CX078580

Overview
NameCX078580
Unique NameCX078580
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length877
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX078580 vs. ExPASy Swiss-Prot
Match: DHB11_RAT (Estradiol 17-beta-dehydrogenase 11 OS=Rattus norvegicus GN=Hsd17b11 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.171e-11
Identity = 41/136 (30.15%), Postives = 61/136 (44.85%), Query Frame = -2
Query:  475 ESVSSAVKTIMSKIGRIDILVNNAGIASAGPLAELPLDAIRKAWEINTLGQLRLVQNVVPYMASRRSGSIVNVASVVGKVPTPWAGSYCASKAAVLAMSDTLRVELRPFGIDVVK---VLPGAVRSNFGSNSMEGL 873
            E + SAV+ +  ++G + ILVNNAG+     L       I K +E+N L      +  +P M     G +V VAS  G    P+  +YC+SK A +     L  EL   G   V+   + P  + + F  N    L
Sbjct:   98 EEIYSAVRKVKEEVGDVSILVNNAGVVYTADLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMMKNNHGHVVTVASAAGHTVVPFLLAYCSSKFAAVGFHRALTDELAALGCTGVRTSCLCPNFINTGFIKNPSTNL 233          
BLAST of CX078580 vs. ExPASy Swiss-Prot
Match: BUDC_KLEPN (Acetoin(diacetyl) reductase OS=Klebsiella pneumoniae GN=budC PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 7.171e-11
Identity = 39/124 (31.45%), Postives = 62/124 (50.00%), Query Frame = -2
Query:  505 ESVSSAVKTIMSKIGRIDILVNNAGIASAGPLAELPLDAIRKAWEINTLGQLRLVQNVV-PYMASRRSGSIVNVASVVGKVPTPWAGSYCASKAAVLAMSDTLRVELRPFGIDVVKVLPGAVRS 873
            + V +AV+     +G  D++VNNAG+A + P+  +  + + K + IN  G +  +Q  V  +      G I+N  S  G V  P    Y +SK AV  ++ T   +L P GI V    PG V++
Sbjct:   64 DQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKT 187          
BLAST of CX078580 vs. ExPASy Swiss-Prot
Match: ACT3_STRCO (Putative ketoacyl reductase OS=Streptomyces coelicolor GN=actIII PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.171e-11
Identity = 45/131 (34.35%), Postives = 64/131 (48.85%), Query Frame = -2
Query:  481 VSSAVKTIMSKIGRIDILVNNAGIASAGPLAELPLDAIRKAWEINTLGQLRLVQNVVPY--MASRRSGSIVNVASVVGKVPTPWAGSYCASKAAVLAMSDTLRVELRPFGIDVVKVLPGAVRSNFGSNSME 867
            + + V  ++ + G +D+LVNNAG    G  AEL  +      E N  G  R+ + V+    M  R +G IVN+AS  GK     A  Y ASK  V+  +  L +EL   GI V  V PG V +   ++  E
Sbjct:   70 IEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVRE 200          
BLAST of CX078580 vs. ExPASy Swiss-Prot
Match: Y2403_STAAW (Uncharacterized oxidoreductase MW2403 OS=Staphylococcus aureus (strain MW2) GN=MW2403 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.366e-11
Identity = 38/121 (31.40%), Postives = 61/121 (50.41%), Query Frame = -2
Query:  511 ESVSSAVKTIMSKIGRIDILVNNAGIASAGPLAELPLDAIRKAWEINTLGQLRLVQNVVPYMASRRSGSIVNVASVVGKVPTPWAGSYCASKAAVLAMSDTLRVELRPFGIDVVKVLPGAV 873
