CX078580

Overview
NameCX078580
Unique NameCX078580
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length877
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX078580 vs. ExPASy Swiss-Prot
Match: MKAR_AJECN (3-ketoacyl-CoA reductase OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=HCAG_07127 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.486e-12
Identity = 43/109 (39.45%), Postives = 57/109 (52.29%), Query Frame = -2
Query:  505 IDILVNNAGIASA--GPLAELPLDAIRKAWEINTLGQLRLVQNVVPYMASRRSGSIVNVASVVGKVPTPWAGSYCASKAAVLAMSDTLRVELRPFGIDVVKVLPGAVRS 825
            I ILVNN G + +   P    PL+ +     IN  G LR+ Q V P M  R+ G I+ +AS  G +PTP   +YC SKA +   S  L  EL+P+G+ V  V    V S
Sbjct:  140 ISILVNNVGRSHSIPTPFVLTPLEELENIIMINCTGTLRITQLVAPGMMQRKRGLILTMASFAGMIPTPLLATYCGSKAFLQYWSIALGAELQPYGVQVELVQSHLVTS 248          
BLAST of CX078580 vs. ExPASy Swiss-Prot
Match: LINC_PSEPA (2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase OS=Pseudomonas paucimobilis GN=linC PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.486e-12
Identity = 46/134 (34.33%), Postives = 70/134 (52.24%), Query Frame = -2
Query:  481 DESVSSAVKTIMSKIGRIDILVNNAGIASAG-PLAELPLDAIRKAWEINTLGQLRLVQNVVPYMASRRS-GSIVNVASVVGKVPTPWAGSYCASKAAVLAMSDTLRVELRPFGIDVVKVLPGAVRSNFGSNSME 876
            +E V + V   ++  G +D   NNA I  AG PLAE+ L+  R++ +IN  G    ++  +  M  R + GSIVN AS  G V  P  G Y  +K AV+ ++     +    GI V  ++PGAVR+     +M+
Sbjct:   64 EEDVKALVAQTLAAFGGLDGSFNNAAIPQAGLPLAEVSLERFRQSMDINVTGTFLCMKYQILAMIERGTKGSIVNTASAAGVVGVPMHGEYVGAKHAVVGLTRVAAADYGKHGIRVNALVPGAVRTPMLQRAMD 197          
BLAST of CX078580 vs. ExPASy Swiss-Prot
Match: FABG_VIBCH (3-oxoacyl-[acyl-carrier-protein] reductase OS=Vibrio cholerae GN=fabG PE=3 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 6.486e-12
Identity = 41/124 (33.06%), Postives = 64/124 (51.61%), Query Frame = -2
Query:  502 ESVSSAVKTIMSKIGRIDILVNNAGIASAGPLAELPLDAIRKAWEINTLGQLRLVQNVVPYMASRRSGSIVNVASVVGKVPTPWAGSYCASKAAVLAMSDTLRVELRPFGIDVVKVLPGAVRSN 873
            ES+ + +K I  + G +DILVNNAGI     L  +  +      E N     RL + V+  M  +R G I+NV SVVG +      +Y A+KA V+  + ++  E+   G+ V  V PG + ++
Sbjct:   64 ESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETD 187          
BLAST of CX078580 vs. ExPASy Swiss-Prot
Match: FABG_RICPR (3-oxoacyl-[acyl-carrier-protein] reductase OS=Rickettsia prowazekii GN=fabG PE=1 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 8.471e-12
Identity = 45/142 (31.69%), Postives = 71/142 (50.00%), Query Frame = -2
Query:  421 IMSKIGRIDILVNNAGIASAGPLAELPLDAIRKAWEINTLGQLRLVQNVVPYMASRRSGSIVNVASVVGKVPTPWAGSYCASKAAVLAMSDTLRVELRPFGIDVVKVLPGAVRSNFGSNSMEGLRNHDWKLYKEFKEAIAER 846
            ++SK   +DILV NAGI S      +      K  +IN      L +  +  M  +R G I+N++S+VG    P   +YCASKA ++ M+ +L  E+   GI V  V PG ++S+              KL ++ +EAI ++
Sbjct:   70 LISKTSNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPGQANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTD-----------KLNEKQREAIVQK 200          
BLAST of CX078580 vs. ExPASy Swiss-Prot
Match: DR9C7_HUMAN (Short chain dehydrogenase/reductase family 9C member 7 OS=Homo sapiens GN=SDR9C7 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.471e-12
