CX300731
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300731 vs. ExPASy Swiss-Prot
Match: TBAL3_HUMAN (Tubulin alpha chain-like 3 OS=Homo sapiens GN=TUBAL3 PE=1 SV=2) HSP 1 Score: 253.447 bits (646), Expect = 3.479e-67 Identity = 113/156 (72.44%), Postives = 137/156 (87.82%), Query Frame = 3 Query: 3 TSYAPIISAEKAYHEQLSVHEITNSVFEPSNMLTKCDPRHGKYMACCMMYRGDVVPKDVNSAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVSNTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 470 T++API+SA+KAYHEQ SV +IT + FE SN L KCDPR GKYMACC++YRGDVVPK+VN+A+A K++ +VQFVDWCPTGFK GIN +PPTV+PGGDLA+V R++CM+SNTTAI EA +R+DHKFDLMYAKRAF+HWY+ EGMEE EF EAREDL Sbjct: 277 TAFAPIVSADKAYHEQFSVSDITTACFESSNQLVKCDPRLGKYMACCLLYRGDVVPKEVNAAIAATKSRHSVQFVDWCPTGFKVGINNRPPTVMPGGDLAKVHRSICMLSNTTAIVEAWARLDHKFDLMYAKRAFLHWYLREGMEEAEFLEAREDL 432
BLAST of CX300731 vs. ExPASy Swiss-Prot
Match: TBA2_NEUCR (Tubulin alpha-B chain OS=Neurospora crassa GN=tba-2 PE=2 SV=2) HSP 1 Score: 253.062 bits (645), Expect = 4.543e-67 Identity = 118/155 (76.13%), Postives = 133/155 (85.81%), Query Frame = 3 Query: 6 SYAPIISAEKAYHEQLSVHEITNSVFEPSNMLTKCDPRHGKYMACCMMYRGDVVPKDVNSAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVSNTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 470 +YAP+ISA KA HE SV E+T S FEP+N + KCDPRHGKYMA C++YRGDVVP D ++AVAT+KTKRT+QFVDWCPTGFK GI YQPP VP GDLA+V RAVCM+SNTTAIAEA S + KFDLMY+KRAFVHWYVGEGMEEGEFSEAREDL Sbjct: 271 AYAPVISAAKAAHEANSVQEMTMSCFEPNNQMVKCDPRHGKYMATCLLYRGDVVPNDAHAAVATLKTKRTIQFVDWCPTGFKLGICYQPPHQVPNGDLAKVNRAVCMLSNTTAIAEAWSALSSKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDL 425
BLAST of CX300731 vs. ExPASy Swiss-Prot
Match: TBA1_SCHPO (Tubulin alpha-1 chain OS=Schizosaccharomyces pombe GN=nda2 PE=2 SV=2) HSP 1 Score: 249.595 bits (636), Expect = 5.023e-66 Identity = 112/155 (72.26%), Postives = 134/155 (86.45%), Query Frame = 3 Query: 6 SYAPIISAEKAYHEQLSVHEITNSVFEPSNMLTKCDPRHGKYMACCMMYRGDVVPKDVNSAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVSNTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 470 +Y+PI+SA KA+HE SV EITN FEP N + KCDPR G+YMA C++YRGDV+P+DV +AV +IK++RT+QFVDWCPTGFK GI Y+PP VPG +A+V RAVCM+SNTT+IAEA SR+DHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDL Sbjct: 275 TYSPIVSAAKAFHESNSVQEITNQCFEPYNQMVKCDPRTGRYMATCLLYRGDVIPRDVQAAVTSIKSRRTIQFVDWCPTGFKIGICYEPPQHVPGSGIAKVNRAVCMLSNTTSIAEAWSRLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDL 429
BLAST of CX300731 vs. ExPASy Swiss-Prot
