CX078571
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX078571 vs. ExPASy Swiss-Prot
Match: PTH2_YEAST (Peptidyl-tRNA hydrolase 2 OS=Saccharomyces cerevisiae GN=PTH2 PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.148e-19 Identity = 47/121 (38.84%), Postives = 76/121 (62.81%), Query Frame = -3 Query: 387 DLKLVLVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRH------LLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRL 731 ++++ LV+RQDL M GKIA+QC HAA + + + + ++W GQ KI + C ++ M++L+ A + G+ V+ DAGRTQ++AGS TVL +GP PK+++D +TG +L Sbjct: 93 EVRMALVIRQDLGMTKGKIAAQCCHAALSCFRHIATNPARASYNPIMTQRWLNAGQAKITLKCPDKFTMDELYAKAISLGVNAAVIHDAGRTQIAAGSATVLGLGPAPKAVLDQITGDLKL 213
BLAST of CX078571 vs. ExPASy Swiss-Prot
Match: PTH_HALSA (Peptidyl-tRNA hydrolase OS=Halobacterium salinarium GN=pth PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 9.716e-19 Identity = 47/110 (42.73%), Postives = 71/110 (64.55%), Query Frame = -3 Query: 399 LKLVLVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTG 728 +K V+ R D+ MG GK+A+Q AHA+ Y +D +R+W+ GQ K+VV +++E+ + E A+ GLPT +++DAGRTQ+ G+ T LAIGP P + VD +TG Sbjct: 1 MKQVIAARTDIGMGQGKLAAQVAHASLNAYE---YTDDRAVRRWKDEGQTKVVVKVGSERELYERSEEAKRAGLPTGLISDAGRTQLEPGTPTALAIGPAPDADVDQITG 107
BLAST of CX078571 vs. ExPASy Swiss-Prot
Match: PTH_HALS3 (Peptidyl-tRNA hydrolase OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=pth PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 9.716e-19 Identity = 47/110 (42.73%), Postives = 71/110 (64.55%), Query Frame = -3 Query: 399 LKLVLVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTG 728 +K V+ R D+ MG GK+A+Q AHA+ Y +D +R+W+ GQ K+VV +++E+ + E A+ GLPT +++DAGRTQ+ G+ T LAIGP P + VD +TG Sbjct: 1 MKQVIAARTDIGMGQGKLAAQVAHASLNAYE---YTDDRAVRRWKDEGQTKVVVKVGSERELYERSEEAKRAGLPTGLISDAGRTQLEPGTPTALAIGPAPDADVDQITG 107
BLAST of CX078571 vs. ExPASy Swiss-Prot
Match: PTH_METKA (Peptidyl-tRNA hydrolase OS=Methanopyrus kandleri GN=pth PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.269e-18 Identity = 49/114 (42.98%), Postives = 75/114 (65.79%), Query Frame = -3 Query: 384 KLVLVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 725 K V+VVR DLK+ GK+A+Q AHA+ G + +S + +W + GQ K+V+ CK+++E+ +L E+A+ GLP+F+V DAG T++ G+ T L IGP + +D VTG LL Sbjct: 3 KQVIVVRGDLKLSRGKLAAQVAHASLGAFLRAKESGAPV-EEWLREGQKKVVLKCKDKEELLELHELAKRRGLPSFLVRDAGLTELEPGTVTCLGIGPEREEEIDRVTGDLPLL 115
BLAST of CX078571 vs. ExPASy Swiss-Prot
Match: PTH_CALMQ (Peptidyl-tRNA hydrolase OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=pth PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.269e-18 Identity = 49/116 (42.24%), Postives = 72/116 (62.07%), Query Frame = -3 Query: 384 DLKLVLVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 731 + K +VVR DL+M GK+A Q AHAA E +++ + W GQ KIV+ + +++ +L AE+ GLPT ++ DAG T++ G+ T LAIGPGP+ LV+ VTG +LL Sbjct: 3 EFKQSIVVRGDLRMSRGKLAVQVAHAAVSAVLEALRNRGDWVNAWVSGGQKKIVLVVDSVEDLIRLKAKAESLGLPTALIEDAGLTELPPGTVTALAIGPGPEELVNKVTGSLKLL 118
BLAST of CX078571 vs. ExPASy Swiss-Prot
