CX078582
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX078582 vs. ExPASy Swiss-Prot
Match: GAI1_VITVI (DELLA protein GAI1 OS=Vitis vinifera GN=GAI1 PE=2 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.599e-26 Identity = 91/293 (31.06%), Postives = 132/293 (45.05%), Query Frame = 1 Query: 25 FSEISPILQFANFTCNQALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVLRSEGPPSLKITAFASPSTHDELELSFTRENLKHFASEINMPFXXXXXXXXXXXXXXXXXXXRGLESEATAVN--LPIGTFCNYPATFPSVLCFVKQLKPKIVVSLDRGCDRTDVPFPHHMIHALQSYSCLLESLDAVNVN-LDALQKI--ERFL------VYPCIEKIVLGRHHSPERLPPWKSLFMQSGFAPLTFSNFTESQADCLVQR-TPVKGFHVEKRQSSLALCWQRKELILATAWR 867 F E P L+FA+FT NQA+LEAFEG R+H+IDF + G QW +LMQ L LR GPPS ++T PST + L L A I++ F + E+ AVN + + P VL VK +KP IV +++ + F +L YS L +SL+ V+ ++ K+ E +L V C + RH E L W++ +GF P+ + QA L+ G+ VE+ L L W + LI +AW+ Sbjct: 287 FYETCPYLKFAHFTANQAILEAFEGKKRVHVIDFSMKQGMQWPALMQALALRPGGPPSFRLTGIGPPSTDNTDHLHEVGWKLAQLAETIHVEFEYRGFVANSLADLDASMLEL-RDGESVAVNSVFELHSLLARPGGIERVLSAVKDMKPDIVTIVEQEANHNGPVFLDRFTESLHYYSTLFDSLEGCGVSPVNTQDKLMSEVYLGQQICNVVACEGPERVERH---ETLAQWRARLGSAGFDPVNLGSNAFKQASMLLALFAGGDGYRVEENNGCLMLGWHTRPLIATSAWQ 575
BLAST of CX078582 vs. ExPASy Swiss-Prot
Match: GAI_ARATH (DELLA protein GAI OS=Arabidopsis thaliana GN=GAI PE=1 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.728e-26 Identity = 90/291 (30.93%), Postives = 129/291 (44.33%), Query Frame = 1 Query: 25 FSEISPILQFANFTCNQALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVLRSEGPPSLKITAFASPSTHDELELSFTRENLKHFASEINMPF-XXXXXXXXXXXXXXXXXXXRGLESEATAVN--LPIGTFCNYPATFPSVLCFVKQLKPKIVVSLDRGCDRTDVPFPHHMIHALQSYSCLLESLDAVNVNLDALQKIERFL------VYPCIEKIVLGRHHSPERLPPWKSLFMQSGFAPLTFSNFTESQADCLVQR-TPVKGFHVEKRQSSLALCWQRKELILATAWR 867 F E P L+FA+FT NQA+LEAF+G R+H+IDF + G QW +LMQ L LR GPP ++T P+ + L L H A I++ F R E E+ AVN + P VL V Q+KP+I +++ + F +L YS L +SL+ V D + E +L V C + RH E L W++ F +GFA + QA L+ +G+ VE+ L L W + LI +AW+ Sbjct: 243 FYETCPYLKFAHFTANQAILEAFQGKKRVHVIDFSMSQGLQWPALMQALALRPGGPPVFRLTGIGPPAPDNFDYLHEVGCKLAHLAEAIHVEFEYRGFVANTLADLDASMLELRPSEIESVAVNSVFELHKLLGRPGAIDKVLGVVNQIKPEIFTVVEQESNHNSPIFLDRFTESLHYYSTLFDSLEGVPSGQDKVMS-EVYLGKQICNVVACDGPDRVERH---ETLSQWRNRFGSAGFAAAHIGSNAFKQASMLLALFNGGEGYRVEESDGCLMLGWHTRPLIATSAWK 529
BLAST of CX078582 vs. ExPASy Swiss-Prot
