CX078562

Overview
NameCX078562
Unique NameCX078562
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length775
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13796 contig Csv1_Contig13796:141..915. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX078562 vs. ExPASy Swiss-Prot
Match: PER1C_ARMRU (Peroxidase C1C (Fragment) OS=Armoracia rusticana GN=PRXC1C PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.997e-35
Identity = 89/252 (35.32%), Postives = 133/252 (52.78%), Query Frame = 2
Query:    8 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKE-MDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPG-LVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL 742
            L   FY ++CP   +I+R+ +    +   + A S LR  FHDC V  CDAS+LLD+T    +EK+    +   R F  ++ IK AVER CP  VSCAD+L ++ +  V   GGP   +  GRRD R++  ++    LP  + ++  +   FA +G++ P  LVAL G H+ G+  C  ++ RLY        DP LN  ++  +  +CP        V +   D  TP V DN YY N+ + KGL+  D +L
Sbjct:   11 LTPTFYDNSCPNVSNIVRDIIINELRSDPSIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFPVVDRIKAAVERACPRTVSCADVLTIAAQQSVNLAGGPSWRVPLGRRDSRQAFLDLANANLPAPSFTLPELKAAFANVGLNRPSDLVALSGGHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRQQCPRNGNQSVLVDF---DLRTPTVFDNKYYVNLKEQKGLIQSDQEL 259          
BLAST of CX078562 vs. ExPASy Swiss-Prot
Match: PER4_ARATH (Peroxidase 4 OS=Arabidopsis thaliana GN=PER4 PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.608e-35
Identity = 89/245 (36.33%), Postives = 127/245 (51.84%), Query Frame = 2
Query:   20 FYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSF-GMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY---PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL 742
            FY  TC  A   IR  ++    R +  A S +R  FHDC V  CDAS++L +T    SE++   +F   R F  I+  K AVE  CPGVVSCADI+ ++ RD    +GGP   +K GRRD   +   I ++ LP+   S++ + E F   G++   LVAL G+H++G+  C+    RLY    ++D   +         +CP    D         D+ TP   DNNYYRN++  KGL+  D  L
Sbjct:   25 FYDQTCQNALSTIRSSIRTAISRERRMAASLIRLHFHDCFVNGCDASVMLVATPTMESERDSLANFQSARGFEVIDQAKSAVESVCPGVVSCADIIAVAARDASEYVGGPRYDVKVGRRDSTNAFRAIADRDLPNFRASLNDLSELFLRKGLNTRDLVALSGAHTLGQAQCLTFKGRLYDNSSDIDAGFSSTR----KRRCPVNGGDTTLAPL---DQVTPNSFDNNYYRNLMQKKGLLESDQVL 262          
BLAST of CX078562 vs. ExPASy Swiss-Prot
Match: PER37_ARATH (Peroxidase 37 OS=Arabidopsis thaliana GN=PER37 PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.608e-35
Identity = 89/249 (35.74%), Postives = 131/249 (52.61%), Query Frame = 2
Query:   17 NFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKE-MDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGID-APGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL 742
            +FY  TCPQ  DI    +    +     A S LR  FHDC V  CDAS+LLD+T    +EK+    +   R F  I+ +K AVE+ CP  VSCAD+L ++ ++ VV  GGP   +  GRRD  +   ++    LP    +++ + +RF  +G+D A  LVAL G H+ G+  C  ++ RLY        DP L+  ++  +  +CP        V +   D  TP + DN YY N+ +NKGL+  D +L