Match: PTH_THEON (Peptidyl-tRNA hydrolase OS=Thermococcus onnurineus (strain NA1) GN=pth PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.657e-18 Identity = 46/114 (40.35%), Postives = 71/114 (62.28%), Query Frame = -3 Query: 384 KLVLVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 725 K V+V+R+DLK+ GK+A Q AH A ++ + + W GQ K+VV +N++E+ +L AE G+PT ++ DAG T++ G+ T LA+GP P+ LVD VTG +L+ Sbjct: 5 KQVMVIRKDLKLSKGKMAVQVAHGAVTAALKVQKEKPEWFKAWFHEGQKKVVVKAENERELFELKAHAEKLGIPTALIRDAGLTEIPPGTITCLAVGPAPEELVDKVTGHLKLV 118
BLAST of CX078571 vs. ExPASy Swiss-Prot
Match: PTH_METTH (Peptidyl-tRNA hydrolase OS=Methanobacterium thermoautotrophicum GN=pth PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.657e-18 Identity = 44/115 (38.26%), Postives = 71/115 (61.74%), Query Frame = -3 Query: 384 LKLVLVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 728 +K V++VR DLKMG GKIA+Q HA+ G + +++ +RKWE G K++V+ + E+ +++ + G+ ++V DAG TQ+ AG+ T L IGP +D +TG +LL Sbjct: 1 MKQVIIVRSDLKMGKGKIAAQACHASIGSFK---RTEEDKIRKWELEGSKKVIVSVNSLDELLEIYRAVKEAGISNYLVRDAGHTQIPAGTITCLGIGPDDDEKIDKITGDLKLL 112
BLAST of CX078571 vs. ExPASy Swiss-Prot
Match: PTH2_CAEEL (Probable peptidyl-tRNA hydrolase 2 OS=Caenorhabditis elegans GN=C24G6.8 PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.692e-18 Identity = 55/130 (42.31%), Postives = 81/130 (62.31%), Query Frame = -3 Query: 384 QEQVSVSSDGDQDLKLVLVVRQDLKMGSGKIASQCAHAATGMYAELMQSD--RHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 767 +E +V S + K+VLV LKMG+GKIA+Q HA G+Y + M S+ ++ + W + GQ KIVV ++ +++ L +VA++ G ++V DAG TQ+ AGS+TVL I G VDSVTG +LL Sbjct: 188 EEMGAVQSVAGRTHKMVLVANMSLKMGTGKIAAQVGHATLGVYRQAMNSENGQNAIAAWTRHGQVKIVVKGQSTEQLMDLCKVAKDAGCYYYLVQDAGYTQIPAGSRTVLGIF-GTVEQVDSVTGGLKLL 316
BLAST of CX078571 vs. ExPASy Swiss-Prot
Match: PTH_HALMA (Peptidyl-tRNA hydrolase OS=Haloarcula marismortui GN=pth PE=3 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 1.403e-17 Identity = 47/110 (42.73%), Postives = 66/110 (60.00%), Query Frame = -3 Query: 399 LKLVLVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTG 728 +K +V R D+ MG GK+A+Q AHA+ Y + R + W+ GQ K+V+ ++ E+ +L +VAE GLP VV DAG TQ+ G+ T LA+GP LVD VTG Sbjct: 1 MKQAIVARADIGMGEGKLAAQVAHASLSAYEDAGPKPR---KAWKGAGQKKVVLKATSESELFELADVAEREGLPHAVVRDAGHTQLDPGTVTALAVGPAEDELVDRVTG 107
BLAST of CX078571 vs. ExPASy Swiss-Prot
Match: PTH_THESM (Peptidyl-tRNA hydrolase OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=pth PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 6.963e-17 Identity = 43/114 (37.72%), Postives = 69/114 (60.53%), Query Frame = -3 Query: 384 KLVLVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 725 K V++VR DLK+ GK+A Q AH A + + + W GQ K+VV ++++E+ +L AE G+P ++ DAG T++ G+ T LAIGPGP+ +V+ +TG +L+ Sbjct: 5 KQVMIVRSDLKLSKGKLAVQVAHGAVTAAFKAYKEKPEWFKGWFNEGQKKVVVKAESERELFELKAEAEKLGIPNSLIRDAGLTEIPPGTITCLAIGPGPEEIVNKITGNLKLV 118 The following BLAST results are available for this feature:
BLAST of CX078571 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 51
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Sequences
The
following sequences are available for this feature:
EST sequence >CX078571 ID=CX078571; Name=CX078571; organism=Citrus sinensis; type=EST; length=901bpback to top |