CX078562

Overview
NameCX078562
Unique NameCX078562
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length775
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX078562 vs. ExPASy Swiss-Prot
Match: PER57_ARATH (Peroxidase 57 OS=Arabidopsis thaliana GN=PER57 PE=1 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.754e-37
Identity = 95/260 (36.54%), Postives = 139/260 (53.46%), Query Frame = 2
Query:    8 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYP-----EVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYV 772
            L + FY  +CPQAE I+R  V+  +        + LR  FHDC V+ CDASLL+DST    SEK    +  +R F  I+ IK  +E  CP  VSCADI+ L+ RD V   GGP   + TGRRDGR S    L+  LP    S+S  +  F   G++    VALLG+H+VG+ +C     R+         DP+++P  V  + + C ++            D+ +P+  DN +++ I   +G++ VD +LA+D +TR  V
Sbjct:   24 LRVGFYSQSCPQAETIVRNLVRQRFGVTPTVTAALLRMHFHDCFVKGCDASLLIDSTN---SEKTAGPNGSVREFDLIDRIKAQLEAACPSTVSCADIVTLATRDSVALAGGPSYSIPTGRRDGRVSNN--LDVTLPGPTISVSGAVSLFTNKGMNTFDAVALLGAHTVGQGNCGLFSDRITSFQGTGRPDPSMDPALVTSLRNTCRNSAT-------AALDQSSPLRFDNQFFKQIRKRRGVLQVDQRLASDPQTRGIV 271          
BLAST of CX078562 vs. ExPASy Swiss-Prot
Match: PER61_ARATH (Probable peroxidase 61 OS=Arabidopsis thaliana GN=PER61 PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 6.208e-37
Identity = 95/256 (37.11%), Postives = 138/256 (53.91%), Query Frame = 2
Query:    8 LVMNFYK--DTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAI----PDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL 742
            LV ++YK  +TC  AE  IR QV+  YK   + A   LR ++ DC V  CD S+LL       SE+   ++ G+  F  I+ IK+ +E  CPGVVSCADIL L+ RD V   G P  P+ TGRRDG    A+ ++  LP  + S+   L  F + G+D   +  LLG+HS+G+THC  +V RLY      + DP +N   V  + + CP        DP  + Y+  D G+     ++YY  +L +  ++ VD +L
Sbjct:   35 LVWHYYKLTNTCDDAETYIRYQVEKFYKNDSSIAPKLLRLLYSDCMVNGCDGSILLQGPN---SERTAPQNRGLGGFVIIDKIKQVLESRCPGVVSCADILNLATRDAVHMAGAPSYPVFTGRRDGGTLNADAVD--LPSPSISVDESLAYFKSKGLDVLDMTTLLGAHSMGKTHCSYVVDRLYNFKNTGKPDPTMNTTLVSQLRYLCPPRTQKGQTDP--LVYLNPDSGSSNRFTSSYYSRVLSHNAVLRVDQEL 283          
BLAST of CX078562 vs. ExPASy Swiss-Prot
Match: PERP7_BRARA (Peroxidase P7 OS=Brassica rapa PE=1 SV=3)

HSP 1 Score: 154.066 bits (388), Expect = 8.108e-37
Identity = 91/259 (35.14%), Postives = 130/259 (50.19%), Query Frame = 2
Query:    8 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGM-RNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL----ATDKRTRPY 769
            L  NFY  +CP     ++  VK           S LR  FHDC V  CD S+LLD T     E+    +    R F  I +IK AVE+ CPGVVSCADIL ++ RD VV LGGP   +K GRRD + +        +P  + S+S ++  F+A+G+    +VAL G+H++G++ CV    R+Y E +  +N          CP A     A      D  +    DN+Y++N++  +GL+  D  L    +TD   R Y
Sbjct:    2 LTTNFYSTSCPNLLSTVKSGVKSAVSSQPRMGASILRLFFHDCFVNGCDGSILLDDTSSFTGEQNAGPNRNSARGFTVINDIKSAVEKACPGVVSCADILAIAARDSVVQLGGPNWNVKVGRRDAKTASQAAANSNIPAPSMSLSQLISSFSAVGLSTRDMVALSGAHTIGQSRCVNFRARVYNETN--INAAFATLRQRSCPRAAGSGDA-NLAPLDINSATSFDNSYFKNLMAQRGLLHSDQVLFNGGSTDSIVRGY 257          