Sbjct:   27 SFYDKTCPQVFDIATTTIVNALRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFDVIDKMKAAVEKACPKTVSCADLLAIAAQESVVLAGGPSWRVPNGRRDSLRGFMDLANDNLPAPFFTLNQLKDRFKNVGLDRASDLVALSGGHTFGKNQCQFIMDRLYNFSNTGLPDPTLDKSYLSTLRKQCPRNGNQSVLVDF---DLRTPTLFDNKYYVNLKENKGLIQSDQEL 272          
BLAST of CX078562 vs. ExPASy Swiss-Prot
Match: PER19_ARATH (Peroxidase 19 OS=Arabidopsis thaliana GN=PER19 PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 3.407e-35
Identity = 88/262 (33.59%), Postives = 137/262 (52.29%), Query Frame = 2
Query:    8 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTR--KTLSEKEMDRSFGMRN--FRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRP 766
            L  ++Y   CPQ E ++       +K    +A + +R  FHDC V+ CD S+L+++ +  K L+E+E   +  +R   F  I   K  VE  CP +VSC+DIL ++ RD +   GGPY  +K GR DG++S A+ +   +P  N ++  +++ FA+ G+    LV L GSH++G  HC   + RLY        DP+L+   +  +   CP +      V  +  D  TP V DN Y+  +  N GL+  D  L  D RT+P
Sbjct:   42 LSADYYSKKCPQLETLVGSVTSQRFKEVPISAPATIRLFFHDCFVEGCDGSILIETKKGSKKLAEREAYENKELREEGFDSIIKAKALVESHCPSLVSCSDILAIAARDFIHLAGGPYYQVKKGRWDGKRSTAKNVPPNIPRSNSTVDQLIKLFASKGLTVEELVVLSGSHTIGFAHCKNFLGRLYDYKGTKRPDPSLDQRLLKELRMSCPFSGGSSGVV--LPLDATTPFVFDNGYFTGLGTNMGLLGSDQALFLDPRTKP 301          
BLAST of CX078562 vs. ExPASy Swiss-Prot
Match: PER1B_ARMRU (Peroxidase C1B OS=Armoracia rusticana GN=PRXC1B PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.811e-35
Identity = 89/252 (35.32%), Postives = 131/252 (51.98%), Query Frame = 2
Query:    8 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKE-MDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPG-LVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL 742
            L   FY  +CP   +I+R+ +    +       S LR  FHDC V  CDAS+LLD+T   L+EK+ +  +   R F  ++ IK AVER CP  VSCAD+L ++ +  V   GGP   +  GRRD  ++  ++    LP    ++  + + FA +G+D P  LVAL G H+ G+  C  ++ RLY        DP LN  ++  +  +CP        V +   D  TP V DN YY N+ + KGL+  D +L
Sbjct:   30 LTPTFYDTSCPNVSNIVRDIIINELRSDPRITASILRLHFHDCFVNGCDASILLDNTTSFLTEKDALGNANSARGFPTVDRIKAAVERACPRTVSCADVLTIAAQQSVNLAGGPSWRVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDAFAKVGLDRPSDLVALSGGHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRQQCPLNGNQSVLVDF---DLRTPTVFDNKYYVNLKEQKGLIQSDQEL 278          
BLAST of CX078562 vs. ExPASy Swiss-Prot
Match: PER15_IPOBA (Peroxidase 15 OS=Ipomoea batatas GN=pod PE=1 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.811e-35
Identity = 89/252 (35.32%), Postives = 124/252 (49.21%), Query Frame = 2
Query:    8 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTL-SEKE-MDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL 742
            L   FY  TCP    I+R  V+   +       S +R  FHDC V  CD SLLLD+   T+ SEK+ +  +   R F  ++NIK AVE  CPGVVSC DIL L+    V   GGP   +  GRRD R +        LP   ++++ + ++F  +G++   LVAL G+H+ GR  C     RL+        DP LN  ++  +   CP              D  TP   DNNY+ N+  N+GL+  D +L
