CX078562

Overview
NameCX078562
Unique NameCX078562
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length775
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13796 contig Csv1_Contig13796:141..915. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX078562 vs. ExPASy Swiss-Prot
Match: PER9_ARATH (Peroxidase 9 OS=Arabidopsis thaliana GN=PER9 PE=1 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.026e-31
Identity = 86/253 (33.99%), Postives = 121/253 (47.83%), Query Frame = 2
Query:    8 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMD-RSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLAT 748
            L   FY+ +CPQA++I+   ++    +    A S LR  FHDC VQ CDAS+LLD +    SEK        +R F+ I+ IK  +E+ CP  VSCADIL L+ R   +  GGP   L  GRRD R +        +P  N ++  +L  F   G++   LV+L G H++G   C     RLY      + D  L   +   +   CP    D         D  +P   DN Y++ +L  KGL+  D  L T
Sbjct:   45 LYPQFYQFSCPQADEIVMTVLEKAIAKEPRMAASLLRLHFHDCFVQGCDASILLDDSATIRSEKNAGPNKNSVRGFQVIDEIKAKLEQACPQTVSCADILALAARGSTILSGGPSWELPLGRRDSRTASLNGANTNIPAPNSTIQNLLTMFQRKGLNEEDLVSLSGGHTIGVARCTTFKQRLYNQNGNNQPDETLERSYYYGLRSICPPTGGDNNISPL---DLASPARFDNTYFKLLLWGKGLLTSDEVLLT 294          
BLAST of CX078562 vs. ExPASy Swiss-Prot
Match: PER70_ARATH (Peroxidase 70 OS=Arabidopsis thaliana GN=PER70 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.026e-31
Identity = 92/258 (35.66%), Postives = 125/258 (48.45%), Query Frame = 2
Query:   20 FYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCP-DAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVK 775
            +Y   C   E I+R  V+  Y  +   A   LR  FHDC VQ CDAS+LL       SE+    +  +R F  IE  K  +E  CP  VSCADIL L+ RD V   GGP+ P+  GR DGR S A      LP   DS++V   RFA   ++   LV L   H++G   C+    R +        DP + P  VP +  +CP +  P  + V     D G+    D +Y  N+ + +GL+  D  L T+  TRP V+
Sbjct:   38 YYGSACWNVESIVRSVVESNYLANPANAPGILRMHFHDCFVQGCDASVLLAGPN---SERTAIPNLSLRGFNVIEEAKTQLEIACPRTVSCADILALAARDFVHLAGGPWWPVPLGRLDGRISLAS--NVILPGPTDSVAVQKLRFAEKNLNTQDLVVLAAGHTIGTAGCIVFRDRFFNYDNTGSPDPTIAPSFVPLIQAQCPLNGDPATRVVL----DTGSGDQFDTSYLNNLKNGRGLLESDQVLWTNLETRPIVE 286          
BLAST of CX078562 vs. ExPASy Swiss-Prot
Match: PER2_CUCSA (Peroxidase 2 (Fragment) OS=Cucumis sativus PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.026e-31
Identity = 79/242 (32.64%), Postives = 118/242 (48.76%), Query Frame = 2
Query:   20 FYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRL-YPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL 742
            FY ++CP   +I+R  V+      +      +R  FHDC V  CD S+LL+     +SE     +  +  F  + NIK AVE+ CPGVVSCADIL ++    V   GGP   ++ GRRD R++  +     LP   ++++ +  +F  + +D+  LVAL G+H+ G++ C     RL     D  LNP +   +   C           +V  D  TP   D NYY N+  N G +  D  L
Sbjct:    2 FYDESCPDVSNIVRRVVQQALVSDERAGARLIRLHFHDCFVNGCDGSVLLEDQPGVVSELAAPGNANITGFNIVNNIKAAVEKACPGVVSCADILAIASVGSVNLAGGPCWEVQLGRRDSRRANLQGAIDGLPSPFENVTQLKRKFDRVDLDSTDLVALSGAHTFGKSRCQFFDRRLNVSNPDSTLNPRYAQQLRQACSSG-----RDTFVNLDPTTPNKFDKNYYTNLQSNTGPLTSDQVL 238          
