CX078562

Overview
NameCX078562
Unique NameCX078562
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length775
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13796 contig Csv1_Contig13796:141..915. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX078562 vs. ExPASy Swiss-Prot
Match: PER66_MAIZE (Peroxidase 66 OS=Zea mays GN=PER66 PE=1 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 5.439e-33
Identity = 92/258 (35.66%), Postives = 125/258 (48.45%), Query Frame = 2
Query:    8 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL----ATDKRTRPY 769
            L   FY  +CP A   IR  V    ++      S LR  FHDC V+ CDASLLL+ T    S+   + +   R F  + +IK  VE  CPG+VSCADIL ++ RDGVVALGGP   +  GRRD   S A      LP    S+  +L  +    ++   +VAL G+H++G+  C      +Y   D  +N      +   CP A     +      D  TP   DN YY N+L  KGL+  D +L    +TD   R +
Sbjct:   31 LSSTFYDRSCPNALSTIRSGVNSAVRQEPRVGASLLRLHFHDCFVRGCDASLLLNDTSGEQSQGP-NLTLNPRGFVVVNSIKAQVESVCPGIVSCADILAVAARDGVVALGGPSWTVLLGRRDSTASFAGQTSD-LPPPTSSLGQLLSAYNKKNLNPTDMVALSGAHTIGQAQCSSFNDHIYN--DTNINSAFAASLRANCPRA----GSTALAPLDTTTPNAFDNAYYTNLLSQKGLLHSDQELFNSGSTDSTVRSF 280          
BLAST of CX078562 vs. ExPASy Swiss-Prot
Match: PER59_ARATH (Peroxidase 59 OS=Arabidopsis thaliana GN=PER59 PE=1 SV=2)

HSP 1 Score: 141.354 bits (355), Expect = 5.439e-33
Identity = 91/252 (36.11%), Postives = 125/252 (49.60%), Query Frame = 2
Query:   17 NFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEK-EMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCP----DAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL 742
            + Y  +CP    I+R+QV +  K     A S +R  FHDC V  CDASLLLD      SEK  +      R F  I+ IK AVE  CPGVVSCADIL L+ RD VV  GGP   +  GR+DG  +        LP   + +  ++ +F A+ ++   +VAL G+H+ G+  C    +RL+        D  L    + ++   CP      I  P        DR T    DNNY++N+L+ KGL+  D  L
Sbjct:   33 DIYAKSCPNLVQIVRKQVAIALKAEIRMAASLIRLHFHDCFVNGCDASLLLDGAD---SEKLAIPNINSARGFEVIDTIKAAVENACPGVVSCADILTLAARDSVVLSGGPGWRVALGRKDGLVANQNSANN-LPSPFEPLDAIIAKFVAVNLNITDVVALSGAHTFGQAKCAVFSNRLFNFTGLGNPDATLETSLLSNLQTVCPLGGNSNITAPL-------DRSTTDTFDNNYFKNLLEGKGLLSSDQIL 273          
BLAST of CX078562 vs. ExPASy Swiss-Prot
Match: PER70_MAIZE (Peroxidase 70 OS=Zea mays GN=PER70 PE=1 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 7.103e-33
Identity = 92/255 (36.08%), Postives = 123/255 (48.24%), Query Frame = 2
Query:   20 FYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFG-MRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL----ATDKRTRPY 769
            FY  +CP+A   I+  V     +      S LR  FHDC VQ CD S+LL+ T     E+  + + G +R F  ++NIK  VE  CPGVVSCADIL ++ RD VVALGGP   +  GRRD   +   +    LP  +  ++ +   FA   +    LVAL G+H++G   C      +Y   D  +N          CP A  +         D  TP   DN YY N+L  +GL+  D QL    ATD   R Y
Sbjct:   31 FYSRSCPRALATIKAAVTAAVAQEARMGASLLRLHFHDCFVQGCDGSVLLNDTATFTGEQTANPNVGSIRGFGVVDNIKAQVEAVCPGVVSCADILAVAARDSVVALGGPSWRVLLGRRDSTTASLALANSDLPAPSLDLANLTAAFAKKRLSRTDLVALSGAHTIGLAQCKNFRAHIYN--DTNVNAAFATLRRANCPAAAGNGDG-NLAPLDTATPTAFDNAYYTNLLAQRGLLHSDQQLFNGGATDGLVRTY 282          
