CX078582
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX078582 vs. ExPASy Swiss-Prot
Match: SCL13_ARATH (Scarecrow-like protein 13 OS=Arabidopsis thaliana GN=SCL13 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 7.705e-13 Identity = 63/193 (32.64%), Postives = 83/193 (43.01%), Query Frame = 1 Query: 31 EISPILQFANFTCNQALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVLRSEGPPSLKITAF-ASPSTHDE-LELSFTRENLKHFASEINMPFXXXXXXXXXXXXXXXXXXXRGLE-SEATAVNLPIGTFCNYPATFPSV-------LCFVKQLKPKIVVSLDRGCDRTDVPFPHHMIHALQSYSCLLESLDA 579 EI P +FA T N +LEA G R+HIIDF I G Q+ L+QEL GPP L++T S ST+ LS E L A +PF GLE A VN P + P SV L +K L PK+V +++ + PF + L Y+ + ES+DA Sbjct: 54 EICPYWKFAYTTANVEILEAIAGETRVHIIDFQIAQGSQYMFLIQELAKHPGGPPLLRVTGVDDSQSTYARGGGLSLVGERLATLAQSCGVPFEFHDAIMSGCKVQREHL---GLEPGFAVVVNFPY-VLHHMPDESVSVENHRDRLLHLIKSLSPKLVTLVEQESNTNTSPFLSRFVETLDYYTAMFESIDA 242
BLAST of CX078582 vs. ExPASy Swiss-Prot
Match: SCL30_ARATH (Scarecrow-like protein 30 OS=Arabidopsis thaliana GN=SCL30 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.228e-11 Identity = 68/300 (22.67%), Postives = 106/300 (35.33%), Query Frame = 1 Query: 7 ISAYKSFSEISPILQFANFTCNQALLEAFEGCNRIHIIDFDIGYGGQWASLMQELVLRSEGPPSLKITAFASPST--HDELELSFTRENLKHFASEINMPFXXXXXXXXXXXXXXXXXXXRGLESEATAVNLPIGTFCNYPATF------PSVLCFVKQLKPKIVVSLDRGCDRTDVPFPHHMIHALQSYSCLLESLDAVNVNLDALQK-IERFLVYPCIEKIVL----GRHHSPERLPPWKSLFMQSGFAPLTFSNFTESQADCLVQRTPVKGFHVEKRQSSLALCWQRKELILATAWR 867 + AYK F + P L FT N+ + E +HIIDF I YG QW L+Q L R GPP L++T P + + T LK F + N+PF E T VN + T + L + + P + V + F AL S L + + D + +ER L+ ++ R PE W+ +++GF P S +V+ K F ++ + W+ + L + W+ Sbjct: 282 LKAYKGFVQACPTLIMCYFTANRTINELASKATTLHIIDFGILYGFQWPCLIQALSKRDIGPPLLRVTGIELPQSGFRPSERVEETGRRLKRFCDKFNVPFEYSFIAKNWENITLDDLVIN--SGETTVVNCILRLQYTPDETVSLNSPRDTALKLFRDINPDLFVFAEINGTYNSPFFLTRFREALFHCSSLFDMYETTLSEDDNCRTLVERELIIRDAMSVIACEGSERFARPETYKQWQVRILRAGFRPAKLSKQIVKDGKEIVKERYHKDFVIDNDNHWMFQGWKGRVLYAVSCWK 579 The following BLAST results are available for this feature:
BLAST of CX078582 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 42
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX078582 ID=CX078582; Name=CX078582; organism=Citrus sinensis; type=EST; length=880bpback to top |