BLAST of CX078562 vs. ExPASy Swiss-Prot
Match: PER60_ARATH (Peroxidase 60 OS=Arabidopsis thaliana GN=PER60 PE=1 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.340e-31
Identity = 85/262 (32.44%), Postives = 138/262 (52.67%), Query Frame = 2
Query:    8 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGG--PYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYV 772
            L + FY   C   E+I+ + V   + +  + A + +R  FHDC    CDASLLLD +    SEK+   +  +R +  I++IK AVE+EC  VVSCADI+ L+ RD V    G      + TGR DG+ S A +++  LP    +++    +F    +    +V LLG H++G THC  ++ RLY      + DP+++P  V  +  KCP +      +   +N   +   +D ++Y+ I  ++G++ +D +LA D  T   V
Sbjct:   28 LRLGFYSQNCQNVENIVSKVVGEAFIKDSSIAPAMIRLYFHDCFSNGCDASLLLDGSN---SEKKASPNLSVRGYEVIDDIKSAVEKECDRVVSCADIIALATRDLVTLASGGKTRYEIPTGRLDGKISSALLVD--LPSPKMTVAETAAKFDQRKLSLNDMVLLLGGHTIGVTHCSFIMDRLYNFQNTQKPDPSMDPKLVEELSAKCPKSSSTDGIISLDQNATSS-NTMDVSFYKEIKVSRGVLHIDQKLAIDDLTSKMV 283          
BLAST of CX078562 vs. ExPASy Swiss-Prot
Match: PER2_ORYSJ (Peroxidase 2 OS=Oryza sativa subsp. japonica GN=PRX112 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.340e-31
Identity = 86/258 (33.33%), Postives = 121/258 (46.90%), Query Frame = 2
Query:    8 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL----ATDKRTRPY 769
            L   FY  +CP A   I+  V            S +R  FHDC VQ CDAS+LL    +         +  +R F  ++NIK  VE  C   VSCADIL ++ RD VVALGGP   +  GRRD   +        LP  + S++ ++  F+  G+D   +VAL G+H++G+  C     RLY E +  ++      +   CP       +      D  TP   D+ YY N+L NKGL+  D  L    +TD   R +
Sbjct:   25 LSATFYDTSCPNALSTIKSAVTAAVNSEPRMGASLVRLHFHDCFVQGCDASVLLSGQEQNAGPN----AGSLRGFNVVDNIKTQVEAICSQTVSCADILAVAARDSVVALGGPSWTVLLGRRDSTTANESQANTDLPAPSSSLAELIGNFSRKGLDVTDMVALSGAHTIGQAQCQNFRDRLYNETN--IDSSFATALKANCPRPTGSGDS-NLAPLDTTTPNAFDSAYYTNLLSNKGLLHSDQVLFNGGSTDNTVRNF 275          
BLAST of CX078562 vs. ExPASy Swiss-Prot
Match: PER2_ORYSI (Peroxidase 2 OS=Oryza sativa subsp. indica GN=PRX112 PE=3 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 1.340e-31
Identity = 86/258 (33.33%), Postives = 121/258 (46.90%), Query Frame = 2
Query:    8 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL----ATDKRTRPY 769
            L   FY  +CP A   I+  V            S +R  FHDC VQ CDAS+LL    +         +  +R F  ++NIK  VE  C   VSCADIL ++ RD VVALGGP   +  GRRD   +        LP  + S++ ++  F+  G+D   +VAL G+H++G+  C     RLY E +  ++      +   CP       +      D  TP   D+ YY N+L NKGL+  D  L    +TD   R +
Sbjct:   25 LSATFYDTSCPNALSTIKSAVTAAVNSEPRMGASLVRLHFHDCFVQGCDASVLLSGQEQNAGPN----AGSLRGFNVVDNIKTQVEAICSQTVSCADILAVAARDSVVALGGPSWTVLLGRRDSTTANESQANTDLPAPSSSLAELIGNFSRKGLDVTDMVALSGAHTIGQAQCQNFRDRLYNETN--IDSSFATALKANCPRPTGSGDS-NLAPLDTTTPNAFDSAYYTNLLSNKGLLHSDQVLFNGGSTDNTVRNF 275          
BLAST of CX078562 vs. ExPASy Swiss-Prot
Match: PER1A_ARMRU (Peroxidase C1A OS=Armoracia rusticana GN=PRXC1A PE=1 SV=2)

HSP 1 Score: 136.346 bits (342), Expect = 1.750e-31
