CX300731
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300731 vs. ExPASy Swiss-Prot
Match: TBA4_DROME (Tubulin alpha-4 chain OS=Drosophila melanogaster GN=alphaTub67C PE=1 SV=1) HSP 1 Score: 238.81 bits (608), Expect = 8.867e-63 Identity = 106/155 (68.39%), Postives = 132/155 (85.16%), Query Frame = 3 Query: 6 SYAPIISAEKAYHEQLSVHEITNSVFEPSNMLTKCDPRHGKYMACCMMYRGDVVPKDVNSAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVSNTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 470 +YAP++SAE++ HEQ ++ +TN+ FE SNM+ KCDPR GK+MACCM+YRGDVVPKDVN+AV+ IK+KR +QFVDWCPTGFK GINY+ P VP GDLA+ RA CM+SNTTAI+ A S + +KFDLM+ KRAFVHWYVGEGMEEGEF+EARE++ Sbjct: 282 AYAPLMSAERSAHEQHAITTLTNACFESSNMMVKCDPRAGKFMACCMLYRGDVVPKDVNAAVSAIKSKRHIQFVDWCPTGFKIGINYEKPAFVPDGDLAKTSRACCMLSNTTAISVAFSNLSYKFDLMFKKRAFVHWYVGEGMEEGEFTEARENI 436
BLAST of CX300731 vs. ExPASy Swiss-Prot
Match: TBA_CANAL (Tubulin alpha chain OS=Candida albicans GN=TUB1 PE=3 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 1.512e-62 Identity = 111/155 (71.61%), Postives = 126/155 (81.29%), Query Frame = 3 Query: 6 SYAPIISAEKAYHEQLSVHEITNSVFEPSNMLTKCDPRHGKYMACCMMYRGDVVPKDVNSAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVSNTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 470 SYAP+ S +A HE SV EIT S FEP N + KCDPR GKYMA C++YRGDVV +DV +AVA +K+K+TVQ VDWCPTGFK GI YQPPT + G +LA RAVCM+SNTTAIAEA RID KFDLMY+KRAFVHWYVGEGMEEGEF+EAREDL Sbjct: 272 SYAPVFSKSRATHEANSVSEITQSCFEPGNQMVKCDPRTGKYMATCLLYRGDVVTRDVQNAVAQVKSKKTVQLVDWCPTGFKIGICYQPPTAIKGSELASASRAVCMLSNTTAIAEAWRRIDRKFDLMYSKRAFVHWYVGEGMEEGEFTEAREDL 426
BLAST of CX300731 vs. ExPASy Swiss-Prot
Match: TBAB_SCHCO (Tubulin alpha-1B chain OS=Schizophyllum commune GN=TUB-1B PE=3 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 1.512e-62 Identity = 109/155 (70.32%), Postives = 129/155 (83.23%), Query Frame = 3 Query: 6 SYAPIISAEKAYHEQLSVHEITNSVFEPSNMLTKCDPRHGKYMACCMMYRGDVVPKDVNSAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVSNTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 470 SYAP++SA + HEQ SV E+T S FE N + KCD + GKYMACC++YRGDVVPKD +AVA+IKTKRT+QFVDWCPTGFK G+ + P VPGGDLA+V R++CM+SNTTAIA A +R+D+KFDLMY KRAFVHWYVGE MEEGEFSEAREDL Sbjct: 269 SYAPLLSAPRRQHEQNSVEEMTFSCFESGNQMVKCDAKDGKYMACCLLYRGDVVPKDTQAAVASIKTKRTIQFVDWCPTGFKLGVCNEAPATVPGGDLAKVPRSLCMLSNTTAIAAAWNRLDYKFDLMYRKRAFVHWYVGEAMEEGEFSEAREDL 423
BLAST of CX300731 vs. ExPASy Swiss-Prot
