CX078572
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX078572 vs. ExPASy Swiss-Prot
Match: PTH_THEAC (Peptidyl-tRNA hydrolase OS=Thermoplasma acidophilum GN=pth PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 5.693e-17 Identity = 45/114 (39.47%), Postives = 69/114 (60.53%), Query Frame = 3 Query: 273 KLVLVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 614 K+V+ VR+DL MG GKIA+Q AHAA M+ +R + +W GQ KIVV + E+ ++ +A++ G+ +V D G TQV G+ T + +GP + +D +TGK +LL Sbjct: 4 KMVIAVRKDLDMGKGKIAAQVAHAAVTCAIRSMKINRDVFNEWYDEGQRKIVVKVNDLDEIMEIKRMADSMGIVNEIVQDRGYTQVEPGTITCIGLGPDEEEKLDKITGKYKLL 117
BLAST of CX078572 vs. ExPASy Swiss-Prot
Match: PTH_PYRAE (Peptidyl-tRNA hydrolase OS=Pyrobaculum aerophilum GN=pth PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 5.693e-17 Identity = 48/117 (41.03%), Postives = 68/117 (58.12%), Query Frame = 3 Query: 267 DLKLVLVVRQDLKMGSGKIASQCAHAATGMYAELMQSD--RHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRL 611 D+K+ + +R DLK+ GK A+Q HAA M R L +W + GQ KIV+T + + +L E A++ GLPT VV DAG T++ G+ T + +GP P LVD VTG +L Sbjct: 2 DVKMTIAIRGDLKISCGKAAAQAGHAAVECVLAAMGDAKWRKWLDQWLEEGQKKIVLTADDAAHLYQLHERAKSLGLPTAVVIDAGLTELPPGTPTAICVGPAPDELVDKVTGSLKL 118
BLAST of CX078572 vs. ExPASy Swiss-Prot
Match: PTH_STAMF (Peptidyl-tRNA hydrolase OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=pth PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 7.436e-17 Identity = 44/116 (37.93%), Postives = 67/116 (57.76%), Query Frame = 3 Query: 267 DLKLVLVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 614 + K V++VR D+KM GK+A Q AHAA E + R +W GQ KIVV +++++ K E+A+ LP ++ DAG T++ + T + IGPGP +D +TG +LL Sbjct: 6 EYKQVIIVRTDIKMSKGKLAVQVAHAAVSAAFEAYKKKREWFLEWWATGQKKIVVKGGSERDLLKYAEMAKKKDLPVAIIRDAGLTELPPNTLTAVGIGPGPSRKIDEITGDLKLL 121
BLAST of CX078572 vs. ExPASy Swiss-Prot
Match: PTH_ARCFU (Peptidyl-tRNA hydrolase OS=Archaeoglobus fulgidus GN=pth PE=1 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 7.436e-17 Identity = 52/115 (45.22%), Postives = 70/115 (60.87%), Query Frame = 3 Query: 270 LKLVLVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 614 LK V+VVR DLK+ GK+A Q AHAA Y ++SD L RKW GQ K+V+ K+ +E+ + AE+ GL T +V DAG T+V G+ T + IGP + +D VTG LL Sbjct: 3 LKQVIVVRDDLKLSRGKLAVQVAHAAIIGY---LKSDSSLRRKWLDEGQKKVVLKVKSLEELLGIKHKAESLGLVTGLVQDAGLTEVPPGTITAVVIGPDEERKIDKVTGNLPLL 114
BLAST of CX078572 vs. ExPASy Swiss-Prot
Match: PTH_THEVO (Peptidyl-tRNA hydrolase OS=Thermoplasma volcanium GN=pth PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 9.711e-17 Identity = 46/115 (40.00%), Postives = 69/115 (60.00%), Query Frame = 3 Query: 270 LKLVLVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 614 +KLV+ VR+DL MG GKIA+Q AHAA + M+ + + +W GQ KIVV N E+ + + A++ G+ V+ D G TQV G+ T + +GP + +D +TGK +LL Sbjct: 3 VKLVVAVRKDLDMGKGKIAAQVAHAAVSCAIKAMKEKKKIFDEWMDEGQKKIVVKVPNVDEIYIIKKKADSMGIINEVIQDRGYTQVEPGTVTCIGLGPDYEVYLDDITGKYKLL 117
BLAST of CX078572 vs. ExPASy Swiss-Prot
