CX300731
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300731 vs. ExPASy Swiss-Prot
Match: TBA_TRYBR (Tubulin alpha chain OS=Trypanosoma brucei rhodesiense PE=3 SV=1) HSP 1 Score: 300.827 bits (769), Expect = 1.900e-81 Identity = 137/156 (87.82%), Postives = 152/156 (97.44%), Query Frame = 3 Query: 3 TSYAPIISAEKAYHEQLSVHEITNSVFEPSNMLTKCDPRHGKYMACCMMYRGDVVPKDVNSAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVSNTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 470 TSYAP+ISAEKAYHEQLSV EI+N+VFEP++M+TKCDPRHGKYMACC+MYRGDVVPKDVN+AVATIKTKRT+QFVDW PTGFKCGINYQPPTVVPGGDLA+VQRAVCM++N+TAIAE +RIDHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDL Sbjct: 270 TSYAPVISAEKAYHEQLSVSEISNAVFEPASMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWSPTGFKCGINYQPPTVVPGGDLAKVQRAVCMIANSTAIAEVFARIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDL 425
BLAST of CX300731 vs. ExPASy Swiss-Prot
Match: TBA6_ARATH (Tubulin alpha-6 chain OS=Arabidopsis thaliana GN=TUBA6 PE=2 SV=1) HSP 1 Score: 300.827 bits (769), Expect = 1.900e-81 Identity = 136/156 (87.18%), Postives = 150/156 (96.15%), Query Frame = 3 Query: 3 TSYAPIISAEKAYHEQLSVHEITNSVFEPSNMLTKCDPRHGKYMACCMMYRGDVVPKDVNSAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVSNTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 470 +SYAP+ISAEKA+HEQLSV EITNS FEP++M+ KCDPRHGKYMACC+MYRGDVVPKDVN+AV TIKTKRT+QFVDWCPTGFKCGINYQPPTVVPGGDLA+VQRAVCM+SN+T++AE SRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL Sbjct: 270 SSYAPVISAEKAFHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 425
BLAST of CX300731 vs. ExPASy Swiss-Prot
Match: TBA2_HORVU (Tubulin alpha-2 chain OS=Hordeum vulgare GN=TUBA2 PE=2 SV=1) HSP 1 Score: 300.827 bits (769), Expect = 1.900e-81 Identity = 137/156 (87.82%), Postives = 149/156 (95.51%), Query Frame = 3 Query: 3 TSYAPIISAEKAYHEQLSVHEITNSVFEPSNMLTKCDPRHGKYMACCMMYRGDVVPKDVNSAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVSNTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 470 +SYAP+ISAEKAYHEQLSV EITNS FEPS+M+ KCDPRHGKYMACC+MYRGDVVPKDVN+AVATIKTKRT+QFVDWCPTGFKCGINYQPP VVPGGDLA+VQRAVCM+SN+T++ E SRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL Sbjct: 270 SSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPGVVPGGDLAKVQRAVCMISNSTSVVEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 425
BLAST of CX300731 vs. ExPASy Swiss-Prot
Match: TBA2_ARATH (Tubulin alpha-2/alpha-4 chain OS=Arabidopsis thaliana GN=TUBA2 PE=2 SV=1) HSP 1 Score: 300.827 bits (769), Expect = 1.900e-81 Identity = 136/156 (87.18%), Postives = 150/156 (96.15%), Query Frame = 3 Query: 3 TSYAPIISAEKAYHEQLSVHEITNSVFEPSNMLTKCDPRHGKYMACCMMYRGDVVPKDVNSAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVSNTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 470 +SYAP+ISAEKA+HEQLSV EITNS FEP++M+ KCDPRHGKYMACC+MYRGDVVPKDVN+AV TIKTKRT+QFVDWCPTGFKCGINYQPPTVVPGGDLA+VQRAVCM+SN+T++AE SRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL Sbjct: 270 SSYAPVISAEKAFHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 425
BLAST of CX300731 vs. ExPASy Swiss-Prot
Match: TBA1_CHLRE (Tubulin alpha-1 chain OS=Chlamydomonas reinhardtii GN=TUBA1 PE=1 SV=1) HSP 1 Score: 300.827 bits (769), Expect = 1.900e-81 Identity = 137/156 (87.82%), Postives = 150/156 (96.15%), Query Frame = 3 Query: 3 TSYAPIISAEKAYHEQLSVHEITNSVFEPSNMLTKCDPRHGKYMACCMMYRGDVVPKDVNSAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVSNTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 470 +SYAPIISAEKAYHEQLSV EITN+ FEP++M+ KCDPRHGKYMACC+MYRGDVVPKDVN++VATIKTKRT+QFVDWCPTGFKCGINYQPPTVVPGGDLA+VQRAVCM+SN+TAI E SR+DHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL Sbjct: 270 SSYAPIISAEKAYHEQLSVAEITNAAFEPASMMVKCDPRHGKYMACCLMYRGDVVPKDVNASVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTAIGEIFSRLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 425
BLAST of CX300731 vs. ExPASy Swiss-Prot