Match: TBAA_PNECA (Tubulin alpha chain (Fragment) OS=Pneumocystis carinii GN=TUB-A PE=3 SV=1) HSP 1 Score: 237.654 bits (605), Expect = 1.975e-62 Identity = 108/145 (74.48%), Postives = 126/145 (86.90%), Query Frame = 3 Query: 6 SYAPIISAEKAYHEQLSVHEITNSVFEPSNMLTKCDPRHGKYMACCMMYRGDVVPKDVNSAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVSNTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEE 440 +YAP+ISA KA HE SV EITN+ FEP+N + KCDPR+GKYMA C++YRGDVV KDVN+AVA ++TKRT+QFVDWCPTGFK G+ YQPP VP GDLA+V RAVCM+SNTT+IAEA R+DHKFDLMY+KRAFVHWYVGEGMEE Sbjct: 68 TYAPVISAAKAVHEANSVSEITNACFEPNNQMVKCDPRNGKYMATCLLYRGDVVTKDVNAAVAAVRTKRTIQFVDWCPTGFKLGVCYQPPQHVPHGDLAKVDRAVCMLSNTTSIAEAWPRLDHKFDLMYSKRAFVHWYVGEGMEE 212
BLAST of CX300731 vs. ExPASy Swiss-Prot
Match: TBA3_YEAST (Tubulin alpha-3 chain OS=Saccharomyces cerevisiae GN=TUB3 PE=1 SV=1) HSP 1 Score: 237.269 bits (604), Expect = 2.580e-62 Identity = 110/155 (70.97%), Postives = 127/155 (81.94%), Query Frame = 3 Query: 6 SYAPIISAEKAYHEQLSVHEITNSVFEPSNMLTKCDPRHGKYMACCMMYRGDVVPKDVNSAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVSNTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 470 SYAPI+S ++A HE SV EITN+ FEP N + KCDP GKYMA C++YRGDVV +DV AV +K K+TVQ VDWCPTGFK GI Y+PP+V+P +LA V RAVCM+SNTTAIA+A RID KFDLMYAKRAFVHWYVGEGMEEGEF+EAREDL Sbjct: 272 SYAPILSKKRATHESNSVSEITNACFEPGNQMVKCDPTKGKYMANCLLYRGDVVTRDVQRAVEQVKNKKTVQMVDWCPTGFKIGICYEPPSVIPSSELANVDRAVCMLSNTTAIADAWKRIDQKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDL 426
BLAST of CX300731 vs. ExPASy Swiss-Prot
Match: TBA_ENCCU (Tubulin alpha chain OS=Encephalitozoon cuniculi GN=TUB1 PE=3 SV=1) HSP 1 Score: 229.95 bits (585), Expect = 4.119e-60 Identity = 104/155 (67.10%), Postives = 129/155 (83.23%), Query Frame = 3 Query: 6 SYAPIISAEKAYHEQLSVHEITNSVFEPSNMLTKCDPRHGKYMACCMMYRGDVVPKDVNSAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVSNTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 470 +Y+P++S EKA HE+LSV EITN+ FEP N + +CD R GKYMACC+++RGDV PK+ N+A A +K KRT QFV+WCPTGFK GIN + PTV+ G +A V RAVC +SNTTAI+EA R+++KFDLM++KRAFVHWYVGEGMEEGEFSEAREDL Sbjct: 267 AYSPMLSKEKAAHEKLSVQEITNACFEPQNQMVRCDTRKGKYMACCLLFRGDVNPKEANNATANVKAKRTNQFVEWCPTGFKVGINSRKPTVLDGEAMAEVSRAVCALSNTTAISEAWKRLNNKFDLMFSKRAFVHWYVGEGMEEGEFSEAREDL 421
BLAST of CX300731 vs. ExPASy Swiss-Prot
Match: TBA_AJECA (Tubulin alpha chain (Fragment) OS=Ajellomyces capsulata GN=TUB1 PE=3 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 5.035e-58 Identity = 105/148 (70.95%), Postives = 125/148 (84.46%), Query Frame = 3 Query: 6 SYAPIISAEKAYHEQLSVHEITNSVFEPSNMLTKCDPRHGKYMACCMMYRGDVVPKDVNSAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVSNTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEF 449 SY+P++SA KA HE SV E+T FEP+N + KCDPR+GKYMA C++YRGDVVPKDV++ AT+KTKRTVQFVD PTGFK GI YQPPT+VP GDLA+V RA CM+SNTTAI+EA + + HKFDL+Y+KRAFVHWYVGEGMEEGEF Sbjct: 272 SYSPVVSAGKASHESNSVMEVTIVCFEPNNQMVKCDPRNGKYMATCLLYRGDVVPKDVHAVAATLKTKRTVQFVDLQPTGFKIGICYQPPTMVPNGDLAKVNRA-CMLSNTTAISEAWTALSHKFDLIYSKRAFVHWYVGEGMEEGEF 418
