CX078580

Overview
NameCX078580
Unique NameCX078580
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length877
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX078580 vs. ExPASy Swiss-Prot
Match: BDH_BOVIN (D-beta-hydroxybutyrate dehydrogenase, mitochondrial OS=Bos taurus GN=BDH1 PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.445e-11
Identity = 45/147 (30.61%), Postives = 73/147 (49.66%), Query Frame = -2
Query:  388 LVNNAGIASAGPLAELPLDAIRKAWEINTLGQLRLVQNVVPYMASRRSGSIVNVASVVGKVPTPWAGSYCASKAAVLAMSDTLRVELRPFGIDVVKVLPG----AVRSNFGSNSMEGLRNHDWKLYKEFKEAIAERARASQGGKSTD 816
            LVNNAGI++ G +    ++  ++  E+N  G +R+ +  +P +  R  G +VN++S++G++       YC +K  V A SD LR E+ P G+ V  V PG    A     G+  ++ + N  W       E + E  R   G K  D
Sbjct:  141 LVNNAGISTFGDVEFTSMETYKEVAEVNLWGTVRVTKAFLP-LIRRAKGRVVNISSMMGRMANVARSPYCITKFGVEAFSDCLRYEMHPLGVKVSVVEPGNFIAATSLYGGTERIQAIANKMW-------EELPEVVRQDYGRKYFD 279          
BLAST of CX078580 vs. ExPASy Swiss-Prot
Match: FABG_VIBHA (3-oxoacyl-[acyl-carrier-protein] reductase OS=Vibrio harveyi GN=fabG PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.887e-11
Identity = 42/124 (33.87%), Postives = 65/124 (52.42%), Query Frame = -2
Query:  502 ESVSSAVKTIMSKIGRIDILVNNAGIASAGPLAELPLDAIRKAWEINTLGQLRLVQNVVPYMASRRSGSIVNVASVVGKVPTPWAGSYCASKAAVLAMSDTLRVELRPFGIDVVKVLPGAVRSN 873
            ES+ + +KTI  + G IDILVNNAGI     L  +  D        N     R+ + V+  M  +R+G I+NV SVVG +      +Y A+KA V+  + ++  E+   G+ V  V PG + ++
Sbjct:   64 ESIEATLKTINDECGAIDILVNNAGITRDNLLMRMKDDEWNDIINTNLTPIYRMSKAVLRGMMKKRAGRIINVGSVVGTMGNAGQTNYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETD 187          
BLAST of CX078580 vs. ExPASy Swiss-Prot
Match: DHRS4_BOVIN (Dehydrogenase/reductase SDR family member 4 OS=Bos taurus GN=DHRS4 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.887e-11
Identity = 42/120 (35.00%), Postives = 65/120 (54.17%), Query Frame = -2
Query:  499 VKTIMSKIGRIDILVNNAGIASA-GPLAELPLDAIRKAWEINTLGQLRLVQNVVPYMASRRSGSIVNVASVVGKVPTPWAGSYCASKAAVLAMSDTLRVELRPFGIDVVKVLPGAVRSNF 855
            V T +   G +DIL++NA ++   G L ++P +   K  ++N      L + VVP MA R  GSIV V+S+    P P  G Y  SK A+L ++  L +EL    + V  + PG +R++F
Sbjct:   82 VATAVKLHGGVDILISNAAVSPFFGSLMDVPEEVWDKILDVNVKATALLTKAVVPEMAKRGGGSIVIVSSIAAYSPFPSLGPYNVSKTALLGLTKNLALELAESNVRVNCLAPGLIRTSF 201          
BLAST of CX078580 vs. ExPASy Swiss-Prot
Match: DHG2_BACME (Glucose 1-dehydrogenase 2 OS=Bacillus megaterium GN=gdhII PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.887e-11
