HSP 2 Score: 78.5666 bits (192), Expect = 1.471e-14 Identity = 34/66 (51.52%), Postives = 50/66 (75.76%), Query Frame = 3 Query: 12 KTITLEVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 209 K I +E+E +D+I+ +K++I++KEGIPP QR+++ GKQL D T YN+++ S LHLVL LRGG Sbjct: 11 KQIDIEIELTDTIERIKERIEEKEGIPPVHQRIVYTGKQLADDLTAKHYNLERGSVLHLVLALRGG 76
BLAST of CX300835 vs. ExPASy Swiss-Prot
Match: UBD_HUMAN (Ubiquitin D OS=Homo sapiens GN=UBD PE=1 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 2.681e-16 Identity = 50/146 (34.25%), Postives = 78/146 (53.42%), Query Frame = 3 Query: 18 ITLEVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL----RGGMQIFVKTL--TGKTITLEVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 437 +T + P DS+ +K+ ++ K +P Q L+ K L+ R+LS Y I KE T+HL L++ + +F+ K L+V S S+ VK I+ K GI P+ Q + GK+LEDG+ ++DY I+K + L L GG Sbjct: 20 MTFDANPYDSVKKIKEHVRSKTKVPVQDQVLLLGSKILKPRRSLSSYGIDKEKTIHLTLKVVKPSDEELPLFLVESGDEAKRHLLQVRRSSSVAQVKAMIETKTGIIPETQIVTCNGKRLEDGKMMADYGIRKGNLLFLACYCIGG 165
BLAST of CX300835 vs. ExPASy Swiss-Prot
Match: RUB1_YEAST (NEDD8-like protein RUB1 OS=Saccharomyces cerevisiae GN=RUB1 PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.681e-16 Identity = 40/76 (52.63%), Postives = 59/76 (77.63%), Query Frame = 3 Query: 210 MQIFVKTLTGKTITLEVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 437 M + VKTLTGK I++E++ SD + ++K+ +++KEGIPP QQRLIF GKQ++D T++D ++ + LHLVL LRGG Sbjct: 1 MIVKVKTLTGKEISVELKESDLVYHIKELLEEKEGIPPSQQRLIFQGKQIDDKLTVTDAHLVEGMQLHLVLTLRGG 76 HSP 2 Score: 74.7146 bits (182), Expect = 2.124e-13 Identity = 34/67 (50.75%), Postives = 52/67 (77.61%), Query Frame = 3 Query: 9 GKTITLEVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 209 GK I++E++ SD + ++K+ +++KEGIPP QQRLIF GKQ++D T++D ++ + LHLVL LRGG Sbjct: 10 GKEISVELKESDLVYHIKELLEEKEGIPPSQQRLIFQGKQIDDKLTVTDAHLVEGMQLHLVLTLRGG 76
BLAST of CX300835 vs. ExPASy Swiss-Prot
Match: UCRP_MOUSE (Ubiquitin cross-reactive protein OS=Mus musculus GN=Isg15 PE=1 SV=4) HSP 1 Score: 77.7962 bits (190), Expect = 2.509e-14 Identity = 47/144 (32.64%), Postives = 77/144 (53.47%), Query Frame = 3 Query: 9 GKTITLEVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR-LRGGMQIFVKTLTGKTITLEVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 437 G + V S ++ +K++I K G+P QQRL L+DG TLS + ST+ LV++ + I V+ G + EV + ++D +K+K+ +E + DQ L F G+ +ED L +Y ++ + T+ LRLRGG Sbjct: 12 GNDFLVSVTNSMTVSELKKQIAQKIGVPAFQQRLAHQTAVLQDGLTLSSLGLGPSSTVMLVVQNCSEPLSILVRNERGHSNIYEVFLTQTVDTLKKKVSQREQVHEDQFWLSFEGRPMEDKELLGEYGLKPQCTVIKHLRLRGG 155
BLAST of CX300835 vs. ExPASy Swiss-Prot
Match: UBD_RAT (Ubiquitin D OS=Rattus norvegicus GN=Ubd PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 7.301e-14 Identity = 45/146 (30.82%), Postives = 74/146 (50.68%), Query Frame = 3 Query: 18 ITLEVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL------RGGMQIFVKTLTGKTITLEVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 437 +T + SD + + + I+ + + Q L+ K L+ R LS Y I KE+T+HL L++ + + G+ L V S S+ VK+ I++ +PP +Q + GK+LEDG+ ++DYNI+ S L L GG Sbjct: 16 MTFDTTMSDKVKKINEHIRSQTKVSVQDQILLLDSKILKPHRALSSYGIDKENTIHLTLKVVKPSDEELPLSLVESGDEGQRHLLRVRRSSSVAQVKEMIENVTAVPPKKQIVNCNGKRLEDGKIMADYNIKSGSLLFLTAHCIGG 161
BLAST of CX300835 vs. ExPASy Swiss-Prot
