CX078580

Overview
NameCX078580
Unique NameCX078580
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length877
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX078580 vs. ExPASy Swiss-Prot
Match: FABG_STAEQ (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=fabG PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.268e-15
Identity = 49/162 (30.25%), Postives = 79/162 (48.77%), Query Frame = -2
Query:  388 ESVSSAVKTIMSKIGRIDILVNNAGIASAGPLAELPLDAIRKAWEINTLGQLRLVQNVVPYMASRRSGSIVNVASVVGKVPTPWAGSYCASKAAVLAMSDTLRVELRPFGIDVVKVLPGAVRSNFGSNSMEGLRNHDWKLYKEFKEAIAERARASQGGKSTD 873
            + V   +K ++S+ G +D+LVNNAGI     L  +         + N  G    +Q V P M  +RSG+I+N+ S+VG +  P   +Y A+KA V+ ++ T   EL   GI V  V PG + S+  +            L  + K+ + E+    + G+ TD
Sbjct:   65 DEVKEMIKEVVSQFGSVDVLVNNAGITKDNLLMRMKEQEWDDVIDTNLKGVFNCIQKVTPQMLRQRSGAIINLTSIVGAMGNPGQANYVATKAGVIGLTKTAARELASRGITVNAVAPGFIVSDMTN-----------ALSDDLKDQMLEQIPLKRFGEDTD 215          
BLAST of CX078580 vs. ExPASy Swiss-Prot
Match: DHRS7_MOUSE (Dehydrogenase/reductase SDR family member 7 OS=Mus musculus GN=Dhrs7 PE=2 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 6.268e-15
Identity = 49/147 (33.33%), Postives = 77/147 (52.38%), Query Frame = -2
Query:  448 SVSSAVKTIMSKIGRIDILVNNAGIASAGPLAELPLDAIRKAWEINTLGQLRLVQNVVPYMASRRSGSIVNVASVVGKVPTPWAGSYCASKAAVLAMSDTLRVELRPF-GIDVVKVLPGAVRSNFGSNSM-----EGLRNHDWKLYK 870
            S  +A K ++ + G+IDILVNN G +    + E  LD  ++   +N +G + L + V+P+M  R+ G IV V S+ G      +  YCASK A+    + L  EL  + GI    V PG V+S+   N+      + +RN+  + YK
Sbjct:  117 SHEAATKAVLQEFGKIDILVNNGGRSQRSLVLETNLDVFKELINLNYIGTVSLTKCVLPHMIERKQGKIVTVNSIAGIASVSLSSGYCASKHALRGFFNALHSELGQYPGITFCNVYPGPVQSDIVKNAFTEEVTKSMRNNIDQSYK 263          
BLAST of CX078580 vs. ExPASy Swiss-Prot
Match: DHRS7_ANOGA (Dehydrogenase/reductase SDR family protein 7-like OS=Anopheles gambiae GN=AGAP005532 PE=3 SV=3)

HSP 1 Score: 81.6481 bits (200), Expect = 6.268e-15
Identity = 53/180 (29.44%), Postives = 86/180 (47.78%), Query Frame = -2
Query:  331 SVSSAVKTIMSKIGRIDILVNNAGIASAGPLAELPLDAIRKAWEINTLGQLRLVQNVVPYMASRRSGSIVNVASVVGKVPTPWAGSYCASKAAVLAMSDTLRVELRPFGIDVVKVLPGAVRSNFGSNSMEGLRNHDWKLYKEFKEAIAERARASQGGKSTDATLFARHVAKKVLSPRPPK 870
            S+   V++++   G IDILVNN GI+  G      +D   +   +N  G + L +  +P M +R+ G IV+++SV GK   P   +Y ASK A+ A  D+LR E+    I V  + PG + +    N++ G      K+     +A      + Q   S+     AR     +L+P  P+
Sbjct:  116 SIGGKVQSVLEIHGAIDILVNNGGISVRGDALSTAIDVDIRIMLVNYFGSVALTKACLPSMMARKEGRIVSISSVQGKFAIPHRSAYSASKHAMQAFCDSLRAEVAKDNIKVTLISPGYINTALSLNALTGTGASYGKM-----DAATAGGASPQDTASSILKAIARDEKDVMLAPIAPR 290          
BLAST of CX078580 vs. ExPASy Swiss-Prot
Match: YOXD_BACSU (Uncharacterized oxidoreductase yoxD OS=Bacillus subtilis GN=yoxD PE=3 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 8.186e-15
Identity = 42/124 (33.87%), Postives = 70/124 (56.45%), Query Frame = -2
Query:  502 ESVSSAVKTIMSKIGRIDILVNNAGIASAGPLAELPLDAIRKAWEINTLGQLRLVQNVVPYMASRRSGSIVNVASVVGKVPTPWAGSYCASKAAVLAMSDTLRVELRPFGIDVVKVLPGAVRSN 873
            + V+ AV  +  ++G IDIL+NNAGI+  G   +L  D      ++N +G   + + V+P M  R++G I+N++S  G+       +Y ASK AVL ++++L  E+R   I V  + P  V S+
Sbjct:   68 DQVNQAVAQVKEQLGDIDILINNAGISKFGGFLDLSADEWENIIQVNLMGVYHVTRAVLPEMIERKAGDIINISSTAGQRGAAVTSAYSASKFAVLGLTESLMQEVRKHNIRVSALTPSTVASD 191          