Match: RGL3_ARATH (DELLA protein RGL3 OS=Arabidopsis thaliana GN=RGL3 PE=1 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 8.775e-25 Identity = 86/290 (29.66%), Postives = 127/290 (43.79%), Query Frame = 1 Query: 22 SFSEISPILQFANFTCNQALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVLRSEGPPSLKITAFASPSTHDEL-ELSFTRENLKHFASEINMPFXXXXXXXXXXXXXXXXXXXRGLESEATAVN--LPIGTFCNYPATFPSVLCFVKQLKPKIVVSLDRGCDRTDVPFPHHMIHALQSYSCLLESL-DAVNVNLDALQKIERFLVYPCIEKIVL---GRHHSPERLPPWKSLFMQSGFAPLTFSNFTESQADCLVQRT-PVKGFHVEKRQSSLALCWQRKELILATAWR 867 +F + P L+FA+FT NQA+LEA +H+ID + G QW +LMQ L LR GPPS ++T +PS + + EL + L A I + F ESE VN + + P + +L VK +KP +V +++ + F AL YS L +SL D V + E +L + + R E L W+ +GF P+ + QA L+ + G+ VE+ SL L WQ K LI A+AW+ Sbjct: 230 NFYDSCPYLKFAHFTANQAILEAVTTSRVVHVIDLGLNQGMQWPALMQALALRPGGPPSFRLTGVGNPSNREGIQELGW---KLAQLAQAIGVEFKFNGLTTERLSDLEPDMFETRTESETLVVNSVFELHPVLSQPGSIEKLLATVKAVKPGLVTVVEQEANHNGDVFLDRFNEALHYYSSLFDSLEDGVVIPSQDRVMSEVYLGRQILNLVATEGSDRIERHETLAQWRKRMGSAGFDPVNLGSDAFKQASLLLALSGGGDGYRVEENDGSLMLAWQTKPLIAASAWK 516
BLAST of CX078582 vs. ExPASy Swiss-Prot
Match: DWRF8_MAIZE (DELLA protein DWARF8 OS=Zea mays GN=D8 PE=1 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 1.146e-24 Identity = 88/306 (28.76%), Postives = 126/306 (41.18%), Query Frame = 1 Query: 25 FSEISPILQFANFTCNQALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVLRSEGPPSLKITAFASPSTHDELELSFTRENLKHFASEINMPF-----XXXXXXXXXXXXXXXXXXXRGLESEATAVN--LPIGTFCNYPATFPSVLCFVKQLKPKIVVSLDRGCDRTDVPFPHHMIHALQSYSCLLESLDAVNV----NLDALQKIERFLVYPCIEKIVLGRH-------------HSPERLPPWKSLFMQSGFAPLTFSNFTESQADCLVQR-TPVKGFHVEKRQSSLALCWQRKELILATAWR 867 F E P L+FA+FT NQA+LEAF GC R+H++DF I G QW +L+Q L LR GPPS ++T P + L L FA I + F E E AVN + P VL V+ ++P+IV +++ + F +L YS + +SL+ + DA + ++ LGR E L W+S SGFAP+ + QA L+ G+ VE++ L L W + LI +AWR Sbjct: 319 FYESCPYLKFAHFTANQAILEAFAGCRRVHVVDFGIKQGMQWPALLQALALRPGGPPSFRLTGVGPPQPDETDALQQVGWKLAQFAHTIRVDFQYRGLVAATLADLEPFMLQPEGDDTDDEPEVIAVNSVFELHRLLAQPGALEKVLGTVRAVRPRIVTVVEQEANHNSGTFLDRFTESLHYYSTMFDSLEGAGAGSGQSTDA-SPAAAGGTDQVMSEVYLGRQICNVVACEGAERTERHETLGQWRSRLGGSGFAPVHLGSNAYKQASTLLALFAGGDGYRVEEKDGCLTLGWHTRPLIATSAWR 623
BLAST of CX078582 vs. ExPASy Swiss-Prot