            E V   +K      G +DI++N+AG   +  + +  +D      ++N  G L  VQ  +P M  + SG ++N+AS+ G   T  +  Y A+KAAV  ++  L  EL   G+ V  + PG V
Sbjct:   66 EEVDELIKIAQQTFGGLDIVINSAGQMLSSKITDYQVDEWDSMIDVNIKGTLYTVQAALPTMLEQSSGHLINIASISGFEVTKSSTIYSATKAAVHTITQGLEKELAKTGVKVTSISPGMV 186          
BLAST of CX078580 vs. ExPASy Swiss-Prot
Match: Y2370_STAAS (Uncharacterized oxidoreductase SAS2370 OS=Staphylococcus aureus (strain MSSA476) GN=SAS2370 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.366e-11
Identity = 38/121 (31.40%), Postives = 61/121 (50.41%), Query Frame = -2
Query:  511 ESVSSAVKTIMSKIGRIDILVNNAGIASAGPLAELPLDAIRKAWEINTLGQLRLVQNVVPYMASRRSGSIVNVASVVGKVPTPWAGSYCASKAAVLAMSDTLRVELRPFGIDVVKVLPGAV 873
            E V   +K      G +DI++N+AG   +  + +  +D      ++N  G L  VQ  +P M  + SG ++N+AS+ G   T  +  Y A+KAAV  ++  L  EL   G+ V  + PG V
Sbjct:   66 EEVDELIKIAQQTFGGLDIVINSAGQMLSSKITDYQVDEWDSMIDVNIKGTLYTVQAALPTMLEQSSGHLINIASISGFEVTKSSTIYSATKAAVHTITQGLEKELAKTGVKVTSISPGMV 186          
BLAST of CX078580 vs. ExPASy Swiss-Prot
Match: DHB11_MOUSE (Estradiol 17-beta-dehydrogenase 11 OS=Mus musculus GN=Hsd17b11 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.366e-11
Identity = 42/136 (30.88%), Postives = 60/136 (44.12%), Query Frame = -2
Query:  475 ESVSSAVKTIMSKIGRIDILVNNAGIASAGPLAELPLDAIRKAWEINTLGQLRLVQNVVPYMASRRSGSIVNVASVVGKVPTPWAGSYCASKAAVLAMSDTLRVELRPFGIDVVK---VLPGAVRSNFGSNSMEGL 873
            E + SA K +  ++G + ILVNNAG+     L       I K +E+N L      +  +P M     G IV VAS  G    P+  +YC+SK A +     L  EL   G   V+   + P  + + F  N    L
Sbjct:   98 EEIYSAAKKVKEEVGDVSILVNNAGVVYTADLFATQDPQIEKTFEVNVLAHFWTTKAFLPVMMKNNHGHIVTVASAAGHTVVPFLLAYCSSKFAAVGFHRALTDELAALGRTGVRTSCLCPNFINTGFIKNPSTNL 233          
BLAST of CX078580 vs. ExPASy Swiss-Prot
Match: DHB11_MACFA (Estradiol 17-beta-dehydrogenase 11 OS=Macaca fascicularis GN=HSD17B11 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.366e-11
Identity = 42/136 (30.88%), Postives = 62/136 (45.59%), Query Frame = -2
Query:  475 ESVSSAVKTIMSKIGRIDILVNNAGIASAGPLAELPLDAIRKAWEINTLGQLRLVQNVVPYMASRRSGSIVNVASVVGKVPTPWAGSYCASKAAVLAMSDTLRVELRPFGIDVVK---VLPGAVRSNFGSNSMEGL 873
            E + S+ K + ++IG + ILVNNAG+     L       I K +E+N L      +  +P M     G +V VAS  G +  P+  +YC+SK + +     L  EL    I  VK   + P  V + F  N    L
Sbjct:   98 EDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDAQIEKTFEVNILAHFWTTKAFLPAMMKNNHGHVVTVASAAGHISVPFLLAYCSSKFSAVGFHKALTDELAALQITGVKTTCLCPNFVNTGFIKNPSTSL 233          
BLAST of CX078580 vs. ExPASy Swiss-Prot
Match: BDHA_RHIME (D-beta-hydroxybutyrate dehydrogenase OS=Rhizobium meliloti GN=bdhA PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.366e-11