Match: UBD_MOUSE (Ubiquitin D OS=Mus musculus GN=Ubd PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 6.180e-13 Identity = 45/148 (30.41%), Postives = 75/148 (50.68%), Query Frame = 3 Query: 12 KTITLEVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL----RGGMQIFV--KTLTGKTITLEVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 437 + +T E +D + + + I+ + + Q L+ K L+ R LS Y I KE+T+HL L++ + +F+ G+ L V S S+ VK+ I+ + P +Q + GK+LEDG+ ++DYNI+ S L L GG Sbjct: 15 RLMTFETTENDKVKKINEHIRSQTKVSVQDQILLLDSKILKPHRKLSSYGIDKETTIHLTLKVVKPSDEELPLFLVESKNEGQRHLLRVRRSSSVAQVKEMIESVTSVIPKKQVVNCNGKKLEDGKIMADYNIKSGSLLFLTTHCTGG 162
BLAST of CX300835 vs. ExPASy Swiss-Prot
Match: UCRP_HUMAN (Interferon-induced 17 kDa protein OS=Homo sapiens GN=ISG15 PE=1 SV=5) HSP 1 Score: 70.0922 bits (170), Expect = 5.232e-12 Identity = 47/146 (32.19%), Postives = 77/146 (52.74%), Query Frame = 3 Query: 9 GKTITLEVEPSDSIDNVKQKIQDKEGIPPDQQRLIF--AGKQLEDGRTLSDYNIQKESTLHLVL-RLRGGMQIFVKTLTGKTITLEVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 437 G + + S S+ +K +I K G+ QQRL +G L+D L+ + ST+ LV+ + + I V+ G++ T EV + ++ ++KQ++ EG+ D L F GK LED L +Y ++ ST+ + LRLRGG Sbjct: 12 GNEFQVSLSSSMSVSELKAQITQKIGVHAFQQRLAVHPSGVALQDRVPLASQGLGPGSTVLLVVDKCDEPLSILVRNNKGRSSTYEVRLTQTVAHLKQQVSGLEGVQDDLFWLTFEGKPLEDQLPLGEYGLKPLSTVFMNLRLRGG 157
BLAST of CX300835 vs. ExPASy Swiss-Prot
Match: ANUB1_HUMAN (AN1-type zinc finger and ubiquitin domain-containing protein 1 OS=Homo sapiens GN=ANUBL1 PE=2 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 1.166e-11 Identity = 35/76 (46.05%), Postives = 51/76 (67.11%), Query Frame = 3 Query: 210 MQIFVKTLTGKTITLEVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 437 M++F++TLTG L V P +++ +VK KI+ EGIP +Q LI+ +LE+ L+DYNI + TL LVL +RGG Sbjct: 28 MELFIETLTGTCFELRVSPFETVISVKAKIRRLEGIPICRQHLIWNNMELENDYCLNDYNISEGCTLKLVLAMRGG 103
BLAST of CX300835 vs. ExPASy Swiss-Prot
Match: UCRP_BOVIN (Ubiquitin cross-reactive protein OS=Bos taurus GN=ISG15 PE=2 SV=3) HSP 1 Score: 67.3958 bits (163), Expect = 3.391e-11 Identity = 44/145 (30.34%), Postives = 77/145 (53.10%), Query Frame = 3 Query: 9 GKTITLEVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQ--LEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 437 G+ I + + S ++ +KQ I K +P QQRL + L++G L ++ ST+ LV++ + I V+ G++ EV+ ++ +KQ++ KE + DQ L F G+ ++D L +Y + K T+ + LRLRGG Sbjct: 12 GQEILVPLRDSMTVSELKQFIAQKINVPAFQQRLAHLDSREVLQEGVPLVLQGLRAGSTVLLVVQ--NCISILVRNDKGRSSPYEVQLKQTVAELKQQVCQKERVQADQFWLSFEGRPMDDEHPLEEYGLMKGCTVFMNLRLRGG 154
BLAST of CX300835 vs. ExPASy Swiss-Prot
Match: OASL_HUMAN (59 kDa 2'-5'-oligoadenylate synthetase-like protein OS=Homo sapiens GN=OASL PE=1 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 3.391e-11 Identity = 47/136 (34.56%), Postives = 73/136 (53.68%), Query Frame = 3 Query: 24 LEVEPSDSIDNVKQKIQDKEGIPPDQQRLIF----AGKQLEDGR-TLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 416 L V P + I VK+KI+ G QRL F + +QL R +L+ Y I + ++L+ + +Q+FVK G + + P+ I +KQ+I+D++G+P QQ+L F G+ L+D L Y IQ TL L Sbjct: 368 LIVNPYEPIRKVKEKIRRTRGYS-GLQRLSFQVPGSERQLLSSRCSLAKYGIFSHTHIYLLETIPSEIQVFVKNPDGGSYAYAINPNSFILGLKQQIEDQQGLPKKQQQLEFQGQVLQDWLGLGIYGIQDSDTLIL 502 The following BLAST results are available for this feature:
BLAST of CX300835 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 101
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300835 ID=CX300835; Name=CX300835; organism=Citrus sinensis; type=EST; length=466bpback to top |