BLAST of CX078562 vs. ExPASy Swiss-Prot
Match: PER40_ARATH (Peroxidase 40 OS=Arabidopsis thaliana GN=PER40 PE=2 SV=2)

HSP 1 Score: 154.066 bits (388), Expect = 8.108e-37
Identity = 95/265 (35.85%), Postives = 137/265 (51.70%), Query Frame = 2
Query:    8 LVMNF--YKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFG-MRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYP--EVDPALNPDH---VPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLAT-DKRTRPYVK 775
            LV++F  Y+++CP+AE I+   V+         A S LR  FHDC V  CDAS+LLD T   + EK    +   +R F  I++IK  +E  CP  VSCADIL ++ RD VV  GGP   ++ GR+D R +  +     LP  N ++S ++  F  +G+    +VAL G H++G+  C     RL P     PA + D+   +  +   C    P   +V   + D  TP   DN YY N+L  +GL+  D  LA  D  TR  V+
Sbjct:   48 LVLDFGLYRNSCPEAESIVYSWVETTVLEDPRMAASLLRLHFHDCFVNGCDASVLLDDTEGLVGEKTAPPNLNSLRGFEVIDSIKSDIESVCPETVSCADILAMAARDSVVVSGGPRWEVEVGRKDSRTASKQAATNGLPSPNSTVSTLISTFQNLGLSQTDMVALSGGHTLGKARCTSFTARLQPLQTGQPANHGDNLEFLESLQQLCSTVGP---SVGITQLDLVTPSTFDNQYYVNLLSGEGLLPSDQALAVQDPGTRAIVE 309          
BLAST of CX078562 vs. ExPASy Swiss-Prot
Match: PER6_ARATH (Peroxidase 6 OS=Arabidopsis thaliana GN=PER6 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.059e-36
Identity = 92/261 (35.25%), Postives = 138/261 (52.87%), Query Frame = 2
Query:    8 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMD--RSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDP----ALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYV 772
            L  ++Y  TCP+ E+ + + V         TA   LR  FHDC V  CDAS+L+ ST +  SE++ D  RS     F  I  IK AVE +CP +VSC+DILV + R  +  +GGP + +K GR+D   S    +E  L   N +M  ++  F + G+    +VAL+G+H++G +HC +   R++ + D      +NP +   +   C +   D +   +  ND  TP   DN YY+N+    GL+  DH +A D RTR  V
Sbjct:   22 LSSDYYTKTCPEFEETLVQIVTDKQIAAPTTAVGTLRLFFHDCMVDGCDASILVASTPRKTSERDADINRSLPGDAFDVITRIKTAVELKCPNIVSCSDILVGATRSLISMVGGPRVNVKFGRKDSLVSDMNRVEGKLARPNMTMDHIISIFESSGLTVQEMVALVGAHTIGFSHCKEFASRIFNKSDQNGPVEMNPKYAAELRKLCANYTNDEQMSAF--NDVFTPGKFDNMYYKNLKHGYGLLQSDHAIAFDNRTRSLV 280          
BLAST of CX078562 vs. ExPASy Swiss-Prot
Match: PER16_ARATH (Peroxidase 16 OS=Arabidopsis thaliana GN=PER16 PE=1 SV=2)

HSP 1 Score: 153.295 bits (386), Expect = 1.383e-36
Identity = 95/264 (35.98%), Postives = 139/264 (52.65%), Query Frame = 2
Query:    8 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEM--DRSFGMRNFRYIENIKEAVERE--CPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYV 772
            L  NFY+ +CP  E I+R  V+  +++   TA + LR  FHDC V+ CDAS+LL S     SEK+   D+S     F  +   K+A++R+  C   VSCADIL L+ RD VV  GGP  P++ GRRDGR S    ++  LP  +  +  +   FA  G+    ++AL G+H++G  HC K   R+Y       +DP LN  +   +   CP  +    A+     D  +P   DN Y++N+    GL   D  L +D+R+R  V
Sbjct:   25 LQTNFYRKSCPNVETIVRNAVRQKFQQTFVTAPATLRLFFHDCFVRGCDASILLASP----SEKDHPDDKSLAGDGFDTVAKAKQALDRDPNCRNKVSCADILALATRDVVVLTGGPNYPVELGRRDGRLSTVASVQHSLPQPSFKLDQLNTMFARHGLSQTDMIALSGAHTIGFAHCGKFSKRIYNFSPKRPIDPTLNIRYALQLRQMCPIRVDLRIAINM---DPTSPNTFDNAYFKNLQKGMGLFTSDQVLFSDERSRSTV 281          