BLAST of CX078562 vs. ExPASy Swiss-Prot
Match: PER3_ARMRU (Peroxidase C3 OS=Armoracia rusticana GN=PRXC3 PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 7.103e-33
Identity = 85/249 (34.14%), Postives = 131/249 (52.61%), Query Frame = 2
Query:   17 NFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEM-DRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPG-LVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL 742
            +FY  TCP   +II + +    +     A S LR  FHDC V+ CDAS+LLD++    +EK+    +   R F  I+ +K ++ER CP  VSCAD+L ++ +  V+  GGP+ P+  GRRD  ++  ++    LP    +++ + + FA +G++ P  LVAL G H+ GR  C  +  RLY        DP L+P ++  +   CP    +      V  D  TP   D  YY N+ + KGL+  D +L
Sbjct:   34 DFYFRTCPSVFNIIGDIIVDELRTDPRIAASLLRLHFHDCFVRGCDASILLDNSTSFRTEKDAAPNANSARGFGVIDRMKTSLERACPRTVSCADVLTIASQISVLLSGGPWWPVPLGRRDSVEAFFDLANTALPSPFFTLAQLKKAFADVGLNRPSDLVALSGGHTFGRAQCQFVTPRLYNFNGTNRPDPTLDPTYLVQLRALCPQ---NGNGTVLVNFDVVTPNTFDRQYYTNLRNGKGLIQSDQEL 279          
BLAST of CX078562 vs. ExPASy Swiss-Prot
Match: PER13_ARATH (Peroxidase 13 OS=Arabidopsis thaliana GN=PER13 PE=1 SV=2)

HSP 1 Score: 140.969 bits (354), Expect = 7.103e-33
Identity = 85/256 (33.20%), Postives = 130/256 (50.78%), Query Frame = 2
Query:    8 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVAL-LGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYV 772
            L   FY +TCP AE I+R+ V+         A   LR  FHDC V+ CD S+L+        E+    + G+  F  I+  K  +ER CPGVVSCADI+ L+ RD +    GP+  + TGRRDG  +  +  +  LPD  DS++ +  +F   G+    LV L  G+H++G T C  ++ RL  + DP +NP+    +  KCP           +  D  +  V DN  ++NI + +G+++ D  L  D   +  +
Sbjct:   24 LQFGFYSETCPSAESIVRDVVQQAVTNDPGKAAVLLRLQFHDCFVEGCDGSILIKHGGND-DERFAAGNAGVAGFDVIDEAKSELERFCPGVVSCADIVALAARDAIAEAKGPFYEVPTGRRDGLIANVDHAKN-LPDVQDSINTLKSKFREKGLSDQDLVLLSAGAHTIGTTACFFVIPRLDAQ-DPTINPEFFQILRSKCPQG---GDVNVRIPLDWDSQFVFDNQIFQNIKNGRGVILSDSVLYQDNNMKKII 273          
BLAST of CX078562 vs. ExPASy Swiss-Prot
Match: PER42_MAIZE (Peroxidase 42 OS=Zea mays GN=PER42 PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 9.277e-33
Identity = 89/251 (35.46%), Postives = 123/251 (49.00%), Query Frame = 2
Query:    8 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRT 760
            L   FY  +CP A   I   V     +      S LR  FHDC +Q CDAS+LL+ T    ++   + +   R F  + +IK  VE  CPGVVSCADIL ++ RDGVVALGGP   +  GRRD   S        LP    S+  +L  ++   +DA  +VAL G+H++G+  C      +Y   D  +N      +   CP +     A      D  TP V  N+YY+N+L  KGL+  D +L  +  T
Sbjct:   31 LSSTFYDTSCPSAMSTISSGVNSAVAQQARVGASLLRLHFHDCFIQGCDASILLNDTSGEQTQPP-NLTLNPRAFDVVNSIKAQVEAACPGVVSCADILAVAARDGVVALGGPSWTVLLGRRDSTGSFPSQTSD-LPPPTSSLQALLAAYSKKNLDATDMVALSGAHTIGQAQCSSFNGHIYN--DTNINAAFATSLKANCPMSGGSSLAPL----DTMTPTVFGNDYYKNLLSQKGLLHSDQELFNNGST 273          
BLAST of CX078562 vs. ExPASy Swiss-Prot
Match: PER32_ARATH (Peroxidase 32 OS=Arabidopsis thaliana GN=PER32 PE=1 SV=3)

