CX078580
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX078580 vs. ExPASy Swiss-Prot
Match: VDLC_HELPY (Probable short-chain type dehydrogenase/reductase vdlC OS=Helicobacter pylori GN=vdlC PE=3 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 3.926e-17 Identity = 61/202 (30.20%), Postives = 103/202 (50.99%), Query Frame = -2 Query: 289 DESVSSAVKTIMSKIGR----IDILVNNAGIASAGPLAELPLDAIRKAWEINTLGQLRLVQNVVPYMASRRSGSIVNVASVVGKVPTPWAGSYCASKAAVLAMSDTLRVELRPFGIDVVKVLPGAVRSNFGSN--SMEGLRNHDWKLYKEFKEAIAERARASQGGKSTDATLFARHVAKKVLSPRPPKQIAFGHMTGLFAML 876 D S S+A+K + S I D+L+N+AG G + + P++ ++K + +N +VQ +P + ++ I N++S+ G+V + G Y ASK A+ A SD LR+EL+PF + V + PG V+SN+ S+E + D LY A+ A S L + VA+K++ ++I ++ GL L Sbjct: 61 DVSDSNALKEVFSNISAKEKYCDVLINSAGYGVFGSVEDTPIEEVKKQFSVNFFALCEVVQFCLPLLKNKPHSKIFNLSSIAGRVSMLFLGHYSASKHALEAYSDALRLELKPFNVQVCLIEPGPVKSNWEKTAFSVENFESED-SLY-----ALEVNAAKSFYSGVYQNALSPKAVAQKIVFLSMSQKIKARYLIGLKTQL 256
BLAST of CX078580 vs. ExPASy Swiss-Prot
Match: VDLC_HELPJ (Probable short-chain type dehydrogenase/reductase vdlC OS=Helicobacter pylori J99 GN=vdlC PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.926e-17 Identity = 60/200 (30.00%), Postives = 101/200 (50.50%), Query Frame = -2 Query: 289 DESVSSAVK----TIMSKIGRIDILVNNAGIASAGPLAELPLDAIRKAWEINTLGQLRLVQNVVPYMASRRSGSIVNVASVVGKVPTPWAGSYCASKAAVLAMSDTLRVELRPFGIDVVKVLPGAVRSNFGSNSMEGLRNHDWKLYKEFKEAIAERARASQGGKSTDATLFARHVAKKVLSPRPPKQIAFGHMTGLFAML 876 D S S+A+K I +K D+L+N+AG G + + P++ ++K + +N +VQ +P + ++ I N++S+ G+V + G Y ASK A+ A SD LR+EL+PF + V + PG V+SN+ + E D +Y A+ A S L A+ VA+K++ +I ++ GL L Sbjct: 50 DVSDSNALKEVFLNISAKEDHCDVLINSAGYGVFGSVEDTPIEEVKKQFSVNFFALCEVVQLCLPLLKNKPYSKIFNLSSIAGRVSMLFLGHYSASKHALEAYSDALRLELKPFNVQVCLIEPGPVKSNWEKTAFENDERKD-SVY-----ALEVNAAKSFYSGVYQKALNAKEVAQKIVFLSMSHKIKARYLIGLKTQL 243
BLAST of CX078580 vs. ExPASy Swiss-Prot
Match: YUSZ_BACSU (Uncharacterized oxidoreductase yusZ OS=Bacillus subtilis GN=yusZ PE=3 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 5.127e-17 Identity = 45/131 (34.35%), Postives = 77/131 (58.78%), Query Frame = -2 Query: 484 DESVSSAVKTIMSKIGRIDILVNNAGIASAGPLAELPLDAIRKAWEINTLGQLRLVQNVVPYMASRRSGSIVNVASVVGKVPTPWAGSYCASKAAVLAMSDTLRVELRPFGIDVVKVLPGAVRSNFGSNSM 876 ++S+ S K + S ID+LVNNAG A G + ++P++ R+ +E N G + + + V+PY+ I+NV+S+ G P Y +SK A+ S++LR+EL PFGI+ + PG+ +++ S S+ Sbjct: 65 EQSIVSFGKAV-SAYAPIDLLVNNAGTAYGGFIEDVPMEHFRQQFETNVFGVIHVTKTVLPYIRKHGGAKIINVSSISGLTGFPALSPYVSSKHALEGFSESLRIELLPFGIETALIEPGSYKTSIWSTSL 194
BLAST of CX078580 vs. ExPASy Swiss-Prot