Match: RGL2_ARATH (DELLA protein RGL2 OS=Arabidopsis thaliana GN=RGL2 PE=1 SV=2) HSP 1 Score: 112.079 bits (279), Expect = 4.355e-24 Identity = 81/288 (28.12%), Postives = 120/288 (41.67%), Query Frame = 1 Query: 25 FSEISPILQFANFTCNQALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVLRSEGPPSLKITAFASPSTHDELELSFTRENLKHFASEINMPFXXXXXXXXXXXXXXXXXXXRGLESEATAVN--LPIGTFCNYPATFPSVLCFVKQLKPKIVVSLDRGCDRTDVPFPHHMIHALQSYSCLLESL-DAVNVNLDALQKIERFLVYPCIEKIVL---GRHHSPERLPPWKSLFMQSGFAPLTFSNFTESQADCLVQRTPV-KGFHVEKRQSSLALCWQRKELILATAWR 867 F E P L+FA+FT NQA+LEA R+H+ID + G QW +LMQ L LR GPPS ++T P T + L L FA + + F ESE VN + + +L VK +KP IV +++ + + F AL YS L +SL D+ ++ E +L + + R E W+ +GF P+ + QA L+ G+ VE+ L + WQ + LI +AW+ Sbjct: 258 FYESCPYLKFAHFTANQAILEAVTTARRVHVIDLGLNQGMQWPALMQALALRPGGPPSFRLTGIGPPQTENSDSLQQLGWKLAQFAQNMGVEFEFKGLAAESLSDLEPEMFETRPESETLVVNSVFELHRLLARSGSIEKLLNTVKAIKPSIVTVVEQEANHNGIVFLDRFNEALHYYSSLFDSLEDSYSLPSQDRVMSEVYLGRQILNVVAAEGSDRVERHETAAQWRIRMKSAGFDPIHLGSSAFKQASMLLSLYATGDGYRVEENDGCLMIGWQTRPLITTSAWK 545
BLAST of CX078582 vs. ExPASy Swiss-Prot
Match: SLR1_ORYSJ (DELLA protein SLR1 OS=Oryza sativa subsp. japonica GN=SLR1 PE=1 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.655e-23 Identity = 85/306 (27.78%), Postives = 127/306 (41.50%), Query Frame = 1 Query: 25 FSEISPILQFANFTCNQALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVLRSEGPPSLKITAFASPSTHDELELSFTRENLKHFASEINMPF------XXXXXXXXXXXXXXXXXXXRGLESEATAVN--LPIGTFCNYPATFPSVLCFVKQLKPKIVVSLDRGCDRTDVPFPHHMIHALQSYSCLLESLDAVNVNLDAL------------QKIERFLVYPCIEKIV----LGRHHSPERLPPWKSLFMQSGFAPLTFSNFTESQADCLVQR-TPVKGFHVEKRQSSLALCWQRKELILATAWR 867 F E P L+FA+FT NQA+LEAF GC+R+H++DF I G QW +L+Q L LR GPPS ++T P + L L FA I + F E E AVN + P VL V ++P+IV +++ + F +L YS + +SL+ + L Q + + I +V R E L W++ ++GF P+ + QA L+ G+ VE+++ L L W + LI +AWR Sbjct: 316 FYESCPYLKFAHFTANQAILEAFAGCHRVHVVDFGIKQGMQWPALLQALALRPGGPPSFRLTGVGPPQPDETDALQQVGWKLAQFAHTIRVDFQYRGLVAATLADLEPFMLQPEGEADANEEPEVIAVNSVFELHRLLAQPGALEKVLGTVHAVRPRIVTVVEQEANHNSGSFLDRFTESLHYYSTMFDSLEGGSSGQAELSPPAAGGGGGTDQVMSEVYLGRQICNVVACEGAERTERHETLGQWRNRLGRAGFEPVHLGSNAYKQASTLLALFAGGDGYRVEEKEGCLTLGWHTRPLIATSAWR 621
BLAST of CX078582 vs. ExPASy Swiss-Prot
