CX300757
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300757 vs. ExPASy Swiss-Prot
Match: RS3A_GECJA (40S ribosomal protein S3a OS=Gecko japonicus GN=RPS3A PE=2 SV=3) HSP 1 Score: 214.157 bits (544), Expect = 5.308e-55 Identity = 106/171 (61.99%), Postives = 132/171 (77.19%), Query Frame = 1 Query: 1 LVAEDVQGTNVLTNFHGMDITRDKLCSLIRKWQTLIEASVDVRTTDGYVLRLFAIAFTKKQQNQAARSTCYAQSGQVRNIRKKMFEIMTEEASKCDLKELVQKFIAHPDSIGAEIEKKCQSIFPLQNVLIRKVKMLKKPKFDVTKLMELHGD------TTAEDSGVAIDKA 495 L+ EDVQG N LTNFHGMD+TRDK+CS+++KWQT+IEA VDV+TTDGY+LRLF + FTKK+ NQ R T YAQ QVR IRKKM EIMT E DLKE+V K I PDSIG ++EK CQSI+PL +V +RKVKMLKKPKF++ KLMELHG+ T +++G +++A Sbjct: 86 LITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQ-IRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLI--PDSIGKDMEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERA 253
BLAST of CX300757 vs. ExPASy Swiss-Prot
Match: RS3A_COPC7 (40S ribosomal protein S1 OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003) GN=RPS1 PE=3 SV=1) HSP 1 Score: 214.157 bits (544), Expect = 5.308e-55 Identity = 107/164 (65.24%), Postives = 134/164 (81.71%), Query Frame = 1 Query: 1 LVAEDVQGTNVLTNFHGMDITRDKLCSLIRKWQTLIEASVDVRTTDGYVLRLFAIAFTKKQQNQAARSTCYAQSGQVRNIRKKMFEIMTEEASKCDLKELVQKFIAHPDSIGAEIEKKCQSIFPLQNVLIRKVKMLKKPKFDVTKLMELHGDTTAEDSGVAIDK 492 L +++QG N LTNFHGMD T DKL SL+RKWQTL+EA VDV+TTDGY+LRLFAI FTK++ Q ++T YAQ+ QVR +RKKMFEI+T EA+ CDLKELVQKF+ P++IG EIEK +SI+PLQNV IRK K+LK PKFDV+KL+ELHGD+T ++SG + K Sbjct: 86 LRVDEIQGRNCLTNFHGMDFTSDKLRSLVRKWQTLVEAHVDVKTTDGYLLRLFAIGFTKRRPTQVKKTT-YAQTAQVRELRKKMFEIITREATSCDLKELVQKFV--PEAIGREIEKASRSIYPLQNVYIRKAKILKAPKFDVSKLLELHGDST-DESGTRVTK 245
BLAST of CX300757 vs. ExPASy Swiss-Prot
Match: RS3A_MOUSE (40S ribosomal protein S3a OS=Mus musculus GN=Rps3a PE=1 SV=3) HSP 1 Score: 213.386 bits (542), Expect = 9.054e-55 Identity = 106/171 (61.99%), Postives = 131/171 (76.61%), Query Frame = 1 Query: 1 LVAEDVQGTNVLTNFHGMDITRDKLCSLIRKWQTLIEASVDVRTTDGYVLRLFAIAFTKKQQNQAARSTCYAQSGQVRNIRKKMFEIMTEEASKCDLKELVQKFIAHPDSIGAEIEKKCQSIFPLQNVLIRKVKMLKKPKFDVTKLMELHGD------TTAEDSGVAIDKA 495 L+ EDVQG N LTNFHGMD+TRDK+CS+++KWQT+IEA VDV+TTDGY+LRLF + FTKK+ NQ R T YAQ QVR IRKKM EIMT E DLKE+V K I PDSIG +IEK CQSI+PL +V +RKVKMLKKPKF++ KLMELHG+ +++G +++A Sbjct: 86 LITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQ-IRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLI--PDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGGSSGKAAGDETGAKVERA 253
BLAST of CX300757 vs. ExPASy Swiss-Prot