Identity = 38/123 (30.89%), Postives = 66/123 (53.66%), Query Frame = -2
Query:  511 DESVSSAVKTIMSKIGRIDILVNNAGIASAGPLAELPLDAIRKAWEINTLGQLRLVQNVVPYMASRR-SGSIVNVASVVGKVPTPWAGSYCASKAAVLAMSDTLRVELRPFGIDVVKVLPGAV 876
            +E V + V+T + + G +D+++NNAG+ +  P  EL L+   +  + N  G     +  + Y       G+++N++SV   +P P    Y ASK  +  M++TL +E  P GI V  + PGA+
Sbjct:   69 EEDVVNLVETAVKEFGSLDVMINNAGVENPVPSHELSLENWNQVIDTNLTGAFLGSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAI 191          
BLAST of CX078580 vs. ExPASy Swiss-Prot
Match: DHB13_RAT (17-beta hydroxysteroid dehydrogenase 13 OS=Rattus norvegicus GN=Hsd17b13 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.887e-11
Identity = 43/129 (33.33%), Postives = 64/129 (49.61%), Query Frame = -2
Query:  490 VSSAVKTIMSKIGRIDILVNNAGIASAGPLAELPLDAIRKAWEINTLGQLRLVQNVVPYMASRRSGSIVNVASVVGKVPTPWAGSYCASKAAVLAMSDTLRVELRPFGIDVVK---VLPGAVRSNFGSN 867
            +  +V  +  ++G I+I+VNNAG      L     + I K +E+N LG   +++ ++P M  R SG IV VASV G    P+   YC+SK A +     L  EL   G   +K   + P  V + F  N
Sbjct:  100 IYKSVDQVKKEVGDIEIVVNNAGAIYPADLLSTKDEEITKTFEVNILGHFWIIKALLPSMLRRNSGHIVTVASVCGHRVIPYLIPYCSSKFAAVGFHRALTAELDTLGKTGIKTSCLCPVFVNTGFTKN 228          
BLAST of CX078580 vs. ExPASy Swiss-Prot
Match: FABG_RICBR (3-oxoacyl-[acyl-carrier-protein] reductase OS=Rickettsia bellii (strain RML369-C) GN=fabG PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.465e-11
Identity = 48/164 (29.27%), Postives = 75/164 (45.73%), Query Frame = -2
Query:  355 IMSKIGRIDILVNNAGIASAGPLAELPLDAIRKAWEINTLGQLRLVQNVVPYMASRRSGSIVNVASVVGKVPTPWAGSYCASKAAVLAMSDTLRVELRPFGIDVVKVLPGAVRSNFGSNSMEGLRNHDWKLYKEFKEAIAERARASQGGKSTDATLFARHVAKK 846
            ++++I ++DILV NAGI        +  +   +  +IN      L +  +  M + R G I+N+ S+VG    P   +YCASKA ++ M+ +L  E+   GI V  V PG ++S+              KL  E KEAI  +      G   D       +A K
Sbjct:   70 LVAQIEKLDILVCNAGITKDTLAIRMKNEDFDQVIDINLKANFILNREAIKKMMTNRYGRIINITSIVGVSGNPGQANYCASKAGLIGMTKSLAYEVATRGITVNAVAPGFIKSDMTD-----------KLNDEQKEAITRKIPKGTYGMPEDIANAVAFLASK 222          
BLAST of CX078580 vs. ExPASy Swiss-Prot
Match: FABG_BACSU (3-oxoacyl-[acyl-carrier-protein] reductase OS=Bacillus subtilis GN=fabG PE=3 SV=3)

HSP 1 Score: 69.707 bits (169), Expect = 2.465e-11
Identity = 47/173 (27.17%), Postives = 80/173 (46.24%), Query Frame = -2
Query:  355 ESVSSAVKTIMSKIGRIDILVNNAGIASAGPLAELPLDAIRKAWEINTLGQLRLVQNVVPYMASRRSGSIVNVASVVGKVPTPWAGSYCASKAAVLAMSDTLRVELRPFGIDVVKVLPGAVRSNFGSNSMEGLRNHDWKLYKEFKEAIAERARASQGGKSTDATLFARHVAKK 873
