CX300751
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300751 vs. ExPASy Swiss-Prot
Match: RL28B_SCHPO (60S ribosomal protein L28-B OS=Schizosaccharomyces pombe GN=rpl28b PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 4.718e-24 Identity = 55/103 (53.40%), Postives = 73/103 (70.87%), Query Frame = 1 Query: 25 KYHPGYFGKVGMRYFHKLRNKFHCPIVNIDKLWSMVPQDVKAKASKDN---VPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAEKKIKEAGGAVVLTA 324 KYHPGYFGKVGMR FH ++N P VN+D+LW++VP + + K N P+I+V Q GY KVLGKG LP+ PV+++ + VS+ AE+KIK+AGG V L A Sbjct: 47 KYHPGYFGKVGMRRFHLMKNPLWRPTVNLDRLWTLVPNETREKYLGKNTEVAPVINVLQSGYGKVLGKGRLPDT-PVIIQTRYVSRRAEEKIKQAGGVVELIA 148
BLAST of CX300751 vs. ExPASy Swiss-Prot
Match: RL28A_SCHPO (60S ribosomal protein L28-A OS=Schizosaccharomyces pombe GN=rpl28a PE=2 SV=3) HSP 1 Score: 110.538 bits (275), Expect = 4.718e-24 Identity = 56/103 (54.37%), Postives = 73/103 (70.87%), Query Frame = 1 Query: 25 KYHPGYFGKVGMRYFHKLRNKFHCPIVNIDKLWSMVPQDVKAKASKDN---VPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAEKKIKEAGGAVVLTA 324 KYHPGYFGKVGMR FH ++N P VN+D+LW+++P + + K N P+I+V Q GY KVLGKG LPE PV+V+ + VS+ AE+KIK+AGG V L A Sbjct: 47 KYHPGYFGKVGMRRFHLMKNPLWRPTVNLDRLWTLLPNEARDKYLGKNTEVAPVINVLQSGYGKVLGKGRLPET-PVIVQTRYVSRRAEEKIKQAGGVVELIA 148
BLAST of CX300751 vs. ExPASy Swiss-Prot
Match: RL27A_DROME (60S ribosomal protein L27a OS=Drosophila melanogaster GN=RpL27A PE=2 SV=2) HSP 1 Score: 109.383 bits (272), Expect = 1.051e-23 Identity = 56/103 (54.37%), Postives = 73/103 (70.87%), Query Frame = 1 Query: 25 KYHPGYFGKVGMRYFHKLRNKFHCPIVNIDKLWSMVPQDVKAKASKD---NVPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAEKKIKEAGGAVVLTA 324 KYHPGYFGKVGMR FH R P +N+DKLWS+V + A+ K+ P+ID+ +FGY+K+LG+G LP +PV+VKAK SK AE KIK+AGG +L+A Sbjct: 48 KYHPGYFGKVGMRNFHLRRQHKFRPEINLDKLWSLVGAEKFAELEKEKSTKAPVIDLVKFGYYKLLGRGHLPA-RPVIVKAKYFSKKAEDKIKKAGGVCLLSA 149
BLAST of CX300751 vs. ExPASy Swiss-Prot
Match: R27A1_ARATH (Putative 60S ribosomal protein L27a-1 OS=Arabidopsis thaliana GN=RPL27AA PE=5 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 2.191e-21 Identity = 59/98 (60.20%), Postives = 62/98 (63.27%), Query Frame = 1 Query: 34 PGYFGK--VGMRYFHKLRNKFHCPIVNIDKLWSMVPQDVKAKASKDNVPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAEKKIKEAGGAVVLT 321 PG G VGMRYFHKLRNKF+C IVN+DKLWSMV LGKG LPEN+PVVVKAKLVS T EKKIKEAG AVVLT Sbjct: 29 PGSRGNAGVGMRYFHKLRNKFYCQIVNLDKLWSMV--------------------------LGKGFLPENKPVVVKAKLVSNTDEKKIKEAGSAVVLT 100
BLAST of CX300751 vs. ExPASy Swiss-Prot
Match: RL27A_TRYBB (60S ribosomal protein L27a OS=Trypanosoma brucei brucei GN=RPL27A PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 1.855e-20 Identity = 52/101 (51.49%), Postives = 68/101 (67.33%), Query Frame = 1 Query: 25 KYHPGYFGKVGMRYFHKLRNKFHCPIVNIDKLWSMVPQDVKAKASKDNV-PMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAEKKIKEAGGAVVLTA 324 KYHPGYFGK GM ++HK +N P +N+D L ++ +D KA K V P+ID+ GY K+LG G L P +VKA+ VSK A+KKI++AGGAVVL A Sbjct: 47 KYHPGYFGKCGMNHYHKKKNTTWKPTINLDNLTKLMAKDEAMKAKKGEVLPVIDLLANGYSKLLGNGHL--QAPCIVKARWVSKLADKKIRKAGGAVVLQA 145
BLAST of CX300751 vs. ExPASy Swiss-Prot
Match: RL27A_TENMO (60S ribosomal protein L27a OS=Tenebrio molitor GN=RpL27A PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 6.598e-18 Identity = 45/103 (43.69%), Postives = 63/103 (61.17%), Query Frame = 1 Query: 25 KYHPGYFGKVGMRYFHKLRNKFHCPIVNIDKLWSMVPQDVKAKAS---KDNVPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAEKKIKEAGGAVVLTA 324 KYHPGYFGK+GMR +H RN P +N+DKLW++V + ++K + P+ID+ + GY+K+LGKG N ++K E KIK GGA VL+A Sbjct: 47 KYHPGYFGKLGMRNYHLRRNSKWAPAINLDKLWTLVSEQTRSKYQNHPEGKAPVIDIVKAGYYKLLGKGACLTNLS-LLKPSFSLNRLEDKIKAVGGACVLSA 148
BLAST of CX300751 vs. ExPASy Swiss-Prot
Match: RL27A_ENCCU (60S ribosomal protein L27a OS=Encephalitozoon cuniculi GN=RPL27A PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 2.869e-13 Identity = 36/101 (35.64%), Postives = 64/101 (63.37%), Query Frame = 1 Query: 25 KYHPGYFGKVGMRYFHKLRNKFHCPIVNIDKLWSMVPQDVKAK--ASKDNVPMIDVTQFGYFKVLGKGVLPENQPVVVKAKLVSKTAEKKIKEAGGAVVLT 321 ++HP Y GK GMR +H+ N + ++ +LW M+P++ + + + VP+IDV +FGY V+G G L +P+VVKA+ + +A+++I + GG ++T Sbjct: 47 RFHPDYHGKRGMRVYHRKENSDYARPISSARLWGMIPKEQRYDFLDNPEKVPVIDVREFGYHVVVG-GKLSLERPIVVKARYFTPSAKEEITKVGGKWIIT 146 The following BLAST results are available for this feature:
BLAST of CX300751 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX300751 ID=CX300751; Name=CX300751; organism=Citrus sinensis; type=EST; length=521bpback to top |