CX300731
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300731 vs. ExPASy Swiss-Prot
Match: TBA1_VOLCA (Tubulin alpha-1/alpha-2 chain OS=Volvox carteri GN=TUBA1 PE=3 SV=1) HSP 1 Score: 301.982 bits (772), Expect = 8.529e-82 Identity = 138/156 (88.46%), Postives = 150/156 (96.15%), Query Frame = 3 Query: 3 TSYAPIISAEKAYHEQLSVHEITNSVFEPSNMLTKCDPRHGKYMACCMMYRGDVVPKDVNSAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVSNTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 470 +SYAPIISAEKAYHEQLSV EITN+ FEP++M+ KCDPRHGKYMACC+MYRGDVVPKDVN+AVATIKTKRT+QFVDWCPTGFKCGINYQPPTVVPGGDLA+VQRAVCM+SN+TAI E SR+DHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL Sbjct: 270 SSYAPIISAEKAYHEQLSVAEITNAAFEPASMMVKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTAIGEIFSRLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 425
BLAST of CX300731 vs. ExPASy Swiss-Prot
Match: TBA1_MAIZE (Tubulin alpha-1 chain OS=Zea mays GN=TUBA1 PE=3 SV=1) HSP 1 Score: 301.982 bits (772), Expect = 8.529e-82 Identity = 137/156 (87.82%), Postives = 150/156 (96.15%), Query Frame = 3 Query: 3 TSYAPIISAEKAYHEQLSVHEITNSVFEPSNMLTKCDPRHGKYMACCMMYRGDVVPKDVNSAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVSNTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 470 +SYAP+ISAEKAYHEQLSV EITNS FEPS+M+ KCDPRHGKYMACC+MYRGDVVPKDVN+AVATIKTKRT+QFVDWCPTGFKCGINYQPP+VVPGGDLA+VQRAVCM+SN+T++ E SRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL Sbjct: 270 SSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNSTSVVEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 425
BLAST of CX300731 vs. ExPASy Swiss-Prot
Match: TBA1_ELEIN (Tubulin alpha-1 chain OS=Eleusine indica GN=TUBA1 PE=2 SV=1) HSP 1 Score: 301.982 bits (772), Expect = 8.529e-82 Identity = 137/156 (87.82%), Postives = 150/156 (96.15%), Query Frame = 3 Query: 3 TSYAPIISAEKAYHEQLSVHEITNSVFEPSNMLTKCDPRHGKYMACCMMYRGDVVPKDVNSAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVSNTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 470 +SYAP+ISAEKAYHEQLSV EITNS FEPS+M+ KCDPRHGKYMACC+MYRGDVVPKDVN+AVATIKTKRT+QFVDWCPTGFKCGINYQPP+VVPGGDLA+VQRAVCM+SN+T++ E SRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL Sbjct: 270 SSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNSTSVVEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 425
BLAST of CX300731 vs. ExPASy Swiss-Prot
Match: TBA3_ARATH (Tubulin alpha-3/alpha-5 chain OS=Arabidopsis thaliana GN=TUBA3 PE=2 SV=1) HSP 1 Score: 301.597 bits (771), Expect = 1.114e-81 Identity = 138/156 (88.46%), Postives = 149/156 (95.51%), Query Frame = 3 Query: 3 TSYAPIISAEKAYHEQLSVHEITNSVFEPSNMLTKCDPRHGKYMACCMMYRGDVVPKDVNSAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVSNTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 470 +SYAP+ISA KAYHEQLSV EITN+VFEP++M+ KCDPRHGKYMACC+MYRGDVVPKDVN+AV TIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLA+VQRAVCM+SN TA+AE SRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL Sbjct: 270 SSYAPVISAAKAYHEQLSVPEITNAVFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 425
BLAST of CX300731 vs. ExPASy Swiss-Prot
Match: TBA_PLAYO (Tubulin alpha chain OS=Plasmodium yoelii yoelii GN=PY01155 PE=2 SV=2) HSP 1 Score: 301.212 bits (770), Expect = 1.455e-81 Identity = 137/156 (87.82%), Postives = 149/156 (95.51%), Query Frame = 3 Query: 3 TSYAPIISAEKAYHEQLSVHEITNSVFEPSNMLTKCDPRHGKYMACCMMYRGDVVPKDVNSAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVSNTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 470 +SYAP++SAEKAYHEQLSV EITNS FEP+NM+ KCDPRHGKYMACC+MYRGDVVPKDVN+AVATIKTKRT+QFVDWCPTGFKCGINYQPPTVVPGGDLA+V RAVCM+SN+TAIAE SR+D KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL Sbjct: 270 SSYAPVVSAEKAYHEQLSVSEITNSAFEPANMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVMRAVCMISNSTAIAEVFSRMDQKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 425
BLAST of CX300731 vs. ExPASy Swiss-Prot