Identity = 51/155 (32.90%), Postives = 82/155 (52.90%), Query Frame = -2
Query:  424 ESVSSAVKTIMSKIGRIDI--LVNNAGIA-SAGPLAELPLDAIRKAWEINTLGQLRLVQNVVPYMASRRSGSIVNVASVVGKVPTPWAGSYCASKAAVLAMSDTLRVELRPFGIDVVKVLPGAVRSN-FGSNSMEGLRNHDW-KLYKEFKEAIAE 873
            ES+ +A + +  K+G   +  LVNNAG+   +GP   L  D   K   +N +G + +  +++P M  R  G +VN++S  G+V     G YC SK  V A SD++R EL  FG+ V  + PG  R+   G  ++E      W +L +E +++  E
Sbjct:   84 ESIKAAAQWVRDKVGEQGLWALVNNAGVGLPSGPNEWLTKDDFVKVINVNLVGLIEVTLHMLP-MVKRARGRVVNMSSSGGRVAVI-GGGYCVSKFGVEAFSDSIRRELYYFGVKVCIIEPGNYRTAILGKENLESRMRKLWERLPQETRDSYGE 236          
BLAST of CX078580 vs. ExPASy Swiss-Prot
Match: VIBA_VIBCH (Vibriobactin-specific 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase OS=Vibrio cholerae GN=vibA PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.106e-11
Identity = 41/123 (33.33%), Postives = 63/123 (51.22%), Query Frame = -2
Query:  505 ESVSSAVKTIMSKIGRIDILVNNAGIASAGPLAELPLDAIRKAWEINTLGQLRLVQNVVPYMASRRSGSIVNVASVVGKVPTPWAGSYCASKAAVLAMSDTLRVELRPFGIDVVKVLPGAVRS 873
            E+V   V     ++   D LV  AGI    PL E+P++ +   + +N  G L  +Q V   M +R+ GS+V + S     P    G+Y ASKAA+  +   + +EL P+GI    V PG+ R+
Sbjct:   71 EAVREQVNQWAEQVAGFDHLVCCAGILHVAPLHEMPMEQVSSIFTVNAFGVLACMQGVASSMKARQQGSMVIIGSNAANTPRMSIGAYGASKAALHMLVKCIGMELAPYGIRCNLVSPGSTRT 193          
BLAST of CX078580 vs. ExPASy Swiss-Prot
Match: NODG_RHIME (Nodulation protein G OS=Rhizobium meliloti GN=nodG PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.106e-11
Identity = 40/107 (37.38%), Postives = 54/107 (50.47%), Query Frame = -2
Query:  505 IDILVNNAGIASAGPLAELPLDAIRKAWEINTLGQLRLVQNVVPYMASRRSGSIVNVASVVGKVPTPWAGSYCASKAAVLAMSDTLRVELRPFGIDVVKVLPGAVRS 825
            +DILVNNAGI   G    +         E+N     RL + +   M  RR+G I+NV SV G +  P   +YCASKA ++  S +L  E+    I V  V PG + S
Sbjct:   81 VDILVNNAGITKDGLFLHMADPDWDIVLEVNLTAMFRLTREITQQMIRRRNGRIINVTSVAGAIGNPGQTNYCASKAGMIGFSKSLAQEIATRNITVNCVAPGFIES 187          
BLAST of CX078580 vs. ExPASy Swiss-Prot
Match: FABG_RICFE (3-oxoacyl-[acyl-carrier-protein] reductase OS=Rickettsia felis GN=fabG PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.106e-11
Identity = 47/153 (30.72%), Postives = 74/153 (48.37%), Query Frame = -2
Query:  388 IMSKIGRIDILVNNAGIASAGPLAELPLDAIRKAWEINTLGQLRLVQNVVPYMASRRSGSIVNVASVVGKVPTPWAGSYCASKAAVLAMSDTLRVELRPFGIDVVKVLPGAVRSNFGSNSMEGLRNHDWKLYKEFKEAIAERARASQGGKSTD 846
            ++SK  ++DILV NAGI S      +  +   K  +IN      L +  +  M   R G I+N++S+VG    P   +YCASKA ++ M+ +L  E+   GI V  V PG ++S+              KL ++ +EAI ++      G   D
Sbjct:   70 LISKAPKLDILVCNAGITSDTLAIRMKDEDFDKVIDINLKANFILNREAIKKMMQNRYGRIINISSIVGISGNPGQANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTD-----------KLNEKQREAIVQKIPLGTYGMPED 211          
BLAST of CX078580 vs. ExPASy Swiss-Prot
Match: FABG_HAEIN (3-oxoacyl-[acyl-carrier-protein] reductase OS=Haemophilus influenzae GN=fabG PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.445e-11
Identity = 42/124 (33.87%), Postives = 64/124 (51.61%), Query Frame = -2
Query:  502 ESVSSAVKTIMSKIGRIDILVNNAGIASAGPLAELPLDAIRKAWEINTLGQLRLVQNVVPYMASRRSGSIVNVASVVGKVPTPWAGSYCASKAAVLAMSDTLRVELRPFGIDVVKVLPGAVRSN 873