BLAST of CX078562 vs. ExPASy Swiss-Prot
Match: PERA2_ARMRU (Peroxidase A2 OS=Armoracia rusticana GN=HRPA2 PE=1 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.359e-36
Identity = 87/247 (35.22%), Postives = 123/247 (49.80%), Query Frame = 2
Query:   20 FYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMD-RSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL 742
            FY  TCP A  I+R  ++  ++       S +R  FHDC V  CDAS+LLD +    SEK     +   R F  ++NIK A+E  CPGVVSC+DIL L+    V   GGP   +  GRRD   +        +P   + +S +  +F+A+G++   LVAL G+H+ GR  C    +RL+        DP LN   +  +   CP    +  A      D  TP   DNNY+ N+  N GL+  D +L
Sbjct:    6 FYSGTCPNASAIVRSTIQQAFQSDTRIGASLIRLHFHDCFVDGCDASILLDDSGSIQSEKNAGPNANSARGFNVVDNIKTALENTCPGVVSCSDILALASEASVSLTGGPSWTVLLGRRDSLTANLAGANSAIPSPFEGLSNITSKFSAVGLNTNDLVALSGAHTFGRARCGVFNNRLFNFSGTNGPDPTLNSTLLSSLQQLCPQ---NGSASTITNLDLSTPDAFDNNYFANLQSNNGLLQSDQEL 249          
BLAST of CX078562 vs. ExPASy Swiss-Prot
Match: PER53_ARATH (Peroxidase 53 OS=Arabidopsis thaliana GN=PER53 PE=1 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.359e-36
Identity = 88/247 (35.63%), Postives = 123/247 (49.80%), Query Frame = 2
Query:   20 FYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGM-RNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL 742
            FY  TCP A  I+R  ++   +       S +R  FHDC V  CDAS+LLD T    SEK    +    R F  ++NIK A+E  CPGVVSC+D+L L+    V   GGP   +  GRRD   +        +P   +S+S +  +F+A+G++   LVAL G+H+ GR  C    +RL+        DP LN   +  +   CP    +  A      D  TP   DNNY+ N+  N GL+  D +L
Sbjct:   36 FYSGTCPNASAIVRSTIQQALQSDTRIGASLIRLHFHDCFVNGCDASILLDDTGSIQSEKNAGPNVNSARGFNVVDNIKTALENACPGVVSCSDVLALASEASVSLAGGPSWTVLLGRRDSLTANLAGANSSIPSPIESLSNITFKFSAVGLNTNDLVALSGAHTFGRARCGVFNNRLFNFSGTGNPDPTLNSTLLSTLQQLCPQ---NGSASTITNLDLSTPDAFDNNYFANLQSNDGLLQSDQEL 279          
BLAST of CX078562 vs. ExPASy Swiss-Prot
Match: PER38_ARATH (Peroxidase 38 OS=Arabidopsis thaliana GN=PER38 PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 3.081e-36
Identity = 86/249 (34.54%), Postives = 133/249 (53.41%), Query Frame = 2
Query:   17 NFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKE-MDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGID-APGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL 742
            +FY  TCPQ  DI+   +    +     A S LR  FHDC V  CDAS+LLD+T    +EK+    +   R F  I+ +K A+E+ CP  VSCAD+L ++ ++ +V  GGP   +  GRRD  +   ++    LP  + ++  + +RF  +G+D +  LVAL G H+ G++ C  ++ RLY        DP L+  ++  +  +CP        V +   D  TP + DN YY N+ +NKGL+  D +L
Sbjct:   27 SFYDKTCPQVFDIVTNTIVNALRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFDVIDKMKAAIEKACPRTVSCADMLAIAAKESIVLAGGPSWMVPNGRRDSLRGFMDLANDNLPGPSSTLKQLKDRFKNVGLDRSSDLVALSGGHTFGKSQCQFIMDRLYNFGETGLPDPTLDKSYLATLRKQCPRNGNQSVLVDF---DLRTPTLFDNKYYVNLKENKGLIQSDQEL 272          