Sbjct:   25 LSSTFYSTTCPNVSAIVRTVVQQALQNDARIGGSLIRLHFHDCFVDGCDGSLLLDNNGTTIVSEKDALPNTNSTRGFDVVDNIKTAVENACPGVVSCVDILALASESSVSLAGGPSWNVLLGRRDRRTANQGGANTSLPSPFENLTNLTQKFTNVGLNVNDLVALSGAHTFGRAQCRTFSPRLFNFSNTGNPDPTLNTTYLATLQQICPQG---GSGFTVTNLDPTTPDTFDNNYFSNLQTNRGLLQSDQEL 273          
BLAST of CX078562 vs. ExPASy Swiss-Prot
Match: PER1_ARAHY (Cationic peroxidase 1 OS=Arachis hypogaea GN=PNC1 PE=1 SV=2)

HSP 1 Score: 147.517 bits (371), Expect = 7.589e-35
Identity = 94/259 (36.29%), Postives = 125/259 (48.26%), Query Frame = 2
Query:    8 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMD-RSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL----ATDKRTRPY 769
            L  NFY   CP A   I+  V     +      S LR  FHDC VQ CDAS+LLD T     EK     +  +R F  I+ IK  VE  CPGVVSCADIL ++ RD VVALGG    +  GRRD   +        LP    ++S ++  F+  G     LV L G+H++G+  C     R+Y E +  ++P +   +   CP    D     +   D  TP   DN YY N+ + KGL+  D QL    +TD +   Y
Sbjct:   24 LSSNFYATKCPNALSTIKSAVNSAVAKEARMGASLLRLHFHDCFVQGCDASVLLDDTSNFTGEKTAGPNANSIRGFEVIDTIKSQVESLCPGVVSCADILAVAARDSVVALGGASWNVLLGRRDSTTASLSSANSDLPAPFFNLSGLISAFSNKGFTTKELVTLSGAHTIGQAQCTAFRTRIYNESN--IDPTYAKSLQANCPSVGGDTNLSPF---DVTTPNKFDNAYYINLRNKKGLLHSDQQLFNGVSTDSQVTAY 277          
BLAST of CX078562 vs. ExPASy Swiss-Prot
Match: PERN_ARMRU (Peroxidase N OS=Armoracia rusticana GN=HRPN PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 9.912e-35
Identity = 91/248 (36.69%), Postives = 127/248 (51.21%), Query Frame = 2
Query:   17 NFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEK-EMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL 742
            + Y  +CP    I+R+QVK+  K     A S +R  FHDC V  CDAS+LLD T    SEK  +     +R F  I+ IK AVE  CPGVVSCADIL L+ RD V   GGP   +  GR+DG  +        LP   + +  ++ +FAA+G++   +VAL G+H+ G+  C    +RL+        D  L    +  +   CP      K       DR +    DNNY++N+L+ KGL+  D  L
Sbjct:   33 DIYAKSCPNLLQIVRDQVKIALKAEIRMAASLIRLHFHDCFVNGCDASVLLDGTN---SEKLAIPNVNSVRGFEVIDTIKAAVENACPGVVSCADILTLAARDSVYLSGGPQWRVALGRKDGLVANQSSANN-LPSPFEPLDAIIAKFAAVGLNVTDVVALSGAHTFGQAKCDLFSNRLFNFTGAGTPDSTLETTLLSDLQTVCPIGGNGNKTAPL---DRNSTDAFDNNYFKNLLEGKGLLSSDQIL 273          
BLAST of CX078562 vs. ExPASy Swiss-Prot
Match: PER10_ARATH (Peroxidase 10 OS=Arabidopsis thaliana GN=PER10 PE=1 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.295e-34
Identity = 87/260 (33.46%), Postives = 129/260 (49.62%), Query Frame = 2
Query:   20 FYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFG-MRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIP--DPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVK 775
            FY  +CP+ + I++  V   +K     A S LR  FHDC V  CD S+LL+ +     EK    +   +R F  IE+IK  +E  CP  VSCADI+ L+ R+ VV  GGP+ P+  GRRD   +  +     LP   +++  +  +F  +G+D   +V L G+H++G   C  + HRL+      + DP L       +L K  D  P  D    +    D  + +  DN YY N+++N GL+  D  L TD      VK
Sbjct:   52 FYDRSCPRLQTIVKSGVWRAFKDDSRIAASLLRLHFHDCFVNGCDGSILLNDSEDFKGEKNAQPNRNSVRGFEVIEDIKSDIESSCPLTVSCADIVALAAREAVVLTGGPFWPVPLGRRDSLTASEQAANTNLPSPFEALENITAKFVTLGLDLKDVVVLSGAHTIGFAQCFVIKHRLFNFKGSGQPDPNLAASSA--LLSKLKDTCPNVDSSDSKLAALDAASSVKFDNAYYVNLMNNIGLLDSDQTLMTDPTAAALVK 309          