BLAST of CX078580 vs. ExPASy Swiss-Prot
Match: DHRS7_DROME (Dehydrogenase/reductase SDR family protein 7-like OS=Drosophila melanogaster GN=CG7601 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.069e-14
Identity = 44/131 (33.59%), Postives = 71/131 (54.20%), Query Frame = -2
Query:  478 SVSSAVKTIMSKIGRIDILVNNAGIASAGPLAELPLDAIRKAWEINTLGQLRLVQNVVPYMASRRSGSIVNVASVVGKVPTPWAGSYCASKAAVLAMSDTLRVELRPFGIDVVKVLPGAVRSNFGSNSMEG 870
            S+   V  +++   ++DIL+NN GI+    +A   +D   K   +N  G + L + ++P M  R SG I  ++SV GK   P   +Y ASK A+ A +D+LR E+    I+V  V PG +R+    N++ G
Sbjct:  120 SIPEFVTRVLAVYNQVDILINNGGISVRADVASTAVDVDLKVMVVNYFGSVALTKALLPSMVKRGSGHICFISSVQGKFAIPQRAAYSASKHAMQAFADSLRAEVANKNINVSCVSPGYIRTQLSLNALTG 250          
BLAST of CX078580 vs. ExPASy Swiss-Prot
Match: DRS7C_BOVIN (Dehydrogenase/reductase SDR family member 7C OS=Bos taurus GN=DHRS7C PE=2 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.396e-14
Identity = 45/139 (32.37%), Postives = 70/139 (50.36%), Query Frame = -2
Query:  451 VSSAVKTIMSKIGRIDILVNNAGIASAGPLAELPLDAIRKAWEINTLGQLRLVQNVVPYMASRRSGSIVNVASVVGKVPTPWAGSYCASKAAVLAMSDTLRVELRPFGIDVVKVLPGAVRSNFGSNSMEGLRNHDWKLY 867
            V    K ++   G +DIL+NNA +   GP  ++ L+  +K  + N  G + L + ++P M SRR+G IV V ++ GK+  P+  +Y ASK A L   D LR E+  + + V  V P  +RS              WK +
Sbjct:  106 VQDVAKEVLDCYGCVDILINNASVKVKGPAHKISLELDKKIMDANYFGPIILTKALLPDMISRRTGQIVLVNNIQGKLGIPFRTAYAASKHAALGFFDCLRAEVEEYDVVVSTVSPTFIRSYHVDPGQGNWEASIWKFF 244          
BLAST of CX078580 vs. ExPASy Swiss-Prot
Match: YM71_YEAST (Uncharacterized oxidoreductase YMR226C OS=Saccharomyces cerevisiae GN=YMR226C PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.824e-14
Identity = 47/151 (31.13%), Postives = 77/151 (50.99%), Query Frame = -2
Query:  424 ESVSSAVKTIMSKIGRIDILVNNAGIA-SAGPLAELPLDAIRKAWEINTLGQLRLVQNVVPYMASRRSGSIVNVASVVGKVPTPWAGSYCASKAAVLAMSDTLRVELRPFGIDVVKVLPGAVRSNFGSNSMEGLRNHDWKLYKEFKEAIAE 873
            E +   ++ +  +   IDILVNNAG A  +  + ++  + I+  ++ N    + + Q V+P   ++ SG IVN+ S+ G+   P    YCASK AV A +D+LR EL    I V+ + PG V + F      G       +YK+    +A+
Sbjct:   80 EKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGNEEQAKNVYKDTTPLMAD 230          
BLAST of CX078580 vs. ExPASy Swiss-Prot
Match: FABG_STAAW (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain MW2) GN=fabG PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.824e-14
Identity = 50/162 (30.86%), Postives = 79/162 (48.77%), Query Frame = -2
Query:  388 ESVSSAVKTIMSKIGRIDILVNNAGIASAGPLAELPLDAIRKAWEINTLGQLRLVQNVVPYMASRRSGSIVNVASVVGKVPTPWAGSYCASKAAVLAMSDTLRVELRPFGIDVVKVLPGAVRSNFGSNSMEGLRNHDWKLYKEFKEAIAERARASQGGKSTD 873
            + V + +K ++S+ G +D+LVNNAGI     L  +         + N  G    +Q   P M  +RSG+I+N++SVVG V  P   +Y A+KA V+ ++ +   EL   GI V  V PG + S+               L  E KE +  +   ++ G+ TD
Sbjct:   67 DEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTD-----------ALSDELKEQMLTQIPLARFGQDTD 217          
BLAST of CX078580 vs. ExPASy Swiss-Prot
Match: FABG_STAAS (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain MSSA476) GN=fabG PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.824e-14
Identity = 50/162 (30.86%), Postives = 79/162 (48.77%), Query Frame = -2
