CX078574

Overview
NameCX078574
Unique NameCX078574
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length579
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX078574 vs. ExPASy Swiss-Prot
Match: S23A2_XENTR (Solute carrier family 23 member 2 OS=Xenopus tropicalis GN=slc23a2 PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.455e-30
Identity = 70/196 (35.71%), Postives = 110/196 (56.12%), Query Frame = 2
Query:   32 LLLLVWQY-----LPHVIKRGKN--------IFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTD-RAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGIGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGK 577
            L+LL  QY     LP  I + K         +F  F +I ++++ W+   + TV   +   + K     RTD R G++  APW +VP+PFQWG P+  A     M+ A   +++ES G ++A AR + A P P   ++RG+  +G+  +L G+FGT NG++ S  N G+L +T+V SRRV+Q  A FM+   ++GK
Sbjct:  277 LVLLFSQYARNVKLPLPIYKSKKGWTAYKLQLFKMFPIIMAILVSWLLCFIFTVTDVFPPDSSKYGYYARTDARQGVLTVAPWFKVPYPFQWGLPTVSAAGVIGMLSAVVASIIESIGDYYACARLSCAPPPPIHAINRGIFIEGLSCVLDGVFGTGNGSTSSSPNIGVLGITKVASRRVIQYGAAFMLLLGMIGK 472          
BLAST of CX078574 vs. ExPASy Swiss-Prot
Match: S23A2_HUMAN (Solute carrier family 23 member 2 OS=Homo sapiens GN=SLC23A2 PE=1 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 5.530e-30
Identity = 61/165 (36.97%), Postives = 99/165 (60.00%), Query Frame = 2
Query:   86 IFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTD-RAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGIGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGK 577
            +F  F +I ++++ W+   + TV   +   + K     RTD R G++  APW +VP+PFQWG P+  A     M+ A   +++ES G ++A AR + A P P   ++RG+  +G+  +L G+FGT NG++ S  N G+L +T+VGSRRV+Q  A  M+   ++GK
Sbjct:  310 LFKMFPIILAILVSWLLCFIFTVTDVFPPDSTKYGFYARTDARQGVLLVAPWFKVPYPFQWGLPTVSAAGVIGMLSAVVASIIESIGDYYACARLSCAPPPPIHAINRGIFVEGLSCVLDGIFGTGNGSTSSSPNIGVLGITKVGSRRVIQCGAALMLALGMIGK 474          
BLAST of CX078574 vs. ExPASy Swiss-Prot
Match: S23A2_RAT (Solute carrier family 23 member 2 OS=Rattus norvegicus GN=Slc23a2 PE=2 SV=2)

HSP 1 Score: 127.872 bits (320), Expect = 3.584e-29
Identity = 60/165 (36.36%), Postives = 98/165 (59.39%), Query Frame = 2
Query:   86 IFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTD-RAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGIGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGK 577
            +F  F +I ++++ W+   + TV   +   +       RTD R G++  APW +VP+PFQWG P+  A     M+ A   +++ES G ++A AR + A P P   ++RG+  +G+  +L G+FGT NG++ S  N G+L +T+VGSRRV+Q  A  M+   ++GK
Sbjct:  307 LFKMFPIILAILVSWLLCFIFTVTDVFPSNSTDYGYYARTDARKGVLLVAPWFKVPYPFQWGMPTVSAAGVIGMLSAVVASIIESIGDYYACARLSCAPPPPIHAINRGIFVEGLSCVLDGVFGTGNGSTSSSPNIGVLGITKVGSRRVIQYGAALMLGLGMIGK 471          
BLAST of CX078574 vs. ExPASy Swiss-Prot
Match: S23A2_MOUSE (Solute carrier family 23 member 2 OS=Mus musculus GN=Slc23a2 PE=1 SV=2)

HSP 1 Score: 127.872 bits (320), Expect = 3.584e-29
Identity = 60/165 (36.36%), Postives = 98/165 (59.39%), Query Frame = 2
Query:   86 IFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTD-RAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGIGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGK 577
            +F  F +I ++++ W+   + TV   +   +       RTD R G++  APW +VP+PFQWG P+  A     M+ A   +++ES G ++A AR + A P P   ++RG+  +G+  +L G+FGT NG++ S  N G+L +T+VGSRRV+Q  A  M+   ++GK
Sbjct:  308 LFKMFPIILAILVSWLLCFIFTVTDVFPSNSTDYGYYARTDARKGVLLVAPWFKVPYPFQWGMPTVSAAGVIGMLSAVVASIIESIGDYYACARLSCAPPPPIHAINRGIFVEGLSCVLDGIFGTGNGSTSSSPNIGVLGITKVGSRRVIQYGAALMLGLGMVGK 472          
BLAST of CX078574 vs. ExPASy Swiss-Prot
Match: S23A1_HUMAN (Solute carrier family 23 member 1 OS=Homo sapiens GN=SLC23A1 PE=1 SV=2)