Match: RGL1_ARATH (DELLA protein RGL1 OS=Arabidopsis thaliana GN=RGL1 PE=1 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.655e-23 Identity = 80/288 (27.78%), Postives = 127/288 (44.10%), Query Frame = 1 Query: 25 FSEISPILQFANFTCNQALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVLRSEGPPSLKITAFASPSTHDELELSFTRENLKHFASEI--NMPFXXXXXXXXXXXXXXXXXXXRGLESEATAVNLPIGTFCNYPATFPSVLCFVKQLKPKIVVSLDRGCDRTDVPFPHHMIHALQSYSCLLESLDAVNVNLDALQKI----ERFLVYPCIEKIVLGRHHSPERLPPWKSLFMQSGFAPLTFSNFTESQADCLVQ-RTPVKGFHVEKRQSSLALCWQRKELILATAWR 867 F E P L+FA+FT NQA+LE F ++H+ID + +G QW +L+Q L LR GPP ++T T D E+ + L AS I N F GLES A + +P + L +K ++P I+ +++ + F +L YS L +SL+ + ++ + + C + + RH E L W++ F GF P++ + QA L+ G++VE+ + L L WQ + LI +AWR Sbjct: 226 FYESCPYLKFAHFTANQAILEVFATAEKVHVIDLGLNHGLQWPALIQALALRPNGPPDFRLTGIGYSLT-DIQEVGW---KLGQLASTIGVNFEFKSIALNNLSDLKPEMLDIRPGLESVAVNSVFELHRLLAHPGSIDKFLSTIKSIRPDIMTVVEQEANHNGTVFLDRFTESLHYYSSLFDSLEGPPSQDRVMSELFLGRQILNLVACEGEDRVERH---ETLNQWRNRFGLGGFKPVSIGSNAYKQASMLLALYAGADGYNVEENEGCLLLGWQTRPLIATSAWR 506
BLAST of CX078582 vs. ExPASy Swiss-Prot
Match: RHT1_WHEAT (DELLA protein RHT-1 OS=Triticum aestivum GN=RHT1 PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 6.289e-23 Identity = 84/313 (26.84%), Postives = 126/313 (40.26%), Query Frame = 1 Query: 25 FSEISPILQFANFTCNQALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVLRSEGPPSLKITAFASPSTHDELELSFTRENLKHFASEINMPF------XXXXXXXXXXXXXXXXXXXRGLESEATAVN--LPIGTFCNYPATFPSVLCFVKQLKPKIVVSLDRGCDRTDVPFPHHMIHALQSYSCLLESLDAVNVNLDALQKIERFLVYPC-------IEKIVLGRH-------------HSPERLPPWKSLFMQSGFAPLTFSNFTESQADCLVQR-TPVKGFHVEKRQSSLALCWQRKELILATAWRC*G 876 F E P L+FA+FT NQA+LEAF GC R+H++DF I G QW +L+Q L LR GPPS ++T P + L L FA I + F E E AVN + P VL V+ ++P+IV +++ + F +L YS + +SL+ + + P + ++ LGR E L W++ +GF + + QA L+ G+ VE+++ L L W + LI +AWR G Sbjct: 310 FYESCPYLKFAHFTANQAILEAFAGCRRVHVVDFGIKQGMQWPALLQALALRPGGPPSFRLTGVGPPQPDETDALQQVGWKLAQFAHTIRVDFQYRGLVAATLADLEPFMLQPEGEEDPNEEPEVIAVNSVFEMHRLLAQPGALEKVLGTVRAVRPRIVTVVEQEANHNSGTFLDRFTESLHYYSTMFDSLEGGSSGGGPSEVSSGAAAAPAAAGTDQVMSEVYLGRQICNVVACEGAERTERHETLGQWRNRLGNAGFETVHLGSNAYKQASTLLALFAGGDGYKVEEKEGCLTLGWHTRPLIATSAWRLAG 622
BLAST of CX078582 vs. ExPASy Swiss-Prot