Match: RS3A1_VITVI (40S ribosomal protein S3a-1 OS=Vitis vinifera GN=GSVIVT00020038001 PE=3 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 9.054e-55 Identity = 114/166 (68.67%), Postives = 131/166 (78.92%), Query Frame = 1 Query: 1 LVAEDVQGTNVLTNFHGMDITRDKLCSLIRKWQTLIEASVDVRTTDGYVLRLFAIAFTKKQQNQAARSTCYAQSGQVRNIRKKMFEIMTEEASKCDLKELVQKFIAHPDSIGAEIEKKCQSIFPLQNVLIRKVKMLKKPKFDVTKLMELHGDTTAEDSGVAIDKAA 498 L AEDVQG NVLTNF GMD T DKL SL+RKWQTLIEA VDV+TTD Y LRLF IAFTKK+ NQ + TCYAQS Q+R IR+KM EIMT A+ CDLKELV+KFI P+SIG EIEK SI+PLQNV IRKVK+LK PKFD+ KLME+HGD +ED G +++ A Sbjct: 86 LRAEDVQGRNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRLFCIAFTKKRVNQ-NKKTCYAQSSQIRQIRRKMREIMTNMATSCDLKELVKKFI--PESIGREIEKATSSIYPLQNVYIRKVKILKAPKFDLGKLMEVHGD-YSEDVGTKLERPA 247
BLAST of CX300757 vs. ExPASy Swiss-Prot
Match: RS3A_TAEGU (40S ribosomal protein S3a OS=Taeniopygia guttata GN=RPS3A PE=2 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 1.182e-54 Identity = 106/171 (61.99%), Postives = 132/171 (77.19%), Query Frame = 1 Query: 1 LVAEDVQGTNVLTNFHGMDITRDKLCSLIRKWQTLIEASVDVRTTDGYVLRLFAIAFTKKQQNQAARSTCYAQSGQVRNIRKKMFEIMTEEASKCDLKELVQKFIAHPDSIGAEIEKKCQSIFPLQNVLIRKVKMLKKPKFDVTKLMELHGD------TTAEDSGVAIDKA 495 L+ EDVQG N LTNFHGMD+TRDK+CS+++KWQT+IEA VDV+TTDGY+LRLF + FTKK+ NQ R T YAQ QVR IRKKM EIMT E DLKE+V K I PDSIG +IEK CQSI+PL +V +RKVKMLKKPKF++ KLMELHG+ + +++G +++A Sbjct: 86 LITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQ-IRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLI--PDSIGKDIEKACQSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGGAGKPSGDEAGTKVERA 253
BLAST of CX300757 vs. ExPASy Swiss-Prot
Match: RS3A_HELAN (40S ribosomal protein S3a OS=Helianthus annuus GN=RPS3A PE=2 SV=2) HSP 1 Score: 213.001 bits (541), Expect = 1.182e-54 Identity = 111/166 (66.87%), Postives = 131/166 (78.92%), Query Frame = 1 Query: 1 LVAEDVQGTNVLTNFHGMDITRDKLCSLIRKWQTLIEASVDVRTTDGYVLRLFAIAFTKKQQNQAARSTCYAQSGQVRNIRKKMFEIMTEEASKCDLKELVQKFIAHPDSIGAEIEKKCQSIFPLQNVLIRKVKMLKKPKFDVTKLMELHGDTTAEDSGVAIDKAA 498 L AEDVQG NVLTNF GMD+T DKL SL++KWQ+LIEA VDV+TTD + LR+F I FTKK+ NQ R TCYAQS Q++ IR+KM EIM +A CDLKELVQKFI P+SIG EIEK SI+PLQNV IRKVK+LK PKFD+ KLME+HGD +ED GV +D+ A Sbjct: 86 LRAEDVQGKNVLTNFWGMDVTTDKLRSLVKKWQSLIEAHVDVKTTDNFTLRMFCIGFTKKRANQVKR-TCYAQSSQIKQIRRKMREIMVTQAQTCDLKELVQKFI--PESIGREIEKATSSIYPLQNVFIRKVKILKAPKFDIGKLMEVHGD-YSEDVGVKLDRPA 247
BLAST of CX300757 vs. ExPASy Swiss-Prot
Match: RS3A_XENTR (40S ribosomal protein S3a OS=Xenopus tropicalis GN=rps3a PE=2 SV=3) HSP 1 Score: 212.616 bits (540), Expect = 1.544e-54 Identity = 106/171 (61.99%), Postives = 131/171 (76.61%), Query Frame = 1 Query: 1 LVAEDVQGTNVLTNFHGMDITRDKLCSLIRKWQTLIEASVDVRTTDGYVLRLFAIAFTKKQQNQAARSTCYAQSGQVRNIRKKMFEIMTEEASKCDLKELVQKFIAHPDSIGAEIEKKCQSIFPLQNVLIRKVKMLKKPKFDVTKLMELHGD------TTAEDSGVAIDKA 495 L+ EDVQG N LTNFHGMD+TRDK+CS+++KWQT+IEA VDV+TTDGY+LRLF + FTKK+ NQ R T YAQ QVR IRKKM EIMT E DLKE+V K I PDSIG +IEK CQSI+PL +V +RKVKMLKKPKF++ KLMELHG+ +++G +++A Sbjct: 86 LITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQ-IRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLI--PDSIGKDIEKACQSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGGAGKPAGDETGAKVERA 253
