CX078572
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX078572 vs. ExPASy Swiss-Prot
Match: PTH_METMA (Peptidyl-tRNA hydrolase OS=Methanosarcina mazei GN=pth PE=3 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 8.221e-16 Identity = 46/116 (39.66%), Postives = 67/116 (57.76%), Query Frame = 3 Query: 267 DLKLVLVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 614 + K +V R DLK+ GK A Q AHAA + D L KW++ GQ KIV+ + +E+ +L E A GLPT ++ DAG T++ G+ TVL IGP + L+D +T +L+ Sbjct: 3 EYKQCIVTRDDLKLSKGKFAVQVAHAALSAAEWASKGD---LEKWKEGGQKKIVLKVPSIKELYELKEKARREGLPTALIQDAGLTEIPPGTVTVLGIGPAKEELIDKITKDLKLV 115
BLAST of CX078572 vs. ExPASy Swiss-Prot
Match: PTH_HALLT (Peptidyl-tRNA hydrolase OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=pth PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.074e-15 Identity = 41/110 (37.27%), Postives = 67/110 (60.91%), Query Frame = 3 Query: 270 LKLVLVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTG 599 +K +V R D+ MG GK+A+Q AHA+ Y + + R + +KW+ GQ K+V+ ++ ++ +L + A+ G+P ++ DAG TQ+ G+ T LA+GP VD VTG Sbjct: 1 MKQAIVARTDIGMGEGKLAAQVAHASLSAYQD---AGRRVRKKWQGEGQKKVVLKGDSESQLFELADKADKEGIPYAIIRDAGHTQLEPGTVTALAVGPARDDTVDRVTG 107
BLAST of CX078572 vs. ExPASy Swiss-Prot
Match: PTH_META3 (Peptidyl-tRNA hydrolase OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=pth PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.025e-14 Identity = 36/114 (31.58%), Postives = 70/114 (61.40%), Query Frame = 3 Query: 273 KLVLVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 614 K V+++R DLKMG GK+ +Q +HA+ + +++ + ++W GQ K+V+ +++E+ +++ A G ++ DAG TQ+ +G+ T + IGP + ++ +TGK +LL Sbjct: 3 KQVIILRNDLKMGKGKLVAQGSHASLISFLNTQKNNPSVAKEWLNEGQKKVVLKVNSEKELFEVFRDANIDGFSCCLIRDAGHTQIPSGTATAVGIGPDKEEKLEKITGKLKLL 116
BLAST of CX078572 vs. ExPASy Swiss-Prot
Match: PTH_HALWD (Peptidyl-tRNA hydrolase OS=Haloquadratum walsbyi (strain DSM 16790) GN=pth PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.025e-14 Identity = 42/114 (36.84%), Postives = 66/114 (57.89%), Query Frame = 3 Query: 270 LKLVLVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRL 611 +K +V R DL+MG GK+A+Q AHA+ + ++W+ GQ KIV+ +++++ +L + AE G+P VV DAG TQ+ G+ T +AIGP +D +TG L Sbjct: 1 MKQAIVARADLRMGKGKLAAQVAHASLSAVEDTGTRSE---KQWKGGGQKKIVLKANSEKKLFQLADEAERDGIPHAVVRDAGHTQLEPGTVTCIAIGPDSDENIDRITGSLSL 111
BLAST of CX078572 vs. ExPASy Swiss-Prot
Match: PTH_METM7 (Peptidyl-tRNA hydrolase OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=pth PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.454e-14 Identity = 39/111 (35.14%), Postives = 63/111 (56.76%), Query Frame = 3 Query: 282 LVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 614 +V+R DLKMG GK+A+Q HA+ + + + W GQ K+V+ +++E+ ++++ GLP ++ DAGRTQV GS T + IGP + + VT +LL Sbjct: 6 IVIRNDLKMGKGKMAAQACHASIQAFLHAQKISSSAVSGWMNEGQKKVVLKVNSEKELLEIFKNVNIEGLPCSLIRDAGRTQVEPGSLTAVGIGPEKEEKISKVTKDLKLL 116
BLAST of CX078572 vs. ExPASy Swiss-Prot