Match: PTH_AERPE (Peptidyl-tRNA hydrolase OS=Aeropyrum pernix GN=pth PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.163e-16 Identity = 46/117 (39.32%), Postives = 69/117 (58.97%), Query Frame = 3 Query: 273 KLVLVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQC----GQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRL 611 K +VVR+DL MG GK A+Q AHA+ +++S R R+W + GQ K+V+ ++ E+ +++ A GLP V DAG+TQ+ G+ T A+GP P LVD +TG +L Sbjct: 7 KQAIVVRRDLGMGRGKAAAQAAHASCEAVFLILESGRPEWRRWLEMWRLQGQAKVVLRVESLAELQEVYSKAVEEGLPASFVRDAGKTQLEPGTPTAAAVGPAPSRLVDRITGGLKL 123
BLAST of CX078572 vs. ExPASy Swiss-Prot
Match: PTH_METJA (Peptidyl-tRNA hydrolase OS=Methanocaldococcus jannaschii GN=pth PE=1 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.826e-16 Identity = 40/115 (34.78%), Postives = 69/115 (60.00%), Query Frame = 3 Query: 270 LKLVLVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 614 +K+V+V+R DL MG GK+ +Q HA + + + + + +W + GQ K+VV +++E+ ++ A + GLP ++ DAG TQ+ G+ T +AIGP +D +TG +LL Sbjct: 1 MKMVVVIRNDLGMGKGKMVAQGGHAIIEAFLDAKRKNPRAVDEWLREGQKKVVVKVNSEKELIDIYNKARSEGLPCSIIRDAGHTQLEPGTLTAVAIGPEKDEKIDKITGHLKLL 115
BLAST of CX078572 vs. ExPASy Swiss-Prot
Match: PTH_METAC (Peptidyl-tRNA hydrolase OS=Methanosarcina acetivorans GN=pth PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.690e-16 Identity = 47/116 (40.52%), Postives = 68/116 (58.62%), Query Frame = 3 Query: 267 DLKLVLVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 614 + K +V R DLK+ GK A Q AHAA +SD L KW++ GQ KIV+ +++ +L E A GLPT ++ DAG T++ AG+ TVL IGP + ++D VT +L+ Sbjct: 3 EYKQCIVTRDDLKLSKGKFAVQVAHAALSAAEWASKSD---LEKWKEGGQKKIVLRVPTIKDLYELKEKARREGLPTALIQDAGLTEIPAGTVTVLGIGPAKEEVIDKVTRDLKLV 115
BLAST of CX078572 vs. ExPASy Swiss-Prot
Match: PTH_METBU (Peptidyl-tRNA hydrolase OS=Methanococcoides burtonii (strain DSM 6242) GN=pth PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.820e-16 Identity = 44/116 (37.93%), Postives = 68/116 (58.62%), Query Frame = 3 Query: 267 DLKLVLVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 614 + K +++R DLK+ GK+A Q AHAA +SD L W++ GQ K+V+ + Q++ +L E A GL T ++ DAG T+++ G+ TVL IGP +D VTG +L+ Sbjct: 3 EYKQCIIIRDDLKLSKGKLAVQVAHAAVSAAEWASRSD---LENWKEGGQKKVVLRVEKLQDLFELKEKARREGLSTALITDAGLTEIAPGTVTVLGIGPARADYIDKVTGNLKLV 115
BLAST of CX078572 vs. ExPASy Swiss-Prot
Match: PTH_METBF (Peptidyl-tRNA hydrolase OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=pth PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.295e-16 Identity = 46/116 (39.66%), Postives = 67/116 (57.76%), Query Frame = 3 Query: 267 DLKLVLVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 614 + K +V R+DLK+ GK A Q AHAA ++D L KW++ GQ KIV+ ++ +L E A GLPT ++ DAG T++ G+ TVL IGP + L+D VT +L+ Sbjct: 3 EYKQCIVTREDLKLSKGKFAVQVAHAAISASEWASKND---LEKWKEGGQKKIVLKVPTLNDLYELKEKARREGLPTALIQDAGLTEIPPGTVTVLGIGPAKEELIDKVTRNLKLV 115 The following BLAST results are available for this feature:
BLAST of CX078572 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 51
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Sequences
The
following sequences are available for this feature:
EST sequence >CX078572 ID=CX078572; Name=CX078572; organism=Citrus sinensis; type=EST; length=796bpback to top |