Match: TBA_PLAFK (Tubulin alpha chain OS=Plasmodium falciparum (isolate K1 / Thailand) PE=3 SV=1) HSP 1 Score: 301.212 bits (770), Expect = 1.455e-81 Identity = 137/156 (87.82%), Postives = 149/156 (95.51%), Query Frame = 3 Query: 3 TSYAPIISAEKAYHEQLSVHEITNSVFEPSNMLTKCDPRHGKYMACCMMYRGDVVPKDVNSAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVSNTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 470 +SYAP++SAEKAYHEQLSV EITNS FEP+NM+ KCDPRHGKYMACC+MYRGDVVPKDVN+AVATIKTKRT+QFVDWCPTGFKCGINYQPPTVVPGGDLA+V RAVCM+SN+TAIAE SR+D KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL Sbjct: 270 SSYAPVVSAEKAYHEQLSVSEITNSAFEPANMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVMRAVCMISNSTAIAEVFSRMDQKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 425
BLAST of CX300731 vs. ExPASy Swiss-Prot
Match: TBA_EUGGR (Tubulin alpha chain OS=Euglena gracilis GN=TUBA PE=2 SV=1) HSP 1 Score: 301.212 bits (770), Expect = 1.455e-81 Identity = 137/156 (87.82%), Postives = 151/156 (96.79%), Query Frame = 3 Query: 3 TSYAPIISAEKAYHEQLSVHEITNSVFEPSNMLTKCDPRHGKYMACCMMYRGDVVPKDVNSAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVSNTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 470 +SYAPIISAEKAYHEQLSV EITN+ FEP++M+ KCDPRHGKYMACC+MYRGDVVPKDVN++VATIKTKRT+QFVDWCPTGFKCGINYQPPTVVPGGDLA+VQRAVCM+SN+TAIAE +RIDHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDL Sbjct: 270 SSYAPIISAEKAYHEQLSVAEITNAAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNASVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTAIAEVFARIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDL 425
BLAST of CX300731 vs. ExPASy Swiss-Prot
Match: TBA1_NAEGR (Tubulin alpha-1/2/3 chain OS=Naegleria gruberi GN=TBA1 PE=2 SV=1) HSP 1 Score: 301.212 bits (770), Expect = 1.455e-81 Identity = 139/155 (89.68%), Postives = 149/155 (96.13%), Query Frame = 3 Query: 6 SYAPIISAEKAYHEQLSVHEITNSVFEPSNMLTKCDPRHGKYMACCMMYRGDVVPKDVNSAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVSNTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 470 SYAP+ISAEKAYHEQLSV EITNS FEP++M+ KCDPRHGKYMACC+MYRGDVVPKDVN+AVATIKTKRT+QFVDW PTGFKCGINYQPPTVVPGGDLA+VQRAVCM+SN+TAIAE SRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL Sbjct: 271 SYAPVISAEKAYHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWSPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTAIAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 425
BLAST of CX300731 vs. ExPASy Swiss-Prot
Match: TBA13_NAEGR (Tubulin alpha-13 chain OS=Naegleria gruberi GN=TUBA13 PE=2 SV=1) HSP 1 Score: 301.212 bits (770), Expect = 1.455e-81 Identity = 139/155 (89.68%), Postives = 149/155 (96.13%), Query Frame = 3 Query: 6 SYAPIISAEKAYHEQLSVHEITNSVFEPSNMLTKCDPRHGKYMACCMMYRGDVVPKDVNSAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVSNTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 470 SYAP+ISAEKAYHEQLSV EITNS FEP++M+ KCDPRHGKYMACC+MYRGDVVPKDVN+AVATIKTKRT+QFVDW PTGFKCGINYQPPTVVPGGDLA+VQRAVCM+SN+TAIAE SRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL Sbjct: 271 SYAPVISAEKAYHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWSPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTAIAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 425
BLAST of CX300731 vs. ExPASy Swiss-Prot
Match: TBA_WHEAT (Tubulin alpha chain OS=Triticum aestivum GN=TUBA PE=2 SV=1) HSP 1 Score: 300.827 bits (769), Expect = 1.900e-81 Identity = 137/156 (87.82%), Postives = 149/156 (95.51%), Query Frame = 3 Query: 3 TSYAPIISAEKAYHEQLSVHEITNSVFEPSNMLTKCDPRHGKYMACCMMYRGDVVPKDVNSAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVSNTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 470 +SYAP+ISAEKAYHEQLSV EITNS FEPS+M+ KCDPRHGKYMACC+MYRGDVVPKDVN+AVATIKTKRT+QFVDWCPTGFKCGINYQPP VVPGGDLA+VQRAVCM+SN+T++ E SRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL Sbjct: 270 SSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPGVVPGGDLAKVQRAVCMISNSTSVVEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 425 The following BLAST results are available for this feature:
BLAST of CX300731 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 379
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300731 ID=CX300731; Name=CX300731; organism=Citrus sinensis; type=EST; length=470bpback to top |