Match: TBAA_SCHCO (Tubulin alpha-1A chain OS=Schizophyllum commune GN=TUB-1A PE=3 SV=1) HSP 1 Score: 246.514 bits (628), Expect = 4.252e-65 Identity = 113/153 (73.86%), Postives = 132/153 (86.27%), Query Frame = 3 Query: 12 APIISAEKAYHEQLSVHEITNSVFEPSNMLTKCDPRHGKYMACCMMYRGDVVPKDVNSAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVSNTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 470 API+S +KA HE SV E+T S FEP N + KCDPR GKYMAC ++YRGDVVPKD N+AVA IKTKRT+QFVDWCPTGFK GI +PP VPGGDLA+V+R++CM+SNTTAI+ A SR+DHKFDL+Y+KRAFVHWYVGEGMEEGEFSEAR+DL Sbjct: 272 APIVSVDKAGHESNSVAEMTYSCFEPGNQMVKCDPRDGKYMACALLYRGDVVPKDTNAAVALIKTKRTIQFVDWCPTGFKLGICNEPPAHVPGGDLAKVKRSMCMLSNTTAISSAWSRLDHKFDLLYSKRAFVHWYVGEGMEEGEFSEARQDL 424
BLAST of CX300731 vs. ExPASy Swiss-Prot
Match: TBA8_CAEEL (Tubulin alpha-8 chain OS=Caenorhabditis elegans GN=tba-8 PE=2 SV=2) HSP 1 Score: 246.514 bits (628), Expect = 4.252e-65 Identity = 110/155 (70.97%), Postives = 134/155 (86.45%), Query Frame = 3 Query: 6 SYAPIISAEKAYHEQLSVHEITNSVFEPSNMLTKCDPRHGKYMACCMMYRGDVVPKDVNSAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVSNTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 470 +YAP+ISA++A+HE LSV +IT+ FE +N + KCDP GKYMA C++YRGDVVPKDVN+A++++K KR + FVDWCPTGFK GINYQ P V GGDLA+V RAVCM+SNTTAIAEA +R+DHKFDLMY+KRAFVHW+VGEGMEEGEF EAR+DL Sbjct: 274 TYAPVISADRAHHEPLSVQDITHMCFEKANQMVKCDPSAGKYMAVCLLYRGDVVPKDVNAAISSVKAKRGINFVDWCPTGFKVGINYQAPITVEGGDLAKVHRAVCMLSNTTAIAEAWARLDHKFDLMYSKRAFVHWFVGEGMEEGEFMEARDDL 428
BLAST of CX300731 vs. ExPASy Swiss-Prot
Match: TBA2_SCHPO (Tubulin alpha-2 chain OS=Schizosaccharomyces pombe GN=tub1 PE=1 SV=2) HSP 1 Score: 246.514 bits (628), Expect = 4.252e-65 Identity = 112/155 (72.26%), Postives = 132/155 (85.16%), Query Frame = 3 Query: 6 SYAPIISAEKAYHEQLSVHEITNSVFEPSNMLTKCDPRHGKYMACCMMYRGDVVPKDVNSAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVSNTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 470 +YAPI+SA KA+HE SV EITN FEP N + KCDPR G+YMA C++YRGDV+P+DV +AV TIK KRT+QFVDWCPTGFK GI +PP + G ++A+V RAVCM+SNTT+IAEA SR+DHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDL Sbjct: 271 TYAPIVSAAKAFHESNSVQEITNQCFEPYNQMVKCDPRAGRYMATCLLYRGDVIPRDVQAAVTTIKAKRTIQFVDWCPTGFKIGICDRPPQHIEGSEIAKVDRAVCMLSNTTSIAEAWSRLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDL 425
BLAST of CX300731 vs. ExPASy Swiss-Prot
Match: TBA_GIBZE (Tubulin alpha chain OS=Gibberella zeae GN=TUB1 PE=3 SV=2) HSP 1 Score: 246.128 bits (627), Expect = 5.554e-65 Identity = 115/155 (74.19%), Postives = 132/155 (85.16%), Query Frame = 3 Query: 6 SYAPIISAEKAYHEQLSVHEITNSVFEPSNMLTKCDPRHGKYMACCMMYRGDVVPKDVNSAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVSNTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 470 +Y+P+ISA KA HE SV E+T S FEP+N + KCDPRHGKYMA C++YRGDVVP D ++AVAT+KTKRT+QFVDWCPTGFK GI YQ P VP GDLA+V RAVCM+SNTTAIAEA S + KFDLM++KRAFVHWYVGEGMEEGEFSEAREDL Sbjct: 271 AYSPVISAAKAAHEANSVQEMTMSCFEPNNQMVKCDPRHGKYMATCLLYRGDVVPNDAHAAVATLKTKRTIQFVDWCPTGFKLGICYQAPENVPNGDLAKVSRAVCMLSNTTAIAEAWSSLSLKFDLMHSKRAFVHWYVGEGMEEGEFSEAREDL 425