            E V + +K  +S    IDILVNNAGI     +  +  D       IN  G     + V   M  +RSG I+NV+S+VG    P   +Y A+KA V+ ++ +   EL    I V  + PG + ++              KL K+ ++ + ++   ++ G+ +D +     +A +
Sbjct:   67 EDVQNMIKETLSVFSTIDILVNNAGITRDNLIMRMKEDEWDDVININLKGVFNCTKAVTRQMMKQRSGRIINVSSIVGVSGNPGQANYVAAKAGVIGLTKSSAKELASRNITVNAIAPGFISTDMTD-----------KLAKDVQDEMLKQIPLARFGEPSDVSSVVTFLASE 228          
BLAST of CX078580 vs. ExPASy Swiss-Prot
Match: DHRS3_HUMAN (Short-chain dehydrogenase/reductase 3 OS=Homo sapiens GN=DHRS3 PE=1 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 2.465e-11
Identity = 50/153 (32.68%), Postives = 73/153 (47.71%), Query Frame = -2
Query:  421 ESVSSAVKTIMSKIGRIDILVNNAGIASAGPLAELPLDAIRKAWEINTLGQLRLVQNVVPYMASRRSGSIVNVASVVGKVPTPWAGSYCASKAAVLAMSDTLRVELRPF-GIDVVKVLPGAVRSNFGSNSMEGLRNHDWKLYKEFK-EAIAER 873
            E V    K +  K+G I ILVNNA +     L +   DA+ K+  INTLGQ    +  +P M   ++G IV + SV+     P A  YC SKA+  A  ++L + L    G+    VLP     +  +   +G+R     L+   K E +A R
Sbjct:  101 EEVYQTAKAVREKVGDITILVNNAAVVHGKSLMDSDDDALLKSQHINTLGQFWTTKAFLPRMLELQNGHIVCLNSVLALSAIPGAIDYCTSKASAFAFMESLTLGLLDCPGVSATTVLP----FHTSTEMFQGMRVRFPNLFPPLKPETVARR 249          
BLAST of CX078580 vs. ExPASy Swiss-Prot
Match: DHRS3_BOVIN (Short-chain dehydrogenase/reductase 3 OS=Bos taurus GN=DHRS3 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.465e-11
Identity = 50/153 (32.68%), Postives = 73/153 (47.71%), Query Frame = -2
Query:  421 ESVSSAVKTIMSKIGRIDILVNNAGIASAGPLAELPLDAIRKAWEINTLGQLRLVQNVVPYMASRRSGSIVNVASVVGKVPTPWAGSYCASKAAVLAMSDTLRVELRPF-GIDVVKVLPGAVRSNFGSNSMEGLRNHDWKLYKEFK-EAIAER 873
            E V    K +  K+G I ILVNNA +     L +   DA+ K+  INTLGQ    +  +P M   ++G IV + SV+     P A  YC SKA+  A  ++L + L    G+    VLP     +  +   +G+R     L+   K E +A R
Sbjct:  101 EEVYQTAKAVREKVGDITILVNNAAVVHGKSLMDSDDDALPKSQHINTLGQFWTTKAFLPRMLELQNGHIVCLNSVLALSAIPGAIDYCTSKASAFAFMESLTLGLLDCPGVSATTVLP----FHTSTEMFQGMRVRFPNLFPPLKPETVARR 249          
BLAST of CX078580 vs. ExPASy Swiss-Prot
Match: DHKR_STRCM (Monensin polyketide synthase putative ketoacyl reductase OS=Streptomyces cinnamonensis PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.465e-11
Identity = 51/155 (32.90%), Postives = 73/155 (47.10%), Query Frame = -2
Query:  412 SVSSAVKTIMSKIGRIDILVNNAGIASAGPLAELPLDAIRKAWEINTLGQLRLVQNVVPY--MASRRSGSIVNVASVVGKVPTPWAGSYCASKAAVLAMSDTLRVELRPFGIDVVKVLPGAVRSNFGSNSMEGLRNHDWKLYKEFKEAIAERARA 870
            SV++ V+  + + GRID+LVNNAG +  G  A+L  +      + N     R+ + V+    M +R  G I+NVAS  GK        Y ASK  V+  +  L  EL P GI V  V PG V +       +G        Y   +EAI  + +A