HSP 1 Score: 140.198 bits (352), Expect = 1.212e-32
Identity = 89/252 (35.32%), Postives = 126/252 (50.00%), Query Frame = 2
Query:    8 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEM-DRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPG-LVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL 742
            L   FY +TCP    I+R+ +    +     A S LR  FHDC V  CDAS+LLD+T    +EK+    +   R F  I+ +K AVE  CP  VSCADIL ++ +  V   GGP   +  GRRD  ++   +    LP    ++  +   F  +G+D P  LVAL G H+ G+  C  ++ RLY        DP LN  ++  +  +CP        V +   D  TP V DN YY N+ + KGL+  D +L
Sbjct:   31 LTPTFYDNTCPSVFTIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAAPNANSARGFPVIDRMKAAVETACPRTVSCADILTIAAQQAVNLAGGPSWRVPLGRRDSLQAFFALANTNLPAPFFTLPQLKASFQNVGLDRPSDLVALSGGHTFGKNQCQFIMDRLYNFSNTGLPDPTLNTTYLQTLRGQCPRNGNQTVLVDF---DLRTPTVFDNKYYVNLKELKGLIQTDQEL 279          
BLAST of CX078562 vs. ExPASy Swiss-Prot
Match: PER2_MAIZE (Peroxidase 2 OS=Zea mays GN=PER2 PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.582e-32
Identity = 90/263 (34.22%), Postives = 134/263 (50.95%), Query Frame = 2
Query:    8 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDST--RKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDG--VVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLV-HRLYPEVDPALNPDHVPHMLHKCP---DAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYV 772
            L + +Y+ TCPQAE I++  ++    ++     + +R +FHDC V+ CDAS+LLD T    T  +     +  +R F  I+ IK+A+E  CPGVVSCADI+  + RD    ++ G     + +GR DG  S A    ++L     ++S +   FA  G+    LV L G+H+VGR+HC   V  RL  +V   +NP     +  +CP       DP  +Q    D  TP  +D  YY+N+L +  L   D  L T   T   V
Sbjct:   35 LELGYYRYTCPQAEAIVKASMEKAIAQNPGNGAAVIRMLFHDCFVEGCDASVLLDPTPFSPTPEKLAAPNNPSLRGFELIDAIKDALEAACPGVVSCADIIAFAARDASCFLSQGKVSFDMPSGRLDGTFSNASESVKFLVPPTSNLSDLASSFAVKGMSLEDLVVLSGAHTVGRSHCSSFVSDRL--DVPSDINPALAAFLRTRCPPNTTTSDDPTVMQ----DVVTPNAMDIQYYKNVLSHTVLFTSDAALLTSPETAKLV 291          
BLAST of CX078562 vs. ExPASy Swiss-Prot
Match: PER58_ARATH (Peroxidase 58 OS=Arabidopsis thaliana GN=PER58 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 6.013e-32
Identity = 83/254 (32.68%), Postives = 128/254 (50.39%), Query Frame = 2
Query:    8 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRK--TLSEKEMDRSFG-MRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY------PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL 742
            L  +FY  TCP    I R  ++   +         +R  FHDC V  CD S+LLD+        EKE  ++ G +  F  I++IK A+E  CPGVVSCADIL ++    V   GGP + +  GRRDGR +        LP   DS+ ++  +F+   +D   LVAL G+H+ GR  C  + +RL+       + DP++ P+ +  +  +CP              D  +P   DN+Y++N+ +N+G++  D  L
Sbjct:   25 LTSDFYSTTCPNVTAIARGLIERASRNDVRLTAKVMRLHFHDCFVNGCDGSVLLDAAPADGVEGEKEAFQNAGSLDGFEVIDDIKTALENVCPGVVSCADILAIAAEISVALAGGPSLDVLLGRRDGRTAIRADAVAALPLGPDSLEILTSKFSVHNLDTTDLVALSGAHTFGRVQCGVINNRLHNFSGNSGQSDPSIEPEFLQTLRRQCPQG---GDLTARANLDPTSPDSFDNDYFKNLQNNRGVIESDQIL 275          
BLAST of CX078562 vs. ExPASy Swiss-Prot