BLAST of CX300731 vs. ExPASy Swiss-Prot
Match: TBA_SORMA (Tubulin alpha chain OS=Sordaria macrospora GN=TUBA PE=3 SV=1) HSP 1 Score: 245.358 bits (625), Expect = 9.473e-65 Identity = 115/155 (74.19%), Postives = 131/155 (84.52%), Query Frame = 3 Query: 6 SYAPIISAEKAYHEQLSVHEITNSVFEPSNMLTKCDPRHGKYMACCMMYRGDVVPKDVNSAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVSNTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 470 +YAP+ISA KA HE SV E+T S FEP+N + KCDPRHGKYMA C++Y GDVVP D ++AVA++KTKRT+QFVDWCPTGFK GI YQPP VP GDLA+V RAVCM+SNTTAIAEA S + KFDLMY+KRAFVHWYVGEGMEEGEFSEARE L Sbjct: 271 AYAPVISAAKAAHEANSVQEMTMSCFEPNNQMVKCDPRHGKYMATCLLYGGDVVPNDAHAAVASLKTKRTIQFVDWCPTGFKLGICYQPPHQVPNGDLAKVNRAVCMLSNTTAIAEAWSALSSKFDLMYSKRAFVHWYVGEGMEEGEFSEAREVL 425
BLAST of CX300731 vs. ExPASy Swiss-Prot
Match: TBA_ASHGO (Tubulin alpha chain OS=Ashbya gossypii GN=TUB1 PE=3 SV=1) HSP 1 Score: 240.736 bits (613), Expect = 2.333e-63 Identity = 112/155 (72.26%), Postives = 127/155 (81.94%), Query Frame = 3 Query: 6 SYAPIISAEKAYHEQLSVHEITNSVFEPSNMLTKCDPRHGKYMACCMMYRGDVVPKDVNSAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVSNTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 470 SYAPI+S KA+HE SV EITN+ FEP N + KCDPR GKYMA C++YRGDVV +DV +AVA +K K+TVQ VDWCPTGFK GI Y+PPT P L+ V RAVCM+SNTTAIA+A RID KFDLMYAKRAFVHWYVGEGMEEGEF+EAREDL Sbjct: 273 SYAPILSKSKAHHESNSVGEITNACFEPGNQMVKCDPRVGKYMATCLLYRGDVVTRDVQTAVAQVKNKKTVQLVDWCPTGFKIGICYEPPTATPNSQLSSVSRAVCMLSNTTAIADAWKRIDRKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDL 427
BLAST of CX300731 vs. ExPASy Swiss-Prot
Match: TBA1_YEAST (Tubulin alpha-1 chain OS=Saccharomyces cerevisiae GN=TUB1 PE=1 SV=2) HSP 1 Score: 239.195 bits (609), Expect = 6.789e-63 Identity = 110/155 (70.97%), Postives = 125/155 (80.65%), Query Frame = 3 Query: 6 SYAPIISAEKAYHEQLSVHEITNSVFEPSNMLTKCDPRHGKYMACCMMYRGDVVPKDVNSAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVSNTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 470 SY+P++S KA+HE SV EITN+ FEP N + KCDPR GKYMA C++YRGDVV +DV AV +K K+TVQ VDWCPTGFK GI Y+PPT P LA V RAVCM+SNTT+IAEA RID KFDLMYAKRAFVHWYVGEGMEEGEF+EAREDL Sbjct: 272 SYSPVLSKSKAFHESNSVSEITNACFEPGNQMVKCDPRDGKYMATCLLYRGDVVTRDVQRAVEQVKNKKTVQLVDWCPTGFKIGICYEPPTATPNSQLATVDRAVCMLSNTTSIAEAWKRIDRKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDL 426 The following BLAST results are available for this feature:
BLAST of CX300731 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 379
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300731 ID=CX300731; Name=CX300731; organism=Citrus sinensis; type=EST; length=470bpback to top |