CX300755
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300755 vs. ExPASy Swiss-Prot
Match: SODM_DEIRA (Superoxide dismutase [Mn] OS=Deinococcus radiodurans GN=sodA PE=1 SV=3) HSP 1 Score: 70.4774 bits (171), Expect = 5.809e-12 Identity = 36/73 (49.32%), Postives = 49/73 (67.12%), Query Frame = 2 Query: 8 KDKSLLVVKTPNAVNPLVWDY------SSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLETAK 208 KD L VV T N NPL+ + + +L +DVWEHAYYL++QNRRPDY++ F + +V+W+ VSKR AK Sbjct: 140 KDGKLDVVSTANQDNPLMGEAIAGVSGTPILGVDVWEHAYYLNYQNRRPDYLAAFWN-VVNWDEVSKRYAAAK 211
BLAST of CX300755 vs. ExPASy Swiss-Prot
Match: SODF_SALTY (Superoxide dismutase [Fe] OS=Salmonella typhimurium GN=sodB PE=3 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 5.809e-12 Identity = 33/62 (53.23%), Postives = 43/62 (69.35%), Query Frame = 2 Query: 11 DKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRL 196 D L +V T NA PL D + LLT+DVWEHAYY+D++N RP+Y+ F LV+WE V+K L Sbjct: 131 DGKLAIVSTSNAGTPLTTDATPLLTVDVWEHAYYIDYRNARPNYLEHFW-ALVNWEFVAKNL 191
BLAST of CX300755 vs. ExPASy Swiss-Prot
Match: SODF_SALTI (Superoxide dismutase [Fe] OS=Salmonella typhi GN=sodB PE=3 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 5.809e-12 Identity = 33/62 (53.23%), Postives = 43/62 (69.35%), Query Frame = 2 Query: 11 DKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRL 196 D L +V T NA PL D + LLT+DVWEHAYY+D++N RP+Y+ F LV+WE V+K L Sbjct: 131 DGKLAIVSTSNAGTPLTTDATPLLTVDVWEHAYYIDYRNARPNYLEHFW-ALVNWEFVAKNL 191
BLAST of CX300755 vs. ExPASy Swiss-Prot
Match: SODF_RICCN (Superoxide dismutase [Mn/Fe] OS=Rickettsia conorii GN=sodB PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 5.809e-12 Identity = 27/62 (43.55%), Postives = 41/62 (66.13%), Query Frame = 2 Query: 11 DKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRL 196 D L ++KT NA P+ LL DVWEHAYY+D++N+RPDY+ +F+ +++W+ V L Sbjct: 146 DNRLQIIKTANAGTPIAHGMKPLLACDVWEHAYYIDYRNKRPDYVDIFIKHMINWKFVEDNL 207
BLAST of CX300755 vs. ExPASy Swiss-Prot
Match: SODM_STAS1 (Superoxide dismutase [Mn/Fe] OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=sodA PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 7.587e-12 Identity = 33/64 (51.56%), Postives = 44/64 (68.75%), Query Frame = 2 Query: 17 SLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLETAK 208 +L +V TPN NPL + +L +DVWEHAYYL +QN+RPDYIS F + +V+WE V + AK Sbjct: 137 NLEIVTTPNQDNPLTEGKTPILGLDVWEHAYYLKYQNKRPDYISAFWN-VVNWEKVDELYNAAK 199
BLAST of CX300755 vs. ExPASy Swiss-Prot
Match: SODM_STACA (Superoxide dismutase [Mn/Fe] OS=Staphylococcus carnosus GN=sodA PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 7.587e-12 Identity = 32/67 (47.76%), Postives = 44/67 (65.67%), Query Frame = 2 Query: 5 EKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLETA 205 +KD L +V TPN NP+ + +L +DVWEHAYYL +QN+RPDYI F + +V+W V + E A Sbjct: 134 DKDGKLEIVSTPNQDNPITEGKTPILGLDVWEHAYYLKYQNKRPDYIDAFWN-VVNWNKVDELYEAA 199
BLAST of CX300755 vs. ExPASy Swiss-Prot
Match: SODF_RICBR (Superoxide dismutase [Mn/Fe] OS=Rickettsia bellii (strain RML369-C) GN=sodB PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 7.587e-12 Identity = 28/59 (47.46%), Postives = 40/59 (67.80%), Query Frame = 2 Query: 20 LLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRL 196 L +VKT NA P+ LL DVWEHAYY+D++N+RPDY+ +F+ +++WE V L Sbjct: 149 LQIVKTANAGTPIANGMQPLLACDVWEHAYYIDYRNKRPDYVDIFIKHMINWEFVENNL 207
BLAST of CX300755 vs. ExPASy Swiss-Prot
Match: SODM_STAEP (Superoxide dismutase [Mn/Fe] OS=Staphylococcus epidermidis GN=sodA PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 9.909e-12 Identity = 33/63 (52.38%), Postives = 43/63 (68.25%), Query Frame = 2 Query: 20 LLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLETAK 208 L +V TPN NPL + +L +DVWEHAYYL +QN+RPDYIS F + +V+WE V + AK Sbjct: 138 LEIVTTPNQDNPLTEGKTPILGLDVWEHAYYLKYQNKRPDYISAFWN-VVNWEKVDELYNAAK 199
BLAST of CX300755 vs. ExPASy Swiss-Prot
Match: SODM_BACCA (Superoxide dismutase [Mn] OS=Bacillus caldotenax GN=sodA PE=3 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 9.909e-12 Identity = 31/64 (48.44%), Postives = 46/64 (71.88%), Query Frame = 2 Query: 20 LLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLETAKA 211 L + TPN +P++ + +L +DVWEHAYYL +QNRRP+YI+ F + +V+W+ V+KR AKA Sbjct: 141 LEITSTPNQDSPIMEGKTPILGLDVWEHAYYLKYQNRRPEYIAAFWN-IVNWDEVAKRYSEAKA 203
BLAST of CX300755 vs. ExPASy Swiss-Prot
Match: SODF_SHIFL (Superoxide dismutase [Fe] OS=Shigella flexneri GN=sodB PE=3 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 9.909e-12 Identity = 33/62 (53.23%), Postives = 42/62 (67.74%), Query Frame = 2 Query: 11 DKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRL 196 D L +V T NA PL D + LLT+DVWEHAYY+D++N RP Y+ F LV+WE V+K L Sbjct: 131 DGKLAIVSTSNAGTPLTTDATPLLTVDVWEHAYYIDYRNARPGYLEHFW-ALVNWEFVAKNL 191 The following BLAST results are available for this feature:
BLAST of CX300755 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300755 ID=CX300755; Name=CX300755; organism=Citrus sinensis; type=EST; length=540bpback to top |