Match: TBA_EUPOC (Tubulin alpha chain OS=Euplotes octocarinatus PE=3 SV=1) HSP 1 Score: 300.056 bits (767), Expect = 3.241e-81 Identity = 139/156 (89.10%), Postives = 149/156 (95.51%), Query Frame = 3 Query: 3 TSYAPIISAEKAYHEQLSVHEITNSVFEPSNMLTKCDPRHGKYMACCMMYRGDVVPKDVNSAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVSNTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 470 +SYAP+ISAEKAYHEQLSV EITNS FEP++M+ KCDPRHGKYMACCMMYRGDVVPKDVN+AVATIKTKRT+QFVDW PTGFKCGINYQPPTVVPGGDLA+V RAVCM+SN+TAIAE SRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL Sbjct: 270 SSYAPVISAEKAYHEQLSVAEITNSSFEPASMMAKCDPRHGKYMACCMMYRGDVVPKDVNAAVATIKTKRTIQFVDWSPTGFKCGINYQPPTVVPGGDLAKVMRAVCMISNSTAIAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 425
BLAST of CX300731 vs. ExPASy Swiss-Prot
Match: TBA2_ANEPH (Tubulin alpha-2 chain (Fragment) OS=Anemia phyllitidis GN=TUBA2 PE=2 SV=1) HSP 1 Score: 300.056 bits (767), Expect = 3.241e-81 Identity = 138/156 (88.46%), Postives = 149/156 (95.51%), Query Frame = 3 Query: 3 TSYAPIISAEKAYHEQLSVHEITNSVFEPSNMLTKCDPRHGKYMACCMMYRGDVVPKDVNSAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVSNTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 470 +SYAP+ISA KAYHEQLSV EITN+VFEPS+M+ KCDPRHGKYMACC+MYRGDVVPKDVN+AVATIKTKRTVQFVDWCPTGFKCGINYQPP+VVPGGDLA+VQRAVCM+SN TA+AE SRIDHKFDLMYAK AFVHWYVGEGMEEGEFSEAREDL Sbjct: 186 SSYAPVISAAKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKLAFVHWYVGEGMEEGEFSEAREDL 341
BLAST of CX300731 vs. ExPASy Swiss-Prot
Match: TBA_TRYCR (Tubulin alpha chain OS=Trypanosoma cruzi PE=3 SV=1) HSP 1 Score: 299.671 bits (766), Expect = 4.233e-81 Identity = 136/156 (87.18%), Postives = 152/156 (97.44%), Query Frame = 3 Query: 3 TSYAPIISAEKAYHEQLSVHEITNSVFEPSNMLTKCDPRHGKYMACCMMYRGDVVPKDVNSAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVSNTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 470 T+YAP+ISAEKAYHEQLSV EI+N+VFEP++M+TKCDPRHGKYMACC+MYRGDVVPKDVN+AVATIKTKRT+QFVDW PTGFKCGINYQPPTVVPGGDLA+VQRAVCM++N+TAIAE +RIDHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDL Sbjct: 270 TTYAPVISAEKAYHEQLSVSEISNAVFEPASMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWSPTGFKCGINYQPPTVVPGGDLAKVQRAVCMIANSTAIAEVFARIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDL 425
BLAST of CX300731 vs. ExPASy Swiss-Prot
Match: TBA_AVESA (Tubulin alpha chain OS=Avena sativa GN=TUBA PE=2 SV=1) HSP 1 Score: 298.901 bits (764), Expect = 7.220e-81 Identity = 138/156 (88.46%), Postives = 149/156 (95.51%), Query Frame = 3 Query: 3 TSYAPIISAEKAYHEQLSVHEITNSVFEPSNMLTKCDPRHGKYMACCMMYRGDVVPKDVNSAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVSNTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 470 +SYAP+ISAEKAYHEQLSV EITN+VFEPS+M+ KCDPRHGKYMACC+MYRGDVVPKDVN+AV TIKTKRTVQFVD CPTGFKCGINYQPP+VVPGGDLA+VQRAVCM+SN TA+AE SRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL Sbjct: 270 SSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVVTIKTKRTVQFVDXCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 425
BLAST of CX300731 vs. ExPASy Swiss-Prot
Match: TBA1_APLCA (Tubulin alpha-1 chain OS=Aplysia californica PE=2 SV=1) HSP 1 Score: 298.516 bits (763), Expect = 9.429e-81 Identity = 137/155 (88.39%), Postives = 149/155 (96.13%), Query Frame = 3 Query: 6 SYAPIISAEKAYHEQLSVHEITNSVFEPSNMLTKCDPRHGKYMACCMMYRGDVVPKDVNSAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVSNTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 470 +YAP+ISAEKAYHEQLSV EITN+ FEP+N L KCDPRHGKYMACCM+YRGDVVPKDVN+A+ATIKTKRT+QFVDWCPTGFK GINYQPPTVVPGGDLA+VQRAVCM+SNTTAIAEA +R+DHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL Sbjct: 271 TYAPVISAEKAYHEQLSVAEITNACFEPANQLVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 425 The following BLAST results are available for this feature:
BLAST of CX300731 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 379
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300731 ID=CX300731; Name=CX300731; organism=Citrus sinensis; type=EST; length=470bpback to top |