HSP 1 Score: 127.487 bits (319), Expect = 4.681e-29
Identity = 72/196 (36.73%), Postives = 107/196 (54.59%), Query Frame = 2
Query:   32 LLLLVWQYLPH------VIKRGKN-------IFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDRAGLIDA-APWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGIGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGK 577
            L++L  QYL +      V + GK        IF  F ++ +++ VW+  ++LT+               RTD  G I A APWIR+P+P QWG P+  A     M  A+   ++ES G ++A AR A A P P   ++RG+  +GI  +++GL GT NG++ S  N G+L +T+VGSRRVVQ  A  M+    +GK
Sbjct:  220 LIILFSQYLRNLTFLLPVYRWGKGLTLLRIQIFKMFPIMLAIMTVWLLCYVLTLTDVLPTDPKAYGFQARTDARGDIMAIAPWIRIPYPCQWGLPTVTAAAVLGMFSATLAGIIESIGDYYACARLAGAPPPPVHAINRGIFTEGICCIIAGLLGTGNGSTSSSPNIGVLGITKVGSRRVVQYGAAIMLVLGTIGK 415          
BLAST of CX078574 vs. ExPASy Swiss-Prot
Match: S23A1_MOUSE (Solute carrier family 23 member 1 OS=Mus musculus GN=Slc23a1 PE=1 SV=2)

HSP 1 Score: 127.102 bits (318), Expect = 6.114e-29
Identity = 63/165 (38.18%), Postives = 95/165 (57.58%), Query Frame = 2
Query:   86 IFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDRAGLIDA-APWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGIGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGK 577
            IF  F ++ +++ VW+  ++LT+               RTD  G I A +PWIR+P+P QWG P+        M  A+   ++ES G ++A AR A A P P   ++RG+  +GI  +++GL GT NG++ S  N G+L +T+VGSRRVVQ  AG M+    +GK
Sbjct:  258 IFKMFPIVLAIMTVWLLCYVLTLTDVLPADPTVYGFQARTDARGDIMAISPWIRIPYPCQWGLPTVTVAAVLGMFSATLAGIIESIGDYYACARLAGAPPPPVHAINRGIFTEGICCIIAGLLGTGNGSTSSSPNIGVLGITKVGSRRVVQYGAGIMLILGAIGK 422          
BLAST of CX078574 vs. ExPASy Swiss-Prot
Match: S23A1_RAT (Solute carrier family 23 member 1 OS=Rattus norvegicus GN=Slc23a1 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 7.985e-29
Identity = 62/165 (37.58%), Postives = 95/165 (57.58%), Query Frame = 2
Query:   86 IFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDRAGLIDA-APWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGIGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGK 577
            IF  F ++ +++ VW+  ++LT+               RTD  G I A +PWIR+P+P QWG P+        M  A+   ++ES G ++A AR A A P P   ++RG+  +G+  +++GL GT NG++ S  N G+L +T+VGSRRVVQ  AG M+    +GK
Sbjct:  258 IFKMFPIVLAIMTVWLLCYVLTLTDVLPADPTVYGFQARTDARGDIMAISPWIRIPYPCQWGLPTVTVAAVLGMFSATLAGIIESIGDYYACARLAGAPPPPVHAINRGIFTEGVCCIIAGLLGTGNGSTSSSPNIGVLGITKVGSRRVVQYGAGIMLILGAIGK 422          
BLAST of CX078574 vs. ExPASy Swiss-Prot
Match: NAT11_ARATH (Nucleobase-ascorbate transporter 11 OS=Arabidopsis thaliana GN=NAT11 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.034e-28
Identity = 71/200 (35.50%), Postives = 105/200 (52.50%), Query Frame = 2
Query:   32 LLLLVWQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYN---------------DAAPK---TQASCRTDRAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGIGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGK 577
            LLL+   YL  V   G  +F  +AV  S +++W YA  LTVGGAY+               D   K   T   CRTD +     A W+R+P+PFQWG P+F    +  M+  S VA V+S G + + +   +A      ++SRG+  +G   LL+G++G+  G++   EN   + +T+V SRR + I A F+I  S LGK
Sbjct:  348 LLLIFTLYLRGVSLFGHRLFRIYAVPLSALLIWTYAFFLTVGGAYDYRGCNADIPSSNILIDECKKHVYTMKHCRTDASNAWRTASWVRIPYPFQWGFPNFHMRTSIIMIFVSLVASVDSVGTYHSASMIVNAKRPTRGIVSRGIALEGFCSLLAGIWGSGTGSTTLTENIHTINITKVASRRALVIGAMFLIVLSFLGK 547          
BLAST of CX078574 vs. ExPASy Swiss-Prot
Match: NAT12_ARATH (Nucleobase-ascorbate transporter 12 OS=Arabidopsis thaliana GN=NAT12 PE=1 SV=3)