BLAST of CX078562 vs. ExPASy Swiss-Prot
Match: PER47_ARATH (Peroxidase 47 OS=Arabidopsis thaliana GN=PER47 PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.691e-34
Identity = 85/256 (33.20%), Postives = 127/256 (49.61%), Query Frame = 2
Query:    5 GLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYV 772
            GL M +Y  +CP AE I++  V    +     A   +R +FHDC ++ CDAS+LLDST+   +EK+   +  +R +  I++ KE +E  CPGVVSCADI+ ++ RD V   GGPY  +  GR DG++S+ E     LP    + S +++ F   G     +VAL G+H++G   C     RL    D +L+      +   C       +     RND       DN Y+  +    G++  D  L    RTR  V
Sbjct:   25 GLSMTYYMMSCPFAEQIVKNSVNNALQADPTLAAGLIRMLFHDCFIEGCDASILLDSTKDNTAEKDSPANLSLRGYEIIDDAKEKIENRCPGVVSCADIVAMAARDAVFWAGGPYYDIPKGRFDGKRSKIEDTRN-LPSPFLNASQLIQTFGQRGFTPQDVVALSGAHTLGVARCSSFKARL-TVPDSSLDSTFANTLSKTCSAGDNAEQPFDATRND------FDNAYFNALQMKSGVLFSDQTLFNTPRTRNLV 272          
The following BLAST results are available for this feature:
BLAST of CX078562 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PER1C_ARMRU1.997e-3535.32Peroxidase C1C (Fragment) OS=Armoracia rusticana G... [more]
PER4_ARATH2.608e-3536.33Peroxidase 4 OS=Arabidopsis thaliana GN=PER4 PE=2 ... [more]
PER37_ARATH2.608e-3535.74Peroxidase 37 OS=Arabidopsis thaliana GN=PER37 PE=... [more]
PER19_ARATH3.407e-3533.59Peroxidase 19 OS=Arabidopsis thaliana GN=PER19 PE=... [more]
PER1B_ARMRU5.811e-3535.32Peroxidase C1B OS=Armoracia rusticana GN=PRXC1B PE... [more]
PER15_IPOBA5.811e-3535.32Peroxidase 15 OS=Ipomoea batatas GN=pod PE=1 SV=1[more]
PER1_ARAHY7.589e-3536.29Cationic peroxidase 1 OS=Arachis hypogaea GN=PNC1 ... [more]
PERN_ARMRU9.912e-3536.69Peroxidase N OS=Armoracia rusticana GN=HRPN PE=2 S... [more]
PER10_ARATH1.295e-3433.46Peroxidase 10 OS=Arabidopsis thaliana GN=PER10 PE=... [more]
PER47_ARATH1.691e-3433.20Peroxidase 47 OS=Arabidopsis thaliana GN=PER47 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_9G08_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-9G08-M15-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX078562 ID=CX078562; Name=CX078562; organism=Citrus sinensis; type=EST; length=775bp
CCCAGGTCTTGTTATGAATTTTTACAAGGATACATGCCCTCAGGCCGAGG
ACATTATCAGGGAACAAGTTAAGCTTCTGTACAAGCGCCACAAGAACACT
GCATTTTCTTGGCTTAGAAACATTTTCCATGACTGTGCTGTCCAGTCTTG
TGATGCTTCACTGCTTCTGGACTCGACAAGAAAGACCTTGTCTGAGAAGG
AGATGGACAGGAGCTTTGGTATGAGGAACTTCAGGTACATTGAGAACATC
AAAGAAGCTGTTGAAAGAGAGTGCCCTGGTGTTGTTTCCTGTGCTGATAT
CCTTGTCCTGTCCGGTAGAGATGGCGTTGTTGCGCTTGGAGGCCCTTACA
TTCCTCTCAAGACAGGAAGAAGAGATGGTAGAAAAAGCAGAGCAGAGATA
CTTGAGCAGTATCTCCCAGATCACAATGACAGCATGTCTGTTGTTCTTGA
GAGGTTTGCAGCCATTGGCATTGACGCCCCTGGACTTGTTGCTCTGCTAG
GATCTCACAGTGTTGGCAGAACTCATTGTGTGAAGCTGGTGCACCGTCTG
TACCCAGAAGTTGACCCTGCACTGAACCCTGACCATGTTCCGCATATGCT
CCATAAGTGTCCTGATGCAATCCCAGACCCCAAGGCTGTTCAGTATGTGA
GGAATGACCGTGGCACACCCATGGTGCTGGACAACAACTACTATAGGAAC
ATATTGGACAACAAGGGCTTGATGATGGTTGATCATCAGCTAGCCACCGA
CAAGAGGACAAGACCTTATGTTAAG
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