BLAST of CX078562 vs. ExPASy Swiss-Prot
Match: PER25_ARATH (Peroxidase 25 OS=Arabidopsis thaliana GN=PER25 PE=2 SV=2)

HSP 1 Score: 152.14 bits (383), Expect = 3.081e-36
Identity = 90/257 (35.02%), Postives = 136/257 (52.92%), Query Frame = 2
Query:   20 FYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVK 775
            +Y  +CP+AE I+R  V+  +      +   LR  FHDC VQ CD S+L+       +E+    + G+R    I++ K  +E  CPGVVSCADIL L+ RD V    GP   + TGR+DGR S A      LP   DS++V  ++F   G+D   LV LLG+H++G+T C+   +RLY        DP ++P  +  +   CP   P+    + V  D G+P   D ++++N+ D   ++  D +L +D  T   VK
Sbjct:   33 YYSTSCPKAESIVRSTVESHFDSDPTISPGLLRLHFHDCFVQGCDGSVLIKGKS---AEQAALPNLGLRGLEVIDDAKARLEAVCPGVVSCADILALAARDSVDLSDGPSWRVPTGRKDGRISLATEASN-LPSPLDSVAVQKQKFQDKGLDTHDLVTLLGAHTIGQTDCLFFRYRLYNFTVTGNSDPTISPSFLTQLKTLCP---PNGDGSKRVALDIGSPSKFDESFFKNLRDGNAILESDQRLWSDAETNAVVK 282          
The following BLAST results are available for this feature:
BLAST of CX078562 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PER57_ARATH4.754e-3736.54Peroxidase 57 OS=Arabidopsis thaliana GN=PER57 PE=... [more]
PER61_ARATH6.208e-3737.11Probable peroxidase 61 OS=Arabidopsis thaliana GN=... [more]
PERP7_BRARA8.108e-3735.14Peroxidase P7 OS=Brassica rapa PE=1 SV=3[more]
PER40_ARATH8.108e-3735.85Peroxidase 40 OS=Arabidopsis thaliana GN=PER40 PE=... [more]
PER6_ARATH1.059e-3635.25Peroxidase 6 OS=Arabidopsis thaliana GN=PER6 PE=2 ... [more]
PER16_ARATH1.383e-3635.98Peroxidase 16 OS=Arabidopsis thaliana GN=PER16 PE=... [more]
PERA2_ARMRU2.359e-3635.22Peroxidase A2 OS=Armoracia rusticana GN=HRPA2 PE=1... [more]
PER53_ARATH2.359e-3635.63Peroxidase 53 OS=Arabidopsis thaliana GN=PER53 PE=... [more]
PER38_ARATH3.081e-3634.54Peroxidase 38 OS=Arabidopsis thaliana GN=PER38 PE=... [more]
PER25_ARATH3.081e-3635.02Peroxidase 25 OS=Arabidopsis thaliana GN=PER25 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_9G08_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-9G08-M15-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX078562 ID=CX078562; Name=CX078562; organism=Citrus sinensis; type=EST; length=775bp
CCCAGGTCTTGTTATGAATTTTTACAAGGATACATGCCCTCAGGCCGAGG
ACATTATCAGGGAACAAGTTAAGCTTCTGTACAAGCGCCACAAGAACACT
GCATTTTCTTGGCTTAGAAACATTTTCCATGACTGTGCTGTCCAGTCTTG
TGATGCTTCACTGCTTCTGGACTCGACAAGAAAGACCTTGTCTGAGAAGG
AGATGGACAGGAGCTTTGGTATGAGGAACTTCAGGTACATTGAGAACATC
AAAGAAGCTGTTGAAAGAGAGTGCCCTGGTGTTGTTTCCTGTGCTGATAT
CCTTGTCCTGTCCGGTAGAGATGGCGTTGTTGCGCTTGGAGGCCCTTACA
TTCCTCTCAAGACAGGAAGAAGAGATGGTAGAAAAAGCAGAGCAGAGATA
CTTGAGCAGTATCTCCCAGATCACAATGACAGCATGTCTGTTGTTCTTGA
GAGGTTTGCAGCCATTGGCATTGACGCCCCTGGACTTGTTGCTCTGCTAG
GATCTCACAGTGTTGGCAGAACTCATTGTGTGAAGCTGGTGCACCGTCTG
TACCCAGAAGTTGACCCTGCACTGAACCCTGACCATGTTCCGCATATGCT
CCATAAGTGTCCTGATGCAATCCCAGACCCCAAGGCTGTTCAGTATGTGA
GGAATGACCGTGGCACACCCATGGTGCTGGACAACAACTACTATAGGAAC
ATATTGGACAACAAGGGCTTGATGATGGTTGATCATCAGCTAGCCACCGA
CAAGAGGACAAGACCTTATGTTAAG
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