HSP 1 Score: 121.709 bits (304), Expect = 2.569e-27
Identity = 69/200 (34.50%), Postives = 106/200 (53.00%), Query Frame = 2
Query:   32 LLLLVWQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYN--DAAPKTQAS----------------CRTDRAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGIGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGK 577
            L+++   YL  +      IF  +AV  S+ I W  A LLT  GAY      P    S                CR D +  + +APW R P+P QWG P F+   AF M + S +A V+S G++ A +   ++ P    V+SR +G +G   +L+GL+GT  G++   EN   +A+T++GSRRVV++ A  ++ FS++GK
Sbjct:  343 LVIIFALYLRKISVLSHRIFLIYAVPLSLAITWAAAFLLTETGAYTYKGCDPNVPVSNVVSTHCRKYMTRMKYCRVDTSHALSSAPWFRFPYPLQWGVPLFNWKMAFVMCVVSVIASVDSVGSYHASSLLVASRPPTRGVVSRAIGLEGFTSVLAGLWGTGTGSTTLTENVHTIAVTKMGSRRVVELGACVLVIFSLVGK 542          
BLAST of CX078574 vs. ExPASy Swiss-Prot
Match: NAT9_ARATH (Putative nucleobase-ascorbate transporter 9 OS=Arabidopsis thaliana GN=NAT9 PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.409e-25
Identity = 69/176 (39.20%), Postives = 91/176 (51.70%), Query Frame = 2
Query:   65 VIKRGKNIFD-----RFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDRAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGIGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGK 577
            ++K+G  I+D     R+ ++  + +VW++A LLT  G Y+     TQ SCRTDR GLI   P            P+FD  ++FAMM ASFV L ESTG F+A ARY                                      +N GLLA+T+VGSRRV+QISA FM+FFS+ GK
Sbjct:  203 LVKKGPMIWDGNRCDRYGMMLCIPVVWLFAQLLTSSGVYDHKPQTTQTSCRTDRTGLITNTP-----------CPTFDITDSFAMMAASFVTLFESTGLFYASARYG-------------------------------------KNVGLLAMTKVGSRRVIQISAAFMLFFSIFGK 330          
The following BLAST results are available for this feature:
BLAST of CX078574 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
S23A2_XENTR1.455e-3035.71Solute carrier family 23 member 2 OS=Xenopus tropi... [more]
S23A2_HUMAN5.530e-3036.97Solute carrier family 23 member 2 OS=Homo sapiens ... [more]
S23A2_RAT3.584e-2936.36Solute carrier family 23 member 2 OS=Rattus norveg... [more]
S23A2_MOUSE3.584e-2936.36Solute carrier family 23 member 2 OS=Mus musculus ... [more]
S23A1_HUMAN4.681e-2936.73Solute carrier family 23 member 1 OS=Homo sapiens ... [more]
S23A1_MOUSE6.114e-2938.18Solute carrier family 23 member 1 OS=Mus musculus ... [more]
S23A1_RAT7.985e-2937.58Solute carrier family 23 member 1 OS=Rattus norveg... [more]
NAT11_ARATH3.034e-2835.50Nucleobase-ascorbate transporter 11 OS=Arabidopsis... [more]
NAT12_ARATH2.569e-2734.50Nucleobase-ascorbate transporter 12 OS=Arabidopsis... [more]
NAT9_ARATH1.409e-2539.20Putative nucleobase-ascorbate transporter 9 OS=Ara... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_9H05_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-9H05-O9-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX078574 ID=CX078574; Name=CX078574; organism=Citrus sinensis; type=EST; length=579bp
CTTTGTTATATTTATCCCTGAAGATTACTAATTGTTACTGCTTGTCTGGC
AGTATCTGCCTCATGTGATAAAACGTGGGAAAAATATCTTTGATCGTTTT
GCTGTCATATTTTCTGTGGTGATTGTGTGGATATATGCTCATCTACTTAC
TGTGGGTGGGGCTTATAATGATGCTGCCCCTAAGACACAAGCAAGCTGCC
GAACTGATCGTGCTGGTCTCATTGATGCTGCTCCCTGGATAAGAGTTCCG
TGGCCCTTCCAATGGGGGGCGCCTTCATTTGATGCTGGTGAAGCTTTTGC
CATGATGATGGCCTCCTTTGTTGCTCTTGTTGAGTCAACTGGTGCTTTTT
TTGCGGTAGCACGGTATGCAAGTGCAACTCCAATGCCACCTTCTGTTCTC
AGCCGTGGTGTGGGTTGGCAGGGAATTGGCATTTTGCTTTCTGGGTTATT
TGGAACTGTAAACGGAACATCGGTGTCTGTAGAGAATGCTGGTCTTTTGG
CCTTGACTAGAGTTGGCAGTCGAAGGGTTGTCCAAATATCTGCTGGATTC
ATGATATTCTTCTCTGTTCTTGGGAAATT
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