BLAST of CX300757 vs. ExPASy Swiss-Prot
Match: RS3A_CICAR (40S ribosomal protein S3a OS=Cicer arietinum PE=2 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 1.544e-54 Identity = 111/172 (64.53%), Postives = 131/172 (76.16%), Query Frame = 1 Query: 1 LVAEDVQGTNVLTNFHGMDITRDKLCSLIRKWQTLIEASVDVRTTDGYVLRLFAIAFTKKQQNQAARSTCYAQSGQVRNIRKKMFEIMTEEASKCDLKELVQKFIAHPDSIGAEIEKKCQSIFPLQNVLIRKVKMLKKPKFDVTKLMELHGDTTAEDSGVAIDKAAAANTVK 516 L AEDVQG NVLTNF+GMD T DKL SL+RKWQTLIEA VDV+TTD Y LR+F I FTK++ NQ R TCYAQS Q+R IR+KM EIM +A+ CDLKELV+KFI P+ IG EIEK SI+PLQNV IRKVK+LK PKFD+ KLME+HGD +ED G ++ A V+ Sbjct: 86 LRAEDVQGKNVLTNFYGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCIGFTKRRSNQVKR-TCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFI--PEMIGKEIEKATSSIYPLQNVFIRKVKILKSPKFDLGKLMEVHGD-YSEDVGTKVESPADETVVE 253
BLAST of CX300757 vs. ExPASy Swiss-Prot
Match: RS3A_APLCA (40S ribosomal protein S3a OS=Aplysia californica GN=RPS3A PE=3 SV=2) HSP 1 Score: 211.846 bits (538), Expect = 2.634e-54 Identity = 107/161 (66.46%), Postives = 130/161 (80.75%), Query Frame = 1 Query: 1 LVAEDVQGTNVLTNFHGMDITRDKLCSLIRKWQTLIEASVDVRTTDGYVLRLFAIAFTKKQQNQAARSTCYAQSGQVRNIRKKMFEIMTEEASKCDLKELVQKFIAHPDSIGAEIEKKCQSIFPLQNVLIRKVKMLKKPKFDVTKLMELHGD-TTAEDSGV 480 L+AE+VQG NVLTNF GM +TRDKLCS+++KWQTLIEA+VDV+TTDGY+LR+FAI FTKK+ NQ + TCYAQ QV+ IRKKM EI++ E S D+KE+V K I PDSIG +IEK CQ I+PL +VLI KVK+LKKPKFDV KLMELHG+ +T GV Sbjct: 86 LIAEEVQGRNVLTNFSGMSLTRDKLCSMVKKWQTLIEANVDVKTTDGYLLRVFAIGFTKKRNNQ-VKKTCYAQHAQVKAIRKKMVEIVSREVSSNDMKEVVNKLI--PDSIGKDIEKSCQGIYPLHDVLIHKVKVLKKPKFDVGKLMELHGEGSTTTSKGV 243
BLAST of CX300757 vs. ExPASy Swiss-Prot
Match: RS3A_DANRE (40S ribosomal protein S3a OS=Danio rerio GN=rps3a PE=2 SV=3) HSP 1 Score: 211.46 bits (537), Expect = 3.440e-54 Identity = 109/174 (62.64%), Postives = 133/174 (76.44%), Query Frame = 1 Query: 1 LVAEDVQGTNVLTNFHGMDITRDKLCSLIRKWQTLIEASVDVRTTDGYVLRLFAIAFTKKQQNQAARSTCYAQSGQVRNIRKKMFEIMTEEASKCDLKELVQKFIAHPDSIGAEIEKKCQSIFPLQNVLIRKVKMLKKPKFDVTKLMELHGD---TTAE------DSGVAIDKA 495 LV EDVQG N LTNFHGMD+TRDK+CS+++KWQT+IEA VDV+TTDGY+LRLF + FTKK+ NQ R T YAQ QVR IRKKM EIMT E DLKE+V K I PDS+G +IEK CQSI+PL +V +RKVKMLKKPKF++ KLMELHG+ T+A D+G +++A Sbjct: 86 LVTEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRTNQ-IRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLI--PDSVGKDIEKACQSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGSTSAAAKPAEGDTGAKVERA 256 The following BLAST results are available for this feature:
BLAST of CX300757 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 181
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300757 ID=CX300757; Name=CX300757; organism=Citrus sinensis; type=EST; length=681bpback to top |