Match: DRS7C_XENTR (Dehydrogenase/reductase SDR family member 7C OS=Xenopus tropicalis GN=dhrs7c PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.492e-16 Identity = 44/116 (37.93%), Postives = 67/116 (57.76%), Query Frame = -2 Query: 505 KTIMSKIGRIDILVNNAGIASAGPLAELPLDAIRKAWEINTLGQLRLVQNVVPYMASRRSGSIVNVASVVGKVPTPWAGSYCASKAAVLAMSDTLRVELRPFGIDVVKVLPGAVRS 852 K I G +D+L+NNA + GPL + L+ +K + N G + LV+ ++P+M SRR+G IV V ++ GK+ P+ +Y ASK A+ D LR E+ F + V V P +RS Sbjct: 111 KEIQDCYGCVDVLINNASMKMKGPLQSVSLELDKKIMDANYFGPITLVKAILPHMISRRTGQIVLVNTIQGKIGVPFRAAYAASKHAIQGFFDCLRAEVEEFDVSVSTVSPTFIRS 226
BLAST of CX078580 vs. ExPASy Swiss-Prot
Match: RDH8_BOVIN (Retinol dehydrogenase 8 OS=Bos taurus GN=RDH8 PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.545e-16 Identity = 67/213 (31.46%), Postives = 103/213 (48.36%), Query Frame = -2 Query: 265 DESVSSAVKTIMSKIGRIDILVNNAGIASAGPLAELPLDAIRKAWEINTLGQLRLVQNVVPYMASRRSGSIVNVASVVGKVPTPWAGSYCASKAAVLAMSDTLRVELRPFGIDVVKVLPGAVRSNFGSNSMEGLRNHDW-----KLYKEFKEAIAERARASQGGKSTDATLFARHVAKKVLSPRPP-KQIAFGHMTGLFAMLSWSP---LWVR 876 DESV+ + I G +D+LVNNAG+ GPL L L A++ ++ N G +RLV+ V+P M RR G IV V+SV+G + Y ASK A+ ++L V+L F I + V PG V + F +E + ++ F++ +R A+ + K + S RPP ++ T L A+ + P L+VR Sbjct: 70 DESVAQCLNCIQG--GEVDVLVNNAGVGLVGPLEGLSLAAMQNVFDTNFFGAVRLVKAVLPSMKRRRQGHIVVVSSVMGLQGVVFNEVYAASKFAMEGFFESLAVQLLQFNIFISLVEPGPVVTEFEGKLLEQVSTAEFPGTDPDTLSYFRDLYLPASRELFHNVGQSPQDVAKVIVKVIGSARPPLRRRTNTRYTPLIALKAMDPSGSLYVR 280
BLAST of CX078580 vs. ExPASy Swiss-Prot
Match: FABG_THEMA (3-oxoacyl-[acyl-carrier-protein] reductase OS=Thermotoga maritima GN=fabG PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 3.324e-16 Identity = 49/123 (39.84%), Postives = 67/123 (54.47%), Query Frame = -2 Query: 505 ESVSSAVKTIMSKIGRIDILVNNAGIASAGPLAELPLDAIRKAWEINTLGQLRLVQNVVPYMASRRSGSIVNVASVVGKVPTPWAGSYCASKAAVLAMSDTLRVELRPFGIDVVKVLPGAVRS 873 + + V+ ++ K GRID+LVNNAGI L + + +N G + Q VVPYM +R+GSIVNV+SVVG P +Y ASKA V+ M+ T EL I V V PG + + Sbjct: 67 DQIKEVVEKVVQKYGRIDVLVNNAGITRDALLVRMKEEDWDAVINVNLKGVFNVTQMVVPYMIKQRNGSIVNVSSVVGIYGNPGQTNYAASKAGVIGMTKTWAKELAGRNIRVNAVAPGFIET 189
BLAST of CX078580 vs. ExPASy Swiss-Prot
Match: YAEB_SCHPO (Uncharacterized oxidoreductase C23D3.11 OS=Schizosaccharomyces pombe GN=SPAC23D3.11 PE=2 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 1.263e-15 Identity = 43/116 (37.07%), Postives = 68/116 (58.62%), Query Frame = -2 Query: 484 GRIDILVNNAGIASAGPLAELPLDAIRKAWEINTLGQLRLVQNVVPYMASRRSGSIVNVASVVGKVPTPWAGSYCASKAAVLAMSDTLRVELRPFGIDVVKVLPGAVRSNFGSNSM 831 G + L+NNAG + P +L ++ + K ++N G +R+ + R G+IVNV S+V VP + +Y ASKAA+LA S+TLR+EL PFG+ V ++ G V++ S + Sbjct: 76 GSLHYLINNAGAPCSAPAIDLDIEDVSKVMDVNFYGVIRM-NKAFQHQLIRAKGTIVNVNSLVSYVPFAFNAAYNASKAALLAYSNTLRIELAPFGVQVTSIMTGGVQTKIQSKPL 190
BLAST of CX078580 vs. ExPASy Swiss-Prot