Match: GAI_GOSHI (DELLA protein GAI OS=Gossypium hirsutum GN=GAI PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 6.289e-23 Identity = 89/296 (30.07%), Postives = 124/296 (41.89%), Query Frame = 1 Query: 25 FSEISPILQFANFTCNQALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVLRSEGPPSLKITAFASPSTHDELELSFTRENLKHFASEINMPF-XXXXXXXXXXXXXXXXXXXRGLESEATAVN--LPIGTFCNYPATFPSVLCFVKQLKPKIVVSLDRGCDRTDVPFPHHMIHALQSYSCLLESLDAVNV--NLDALQKIERFL------VYPCIEKIVLGRHHSPERLPPWKSLFMQSGFAPLTFSNFTESQADCLVQR-TPVKGFHVEKRQSSLALCWQRKELI----LATAW 864 F E P L+FA+FT NQA+LEAF +R+H+IDF + G QW +LMQ L LR GPP+ ++T P + L L A I + F R E E AVN + P V+ +K +KPKIV +++ + F AL YS L +SL+ V L E +L V C + RH E L W++ +G +P+ + QA L+ G+ VE+ L L W + LI LAT W Sbjct: 244 FYETCPYLKFAHFTANQAILEAFSMASRVHVIDFGLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLAERIGIEFEFRGFVANSLADLEPEMLDIRPPEIEVVAVNAVFELHPLLARPGGIEKVVSSIKAMKPKIVTVVEQEANHNGPVFLDRFTEALHYYSTLFDSLEGSGVAPASQDLAMSELYLGRQICNVVACEGMDRVERH---EPLTQWRTRMETAGVSPVHLGSNAYKQASMLLALFASGDGYRVEENNGCLMLGWHTRPLIAHLGLATRW 536
BLAST of CX078582 vs. ExPASy Swiss-Prot
Match: SLN1_HORVU (DELLA protein SLN1 OS=Hordeum vulgare GN=SLN1 PE=1 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.401e-22 Identity = 83/309 (26.86%), Postives = 124/309 (40.13%), Query Frame = 1 Query: 25 FSEISPILQFANFTCNQALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVLRSEGPPSLKITAFASPSTHDELELSFTRENLKHFASEINMPF------XXXXXXXXXXXXXXXXXXXRGLESEATAVN--LPIGTFCNYPATFPSVLCFVKQLKPKIVVSLDRGCDRTDVPFPHHMIHALQSYSCLLESLDA------VNVNLDALQKIERFLVYPCIEKIVLGRH-------------HSPERLPPWKSLFMQSGFAPLTFSNFTESQADCLVQR-TPVKGFHVEKRQSSLALCWQRKELILATAWR 867 F E P L+FA+FT NQA+LEAF GC R+H++DF I G QW +L+Q L LR GPPS ++T P + L L FA I + F E E AVN + P VL V+ ++P+IV +++ + F +L YS + +SL+ V+ + ++ LGR E L W++ +GF + + QA L+ G+ VE+++ L L W + LI +AWR Sbjct: 306 FYESCPYLKFAHFTANQAILEAFAGCRRVHVVDFGIKQGMQWPALLQALALRPGGPPSFRLTGVGPPQPDETDALQQVGWKLAQFAHTIRVDFQYRGLVAATLADLEPFMLQPEGEEDPNEEPEVIAVNSVFEMHRLLAQPGALEKVLGTVRAVRPRIVTVVEQEANHNSGSFLDRFTESLHYYSTMFDSLEGGSSGGPSEVSSGGAAPAAAAGTDQVMSEVYLGRQICNVVACEGTERTERHETLGQWRNRLGNAGFETVHLGSNAYKQASTLLALFAGGDGYKVEEKEGCLTLGWHTRPLIATSAWR 614 The following BLAST results are available for this feature:
BLAST of CX078582 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 42
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX078582 ID=CX078582; Name=CX078582; organism=Citrus sinensis; type=EST; length=880bpback to top |