Query:  388 ESVSSAVKTIMSKIGRIDILVNNAGIASAGPLAELPLDAIRKAWEINTLGQLRLVQNVVPYMASRRSGSIVNVASVVGKVPTPWAGSYCASKAAVLAMSDTLRVELRPFGIDVVKVLPGAVRSNFGSNSMEGLRNHDWKLYKEFKEAIAERARASQGGKSTD 873
            + V + +K ++S+ G +D+LVNNAGI     L  +         + N  G    +Q   P M  +RSG+I+N++SVVG V  P   +Y A+KA V+ ++ +   EL   GI V  V PG + S+               L  E KE +  +   ++ G+ TD
Sbjct:   67 DEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTD-----------ALSDELKEQMLTQIPLARFGQDTD 217          
BLAST of CX078580 vs. ExPASy Swiss-Prot
Match: FABG_STAAR (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain MRSA252) GN=fabG PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.824e-14
Identity = 50/162 (30.86%), Postives = 79/162 (48.77%), Query Frame = -2
Query:  388 ESVSSAVKTIMSKIGRIDILVNNAGIASAGPLAELPLDAIRKAWEINTLGQLRLVQNVVPYMASRRSGSIVNVASVVGKVPTPWAGSYCASKAAVLAMSDTLRVELRPFGIDVVKVLPGAVRSNFGSNSMEGLRNHDWKLYKEFKEAIAERARASQGGKSTD 873
            + V + +K ++S+ G +D+LVNNAGI     L  +         + N  G    +Q   P M  +RSG+I+N++SVVG V  P   +Y A+KA V+ ++ +   EL   GI V  V PG + S+               L  E KE +  +   ++ G+ TD
Sbjct:   67 DEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTD-----------ALSDELKEQMLTQIPLARFGQDTD 217          
The following BLAST results are available for this feature:
BLAST of CX078580 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 128
Match NameE-valueIdentityDescription
FABG_STAEQ6.268e-1530.253-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
DHRS7_MOUSE6.268e-1533.33Dehydrogenase/reductase SDR family member 7 OS=Mus... [more]
DHRS7_ANOGA6.268e-1529.44Dehydrogenase/reductase SDR family protein 7-like ... [more]
YOXD_BACSU8.186e-1533.87Uncharacterized oxidoreductase yoxD OS=Bacillus su... [more]
DHRS7_DROME1.069e-1433.59Dehydrogenase/reductase SDR family protein 7-like ... [more]
DRS7C_BOVIN1.396e-1432.37Dehydrogenase/reductase SDR family member 7C OS=Bo... [more]
YM71_YEAST1.824e-1431.13Uncharacterized oxidoreductase YMR226C OS=Saccharo... [more]
FABG_STAAW1.824e-1430.863-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAAS1.824e-1430.863-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAAR1.824e-1430.863-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_9H09_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-9H09-O17-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX078580 ID=CX078580; Name=CX078580; organism=Citrus sinensis; type=EST; length=877bp
CAAAGTAATTTTATAAAAATTTAATAAAAACTCTTATTGACAACTAAACA
ACTAAATTTTTTTATGTAAAAGCTCTATCATCAAAAGATTTACTTAAATA
AGCTCTATTTAAAGCTGTACCAAATAGAGCCTAAATCTAATGGCGTCAAA
TTTATGAAGTACATGTGAACATTCTTCTAATTATTTATAAAATAGTAAAT
GGCAAACAGCCCCAAATCTTTAGACCTCCTTGTTTAGACTAAAACGAGTC
GAAAAGAACAAATCTCTCACCCAAAGTGGAGACCAAGAAAGCATAGCAAA
TAAACCAGTCATGTGACCGAATGCAATTTGCTTTGGTGGTCTGGGACTCA
AAACTTTCTTCGCCACATGCCTTGCGAACAAAGTAGCATCAGTTGATTTA
CCACCCTGAGAAGCCCTAGCTCGCTCGGCAATAGCCTCTTTGAATTCCTT
GTAGAGTTTCCAATCATGATTCCTCAAACCTTCCATGCTATTACTGCCAA
AATTTGATCTTACAGCACCAGGGAGTACTTTCACTACATCAATACCAAAA
GGCCTTAATTCAACGCGCAAAGTATCGGACATGGCAAGCACTGCAGCCTT
GCTAGCACAATAAGACCCTGCCCACGGTGTTGGCACTTTTCCTACAACAC
TTGCTACATTTACGATGCTCCCACTGCGCCTTGAAGCCATGTATGGAACA
ACATTTTGCACCAACCTTAATTGCCCTAATGTGTTAATTTCCCAAGCTTT
CCTTATAGCGTCTAGTGGAAGCTCGGCTAGAGGGCCGGCACTTGCTATAC
CAGCATTGTTGACCAGAATGTCTATACGGCCAATTTTTGACATGATTGTT
TTCACTGCTGATGATACACTTTCATCT
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