Match: PTH_METVS (Peptidyl-tRNA hydrolase OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=pth PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.511e-14 Identity = 38/111 (34.23%), Postives = 62/111 (55.86%), Query Frame = 3 Query: 282 LVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 614 +V+R DLKMG GK+A+Q HA+ Y + + W GQ K+V+ +++E+ +++ GLP ++ DAG+TQ+ GS T + IGP + + VT +LL Sbjct: 6 IVIRNDLKMGKGKMAAQACHASIQAYLHAQKISPSAVMYWMNEGQKKVVLKVNSEKELLEIFRDVNIDGLPCSLIRDAGKTQIEPGSLTAVGIGPEKEDKISKVTKNLKLL 116
BLAST of CX078572 vs. ExPASy Swiss-Prot
Match: PTH_METM6 (Peptidyl-tRNA hydrolase OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=pth PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.511e-14 Identity = 38/111 (34.23%), Postives = 63/111 (56.76%), Query Frame = 3 Query: 282 LVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 614 +V+R DLKMG GK+A+Q HA+ + + + W GQ K+V+ +++E+ ++++ GLP ++ DAGRTQ+ GS T + IGP + + VT +LL Sbjct: 6 IVIRNDLKMGKGKMAAQACHASLQAFLHAQKISSSAVSGWMNEGQKKVVLKVNSEKELLEIFKNVNIEGLPCSLIRDAGRTQIEPGSLTAVGIGPEKEEKISKVTKDLKLL 116
BLAST of CX078572 vs. ExPASy Swiss-Prot
Match: PTH_METM5 (Peptidyl-tRNA hydrolase OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=pth PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.511e-14 Identity = 38/111 (34.23%), Postives = 63/111 (56.76%), Query Frame = 3 Query: 282 LVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 614 +V+R DLKMG GK+A+Q HA+ + + + W GQ K+V+ +++E+ ++++ GLP ++ DAGRTQ+ GS T + IGP + + VT +LL Sbjct: 6 IVIRNDLKMGKGKMAAQACHASIQAFLHAQKISSSAVSGWMNEGQKKVVLKVNSEKELLEIFKNVNIEGLPCSLIRDAGRTQIEPGSLTAVGIGPEKEEKISKVTKDLKLL 116
BLAST of CX078572 vs. ExPASy Swiss-Prot
Match: PTH_METMP (Peptidyl-tRNA hydrolase OS=Methanococcus maripaludis GN=pth PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.239e-13 Identity = 37/111 (33.33%), Postives = 62/111 (55.86%), Query Frame = 3 Query: 282 LVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 614 +V+R DLKMG GK+A+Q HA+ + + + W GQ K+V+ +++E+ ++++ GLP ++ DAGRTQ+ GS T + IGP + + V +LL Sbjct: 6 IVIRNDLKMGKGKMAAQACHASIQAFLHAQKISSSAVSGWMNEGQKKVVLKVNSEKELLEIFKNVNIEGLPCSLIRDAGRTQIEPGSLTAVGIGPEKEEKISKVKKDLKLL 116
BLAST of CX078572 vs. ExPASy Swiss-Prot
Match: V029_FOWPV (Putative peptidyl-tRNA hydrolase OS=Fowlpox virus GN=FPV029 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 9.406e-12 Identity = 40/109 (36.70%), Postives = 59/109 (54.13%), Query Frame = 3 Query: 270 LKLVLVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVT 596 LK+V V+R DLKM G+I SQC H A Y + + L++W + GQ K V N+ EM + E A G+ ++V + R + + TVL IGP P + +S+T Sbjct: 14 LKMVFVIRDDLKMTKGEIVSQCCHGAISAYEKSKKYSPDYLKRWLKNGQVKETVKVDNENEMMDIRENATAIGVNYYIVQNDKRQKCN----TVLVIGPAPNYMFESLT 118 The following BLAST results are available for this feature:
BLAST of CX078572 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 51
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Sequences
The
following sequences are available for this feature:
EST sequence >CX078572 ID=CX078572; Name=CX078572; organism=Citrus sinensis; type=EST; length=796bpback to top |