Match: RDH8_HUMAN (Retinol dehydrogenase 8 OS=Homo sapiens GN=RDH8 PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.649e-15 Identity = 65/213 (30.52%), Postives = 100/213 (46.95%), Query Frame = -2 Query: 265 DESVSSAVKTIMSKIGRIDILVNNAGIASAGPLAELPLDAIRKAWEINTLGQLRLVQNVVPYMASRRSGSIVNVASVVGKVPTPWAGSYCASKAAVLAMSDTLRVELRPFGIDVVKVLPGAVRSNFGSN-----SMEGLRNHDWKLYKEFKEAIAERARASQGGKSTDATLFARHVAKKVLSPRPP----KQIAFGHMTGLFAMLSWSPLWVR 876 DESV+ + I G +D+LVNNAG+ GPL L L A++ ++ N G +RLV+ V+P M RR G IV ++SV+G + Y ASK A+ ++L ++L F I + V PG V + F SM D + F++ +R + + + + S RPP I + +T L + S L+VR Sbjct: 70 DESVAQCLSCIQ---GEVDVLVNNAGMGLVGPLEGLSLAAMQNVFDTNFFGAVRLVKAVLPGMKRRRQGHIVVISSVMGLQGVIFNDVYAASKFALEGFFESLAIQLLQFNIFISLVEPGPVVTEFEGKLLAQVSMAEFPGTDPETLHYFRDLYLPASRKLFCSVGQNPQDVVQAIVNVISSTRPPLRRQTNIRYSPLTTLKTVDSSGSLYVR 279
BLAST of CX078580 vs. ExPASy Swiss-Prot
Match: AYR1_YEAST (NADPH-dependent 1-acyldihydroxyacetone phosphate reductase OS=Saccharomyces cerevisiae GN=AYR1 PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.675e-15 Identity = 50/202 (24.75%), Postives = 97/202 (48.02%), Query Frame = -2 Query: 229 GRIDILVNNAGIASAGPLAELPLDAIRKAWEINTLGQLRLVQNVVPYMASRRSGSIVNVASVVGKVPTPWAGSYCASKAAVLAMSDTLRVELRPFGIDVVKVLPGAVRSNFGSNSMEGLRNHDWKLYKEFKEAIAERARASQGGKSTDATLFARHVAKKVLSPRPPKQIAFGHMTGLFA-MLSWSPLWVRDLFFSTRFSLNK 831 G++D+L NNAG + P + A+ + +++N G + + + + ++ + G+IV S+ G V P+ Y ASKAA+ + L +E++PF + V+ + G V ++ L + E +EA R ++ K A +A+ + K +LS P + G + ++ + P W+ + S +F L+K Sbjct: 85 GKLDLLYNNAGQSCTFPALDATDAAVEQCFKVNVFGHINMCRELSEFLIKAK-GTIVFTGSLAGVVSFPFGSIYSASKAAIHQYARGLHLEMKPFNVRVINAITGGVATDIADK--RPLPETSIYNFPEGREAFNSRKTMAKDNKPMPADAYAKQLVKDILSTSDPVDVYRGTFANIMRFVMIFVPYWLLEKGLSKKFKLDK 283
BLAST of CX078580 vs. ExPASy Swiss-Prot
Match: FABG_STAES (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=fabG PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 6.268e-15 Identity = 49/162 (30.25%), Postives = 79/162 (48.77%), Query Frame = -2 Query: 388 ESVSSAVKTIMSKIGRIDILVNNAGIASAGPLAELPLDAIRKAWEINTLGQLRLVQNVVPYMASRRSGSIVNVASVVGKVPTPWAGSYCASKAAVLAMSDTLRVELRPFGIDVVKVLPGAVRSNFGSNSMEGLRNHDWKLYKEFKEAIAERARASQGGKSTD 873 + V +K ++S+ G +D+LVNNAGI L + + N G +Q V P M +RSG+I+N+ S+VG + P +Y A+KA V+ ++ T EL GI V V PG + S+ + L + K+ + E+ + G+ TD Sbjct: 65 DEVKEMIKEVVSQFGSVDVLVNNAGITKDNLLMRMKEQEWDDVIDTNLKGVFNCIQKVTPQMLRQRSGAIINLTSIVGAMGNPGQANYVATKAGVIGLTKTAARELASRGITVNAVAPGFIVSDMTN-----------ALSDDLKDQMLEQIPLKRFGEDTD 215 The following BLAST results are available for this feature:
BLAST of CX078580 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 128
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Sequences
The
following sequences are available for this feature:
EST sequence >CX078580 ID=CX078580; Name=CX078580; organism=Citrus sinensis; type=EST; length=877bpback to top |