BLAST of CX300731 vs. ExPASy Swiss-Prot
Match: TBA2_EMENI (Tubulin alpha-2 chain OS=Emericella nidulans GN=tubB PE=3 SV=2) HSP 1 Score: 218.779 bits (556), Expect = 9.495e-57 Identity = 99/155 (63.87%), Postives = 122/155 (78.71%), Query Frame = 3 Query: 6 SYAPIISAEKAYHEQLSVHEITNSVFEPSNMLTKCDPRHGKYMACCMMYRGDVVPKDVNSAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVSNTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 470 SYAP+IS+ ++ HE V ++T EP+N + CDPR+GKYMA ++YRGD VP+D A+A++K K + V+WCPTGFK GINYQ P VPG +LA V R+V M+SNTTAI+EA SR+DHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDL Sbjct: 273 SYAPVISSNRSSHESFKVQDLTLQCAEPNNQMVVCDPRNGKYMAVALLYRGDCVPRDCTQAIASLKAKASFNLVEWCPTGFKVGINYQKPARVPGSELAPVDRSVSMLSNTTAISEAWSRLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDL 427
BLAST of CX300731 vs. ExPASy Swiss-Prot
Match: TBA1_NEUCR (Tubulin alpha-A chain OS=Neurospora crassa GN=tba-1 PE=2 SV=3) HSP 1 Score: 218.009 bits (554), Expect = 1.620e-56 Identity = 104/160 (65.00%), Postives = 123/160 (76.88%), Query Frame = 3 Query: 6 SYAPIISAEKAYHEQLSVHEITNSVFEPSNMLTKCDPRHGKYMACCMMYRGDVVPKDVNSAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVP-----GGDLARVQRAVCMVSNTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 470 SYAP+ISA K+ HE E+T FEP+N + CDPR+GKYMA ++YRGDVVP+D ++AVA +K K + V+WCPTGFK GIN+Q P VP G LA V R+V M+SNTTAIAEA SR+DHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDL Sbjct: 272 SYAPVISATKSAHESFKTSELTLQCFEPNNQMVVCDPRNGKYMAVALLYRGDVVPRDTSAAVAALKAKSSFNLVEWCPTGFKIGINHQKPMSVPTASPADGGLASVDRSVSMLSNTTAIAEAWSRLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDL 431
BLAST of CX300731 vs. ExPASy Swiss-Prot
Match: TBA_DICDI (Tubulin alpha chain OS=Dictyostelium discoideum GN=tubA PE=1 SV=1) HSP 1 Score: 217.624 bits (553), Expect = 2.115e-56 Identity = 98/157 (62.42%), Postives = 124/157 (78.98%), Query Frame = 3 Query: 6 SYAPIISAEKAYHEQLSVHEITNSVFEPSNMLTKCDPRHGKYMACCMMYRGDVVPKDVNSAVATIKTK--RTVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVSNTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 470 SYAP+IS EKA+HE ++V IT++VF N++ KC P GKYMACC+MYRGD+VPK+ AV I+++ R V FVDW PTGFKCGIN Q P ++A V+++VCM+SNTTAI++ SRI+HKFDLM+ KRAFVHWYVGEGMEEGEF+EAR+DL Sbjct: 278 SYAPVISREKAHHETITVDNITSAVFSEKNIMAKCQPNLGKYMACCLMYRGDIVPKEAQKAVQNIRSEKSRNVSFVDWSPTGFKCGINNQAPVSTKDSEMAEVKKSVCMLSNTTAISQVFSRINHKFDLMFVKRAFVHWYVGEGMEEGEFAEARDDL 434 The following BLAST results are available for this feature:
BLAST of CX300731 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 379
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300731 ID=CX300731; Name=CX300731; organism=Citrus sinensis; type=EST; length=470bpback to top |