            ES+ + ++ I +  G IDILVNNAGI     L  +  +      + N      L + ++  M  +R G I+N+ SVVG    P   +YCA+KA V+  S +L  E+   GI V  V PG + ++
Sbjct:   62 ESIETLLEQIKNDFGDIDILVNNAGITRDNLLMRMKDEEWFDIMQTNLTSVYHLSKAMLRSMMKKRFGRIINIGSVVGSTGNPGQTNYCAAKAGVVGFSKSLAKEVAARGITVNVVAPGFIATD 185          
BLAST of CX078580 vs. ExPASy Swiss-Prot
Match: DHI2_HUMAN (Corticosteroid 11-beta-dehydrogenase isozyme 2 OS=Homo sapiens GN=HSD11B2 PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.445e-11
Identity = 43/105 (40.95%), Postives = 57/105 (54.29%), Query Frame = -2
Query:  505 LVNNAGIASAGPLAEL-PLDAIRKAWEINTLGQLRLVQNVVPYMASRRSGSIVNVASVVGKVPTPWAGSYCASKAAVLAMSDTLRVELRPFGIDVVKVLPGAVRS 816
            LVNNAG       AEL P+   R   E+N  G L L + ++P + S R G IV V S  G +P P  G+Y  SKAAV  + DT   EL P+G+ V  + PG  ++
Sbjct:  164 LVNNAGHNEVVADAELSPVATFRSCMEVNFFGALELTKGLLPLLRSSR-GRIVTVGSPAGDMPYPCLGAYGTSKAAVALLMDTFSCELLPWGVKVSIIQPGCFKT 267          
The following BLAST results are available for this feature:
BLAST of CX078580 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 128
Match NameE-valueIdentityDescription
MKAR_AJECN6.486e-1239.453-ketoacyl-CoA reductase OS=Ajellomyces capsulata ... [more]
LINC_PSEPA6.486e-1234.332,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydroge... [more]
FABG_VIBCH6.486e-1233.063-oxoacyl-[acyl-carrier-protein] reductase OS=Vibr... [more]
FABG_RICPR8.471e-1231.693-oxoacyl-[acyl-carrier-protein] reductase OS=Rick... [more]
DR9C7_HUMAN8.471e-1232.90Short chain dehydrogenase/reductase family 9C memb... [more]
VIBA_VIBCH1.106e-1133.33Vibriobactin-specific 2,3-dihydro-2,3-dihydroxyben... [more]
NODG_RHIME1.106e-1137.38Nodulation protein G OS=Rhizobium meliloti GN=nodG... [more]
FABG_RICFE1.106e-1130.723-oxoacyl-[acyl-carrier-protein] reductase OS=Rick... [more]
FABG_HAEIN1.445e-1133.873-oxoacyl-[acyl-carrier-protein] reductase OS=Haem... [more]
DHI2_HUMAN1.445e-1140.95Corticosteroid 11-beta-dehydrogenase isozyme 2 OS=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_9H09_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-9H09-O17-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX078580 ID=CX078580; Name=CX078580; organism=Citrus sinensis; type=EST; length=877bp
CAAAGTAATTTTATAAAAATTTAATAAAAACTCTTATTGACAACTAAACA
ACTAAATTTTTTTATGTAAAAGCTCTATCATCAAAAGATTTACTTAAATA
AGCTCTATTTAAAGCTGTACCAAATAGAGCCTAAATCTAATGGCGTCAAA
TTTATGAAGTACATGTGAACATTCTTCTAATTATTTATAAAATAGTAAAT
GGCAAACAGCCCCAAATCTTTAGACCTCCTTGTTTAGACTAAAACGAGTC
GAAAAGAACAAATCTCTCACCCAAAGTGGAGACCAAGAAAGCATAGCAAA
TAAACCAGTCATGTGACCGAATGCAATTTGCTTTGGTGGTCTGGGACTCA
AAACTTTCTTCGCCACATGCCTTGCGAACAAAGTAGCATCAGTTGATTTA
CCACCCTGAGAAGCCCTAGCTCGCTCGGCAATAGCCTCTTTGAATTCCTT
GTAGAGTTTCCAATCATGATTCCTCAAACCTTCCATGCTATTACTGCCAA
AATTTGATCTTACAGCACCAGGGAGTACTTTCACTACATCAATACCAAAA
GGCCTTAATTCAACGCGCAAAGTATCGGACATGGCAAGCACTGCAGCCTT
GCTAGCACAATAAGACCCTGCCCACGGTGTTGGCACTTTTCCTACAACAC
TTGCTACATTTACGATGCTCCCACTGCGCCTTGAAGCCATGTATGGAACA
ACATTTTGCACCAACCTTAATTGCCCTAATGTGTTAATTTCCCAAGCTTT
CCTTATAGCGTCTAGTGGAAGCTCGGCTAGAGGGCCGGCACTTGCTATAC
CAGCATTGTTGACCAGAATGTCTATACGGCCAATTTTTGACATGATTGTT
TTCACTGCTGATGATACACTTTCATCT
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