Sbjct:   69 SVTAFVQAAVDRYGRIDVLVNNAGRSGGGVTADLTDELWDDVIDTNLNSVFRMTRAVLTTGGMRTRERGRIINVASTAGKQGVVLGAPYSASKHGVVGFTKALGNELAPTGITVNAVCPGYVETPMAQRVRQGYA----AAYDTTEEAILTKFQA 219          
The following BLAST results are available for this feature:
BLAST of CX078580 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 128
Match NameE-valueIdentityDescription
BDH_BOVIN1.445e-1130.61D-beta-hydroxybutyrate dehydrogenase, mitochondria... [more]
FABG_VIBHA1.887e-1133.873-oxoacyl-[acyl-carrier-protein] reductase OS=Vibr... [more]
DHRS4_BOVIN1.887e-1135.00Dehydrogenase/reductase SDR family member 4 OS=Bos... [more]
DHG2_BACME1.887e-1130.89Glucose 1-dehydrogenase 2 OS=Bacillus megaterium G... [more]
DHB13_RAT1.887e-1133.3317-beta hydroxysteroid dehydrogenase 13 OS=Rattus ... [more]
FABG_RICBR2.465e-1129.273-oxoacyl-[acyl-carrier-protein] reductase OS=Rick... [more]
FABG_BACSU2.465e-1127.173-oxoacyl-[acyl-carrier-protein] reductase OS=Baci... [more]
DHRS3_HUMAN2.465e-1132.68Short-chain dehydrogenase/reductase 3 OS=Homo sapi... [more]
DHRS3_BOVIN2.465e-1132.68Short-chain dehydrogenase/reductase 3 OS=Bos tauru... [more]
DHKR_STRCM2.465e-1132.90Monensin polyketide synthase putative ketoacyl red... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_9H09_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-9H09-O17-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX078580 ID=CX078580; Name=CX078580; organism=Citrus sinensis; type=EST; length=877bp
CAAAGTAATTTTATAAAAATTTAATAAAAACTCTTATTGACAACTAAACA
ACTAAATTTTTTTATGTAAAAGCTCTATCATCAAAAGATTTACTTAAATA
AGCTCTATTTAAAGCTGTACCAAATAGAGCCTAAATCTAATGGCGTCAAA
TTTATGAAGTACATGTGAACATTCTTCTAATTATTTATAAAATAGTAAAT
GGCAAACAGCCCCAAATCTTTAGACCTCCTTGTTTAGACTAAAACGAGTC
GAAAAGAACAAATCTCTCACCCAAAGTGGAGACCAAGAAAGCATAGCAAA
TAAACCAGTCATGTGACCGAATGCAATTTGCTTTGGTGGTCTGGGACTCA
AAACTTTCTTCGCCACATGCCTTGCGAACAAAGTAGCATCAGTTGATTTA
CCACCCTGAGAAGCCCTAGCTCGCTCGGCAATAGCCTCTTTGAATTCCTT
GTAGAGTTTCCAATCATGATTCCTCAAACCTTCCATGCTATTACTGCCAA
AATTTGATCTTACAGCACCAGGGAGTACTTTCACTACATCAATACCAAAA
GGCCTTAATTCAACGCGCAAAGTATCGGACATGGCAAGCACTGCAGCCTT
GCTAGCACAATAAGACCCTGCCCACGGTGTTGGCACTTTTCCTACAACAC
TTGCTACATTTACGATGCTCCCACTGCGCCTTGAAGCCATGTATGGAACA
ACATTTTGCACCAACCTTAATTGCCCTAATGTGTTAATTTCCCAAGCTTT
CCTTATAGCGTCTAGTGGAAGCTCGGCTAGAGGGCCGGCACTTGCTATAC
CAGCATTGTTGACCAGAATGTCTATACGGCCAATTTTTGACATGATTGTT
TTCACTGCTGATGATACACTTTCATCT
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