Identity = 31/119 (26.05%), Postives = 62/119 (52.10%), Query Frame = -2
Query:  511 VSSAVKTIMSKIGRIDILVNNAGIASAGPLAELPLDAIRKAWEINTLGQLRLVQNVVPYMASRRSGSIVNVASVVGKVPTPWAGSYCASKAAVLAMSDTLRVELRPFGIDVVKVLPGAV 867
            ++  +  +  + G  DILVNNAG+     + + P++   +   +N       ++  +P M  +  G I+N+AS  G V +P+  +Y A+K  ++ ++ T+ +E+   G+ V  + PG V
Sbjct:   68 IADMMAMVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVASPFKSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYV 186          
The following BLAST results are available for this feature:
BLAST of CX078580 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 128
Match NameE-valueIdentityDescription
DHB11_RAT7.171e-1130.15Estradiol 17-beta-dehydrogenase 11 OS=Rattus norve... [more]
BUDC_KLEPN7.171e-1131.45Acetoin(diacetyl) reductase OS=Klebsiella pneumoni... [more]
ACT3_STRCO7.171e-1134.35Putative ketoacyl reductase OS=Streptomyces coelic... [more]
Y2403_STAAW9.366e-1131.40Uncharacterized oxidoreductase MW2403 OS=Staphyloc... [more]
Y2370_STAAS9.366e-1131.40Uncharacterized oxidoreductase SAS2370 OS=Staphylo... [more]
DHB11_MOUSE9.366e-1130.88Estradiol 17-beta-dehydrogenase 11 OS=Mus musculus... [more]
DHB11_MACFA9.366e-1130.88Estradiol 17-beta-dehydrogenase 11 OS=Macaca fasci... [more]
BDHA_RHIME9.366e-1126.05D-beta-hydroxybutyrate dehydrogenase OS=Rhizobium ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_9H09_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-9H09-O17-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX078580 ID=CX078580; Name=CX078580; organism=Citrus sinensis; type=EST; length=877bp
CAAAGTAATTTTATAAAAATTTAATAAAAACTCTTATTGACAACTAAACA
ACTAAATTTTTTTATGTAAAAGCTCTATCATCAAAAGATTTACTTAAATA
AGCTCTATTTAAAGCTGTACCAAATAGAGCCTAAATCTAATGGCGTCAAA
TTTATGAAGTACATGTGAACATTCTTCTAATTATTTATAAAATAGTAAAT
GGCAAACAGCCCCAAATCTTTAGACCTCCTTGTTTAGACTAAAACGAGTC
GAAAAGAACAAATCTCTCACCCAAAGTGGAGACCAAGAAAGCATAGCAAA
TAAACCAGTCATGTGACCGAATGCAATTTGCTTTGGTGGTCTGGGACTCA
AAACTTTCTTCGCCACATGCCTTGCGAACAAAGTAGCATCAGTTGATTTA
CCACCCTGAGAAGCCCTAGCTCGCTCGGCAATAGCCTCTTTGAATTCCTT
GTAGAGTTTCCAATCATGATTCCTCAAACCTTCCATGCTATTACTGCCAA
AATTTGATCTTACAGCACCAGGGAGTACTTTCACTACATCAATACCAAAA
GGCCTTAATTCAACGCGCAAAGTATCGGACATGGCAAGCACTGCAGCCTT
GCTAGCACAATAAGACCCTGCCCACGGTGTTGGCACTTTTCCTACAACAC
TTGCTACATTTACGATGCTCCCACTGCGCCTTGAAGCCATGTATGGAACA
ACATTTTGCACCAACCTTAATTGCCCTAATGTGTTAATTTCCCAAGCTTT
CCTTATAGCGTCTAGTGGAAGCTCGGCTAGAGGGCCGGCACTTGCTATAC
CAGCATTGTTGACCAGAATGTCTATACGGCCAATTTTTGACATGATTGTT
TTCACTGCTGATGATACACTTTCATCT
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