Match: PER68_ARATH (Peroxidase 68 OS=Arabidopsis thaliana GN=PER68 PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 7.854e-32
Identity = 84/244 (34.43%), Postives = 124/244 (50.82%), Query Frame = 2
Query:   17 NFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMD-RSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDG-RKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL 742
            +FY D+CP     +R  V+    + +  A S LR  FHDC V  CDAS+LLD TR  L EK     +  +R +  I+ IK  VER CPGVVSCADIL ++ RD V+ +GG    +K GRRD    S +      LP    ++  ++  F A G+    +VAL G+H++G+  CV    R+Y   +  ++          CP A         +  D  TP   D +Y+  +++++GL+  D  L
Sbjct:   33 DFYSDSCPSLLPTVRRVVQREVAKERRIAASLLRLFFHDCFVNGCDASILLDDTRSFLGEKTAGPNNNSVRGYEVIDAIKSRVERLCPGVVSCADILAITARDSVLLMGGRGWSVKLGRRDSITASFSTANSGVLPPPTSTLDNLINLFRANGLSPRDMVALSGAHTIGQARCVTFRSRIYNSTN--IDLSFALSRRRSCPAATGSGDNNAAIL-DLRTPEKFDGSYFMQLVNHRGLLTSDQVL 273          
The following BLAST results are available for this feature:
BLAST of CX078562 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PER66_MAIZE5.439e-3335.66Peroxidase 66 OS=Zea mays GN=PER66 PE=1 SV=1[more]
PER59_ARATH5.439e-3336.11Peroxidase 59 OS=Arabidopsis thaliana GN=PER59 PE=... [more]
PER70_MAIZE7.103e-3336.08Peroxidase 70 OS=Zea mays GN=PER70 PE=1 SV=1[more]
PER3_ARMRU7.103e-3334.14Peroxidase C3 OS=Armoracia rusticana GN=PRXC3 PE=3... [more]
PER13_ARATH7.103e-3333.20Peroxidase 13 OS=Arabidopsis thaliana GN=PER13 PE=... [more]
PER42_MAIZE9.277e-3335.46Peroxidase 42 OS=Zea mays GN=PER42 PE=2 SV=1[more]
PER32_ARATH1.212e-3235.32Peroxidase 32 OS=Arabidopsis thaliana GN=PER32 PE=... [more]
PER2_MAIZE1.582e-3234.22Peroxidase 2 OS=Zea mays GN=PER2 PE=2 SV=1[more]
PER58_ARATH6.013e-3232.68Peroxidase 58 OS=Arabidopsis thaliana GN=PER58 PE=... [more]
PER68_ARATH7.854e-3234.43Peroxidase 68 OS=Arabidopsis thaliana GN=PER68 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_9G08_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-9G08-M15-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX078562 ID=CX078562; Name=CX078562; organism=Citrus sinensis; type=EST; length=775bp
CCCAGGTCTTGTTATGAATTTTTACAAGGATACATGCCCTCAGGCCGAGG
ACATTATCAGGGAACAAGTTAAGCTTCTGTACAAGCGCCACAAGAACACT
GCATTTTCTTGGCTTAGAAACATTTTCCATGACTGTGCTGTCCAGTCTTG
TGATGCTTCACTGCTTCTGGACTCGACAAGAAAGACCTTGTCTGAGAAGG
AGATGGACAGGAGCTTTGGTATGAGGAACTTCAGGTACATTGAGAACATC
AAAGAAGCTGTTGAAAGAGAGTGCCCTGGTGTTGTTTCCTGTGCTGATAT
CCTTGTCCTGTCCGGTAGAGATGGCGTTGTTGCGCTTGGAGGCCCTTACA
TTCCTCTCAAGACAGGAAGAAGAGATGGTAGAAAAAGCAGAGCAGAGATA
CTTGAGCAGTATCTCCCAGATCACAATGACAGCATGTCTGTTGTTCTTGA
GAGGTTTGCAGCCATTGGCATTGACGCCCCTGGACTTGTTGCTCTGCTAG
GATCTCACAGTGTTGGCAGAACTCATTGTGTGAAGCTGGTGCACCGTCTG
TACCCAGAAGTTGACCCTGCACTGAACCCTGACCATGTTCCGCATATGCT
CCATAAGTGTCCTGATGCAATCCCAGACCCCAAGGCTGTTCAGTATGTGA
GGAATGACCGTGGCACACCCATGGTGCTGGACAACAACTACTATAGGAAC
ATATTGGACAACAAGGGCTTGATGATGGTTGATCATCAGCTAGCCACCGA
CAAGAGGACAAGACCTTATGTTAAG
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