Identity = 84/252 (33.33%), Postives = 128/252 (50.79%), Query Frame = 2
Query:    8 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKE-MDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGID-APGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL 742
            L   FY ++CP   +I+R+ +    +     A S LR  FHDC V  CDAS+LLD+T    +EK+    +   R F  I+ +K AVE  CP  VSCAD+L ++ +  V   GGP   +  GRRD  ++  ++    LP    ++  + + F  +G++ +  LVAL G H+ G+  C  ++ RLY        DP LN  ++  +   CP    +      V  D  TP + DN YY N+ + KGL+  D +L
Sbjct:   32 LTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRGLCP---LNGNLSALVDFDLRTPTIFDNKYYVNLEEQKGLIQSDQEL 280          
BLAST of CX078562 vs. ExPASy Swiss-Prot
Match: PERX_TOBAC (Lignin-forming anionic peroxidase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 8.683e-31
Identity = 83/251 (33.07%), Postives = 122/251 (48.61%), Query Frame = 2
Query:    8 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPD------HVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL 742
            L   FY  TCP    I+R  +    +         +R  FHDC V  CD S+LLD T  T +EK+   + G   F  +++IK A+E  CPGVVSCADIL L+   GVV   GP   +  GR+D   +        +P   ++++V++ +F   G+D   LVAL G+H+ GR  C     RL+   + + NPD       +  +   CP          +   D  TP   DN+Y+ N+  N+GL+  D +L
Sbjct:   24 LSATFYDTTCPNVTSIVRGVMDQRQRTDARAGAKIIRLHFHDCFVNGCDGSILLD-TDGTQTEKDAPANVGAGGFDIVDDIKTALENVCPGVVSCADILALASEIGVVLAKGPSWQVLFGRKDSLTANRSGANSDIPSPFETLAVMIPQFTNKGMDLTDLVALSGAHTFGRARCGTFEQRLF-NFNGSGNPDLTVDATFLQTLQGICPQG--GNNGNTFTNLDISTPNDFDNDYFTNLQSNQGLLQTDQEL 270          
BLAST of CX078562 vs. ExPASy Swiss-Prot
Match: PER1_MAIZE (Peroxidase 1 OS=Zea mays GN=PER1 PE=1 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 7.351e-30
Identity = 85/257 (33.07%), Postives = 124/257 (48.25%), Query Frame = 2
Query:    8 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMD---RSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRA-EILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPE--------VDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQL 742
            L + FY  +CP AE ++R+ V   + +    A   +R  FHDC V+ CD S+LL +      + E D    +  +R F  I+  K AVE+ CP  VSCADI+  + RD +   G     +  GRRDGR S A E ++  LP    +   + + F A  +    +V L G+H+VGR+ C     R++          VD  L+P +   +   CP        +     D GTP VLDNNYY+ +    GL   D+QL
Sbjct:   35 LRVGFYDTSCPNAEALVRQAVAAAFAKDAGIAAGLIRLHFHDCFVRGCDGSVLL-TVNPGGGQTERDALPNNPSLRGFDVIDAAKTAVEQSCPRTVSCADIVAFAARDSISLTGSVSYQVPAGRRDGRVSNATETVD--LPPPTSTAQSLTDLFKAKELSVEDMVVLSGAHTVGRSFCASFFKRVWNTSTNPATAIVDAGLSPSYAQLLRALCPSNTTQTTPIT-TAMDPGTPNVLDNNYYKLLPRGMGLFFSDNQL 287          
BLAST of CX078562 vs. ExPASy Swiss-Prot
Match: PER1_HORVU (Peroxidase 1 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 4.033e-28
Identity = 81/248 (32.66%), Postives = 115/248 (46.37%), Query Frame = 2
Query:   20 FYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAI-GIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRT 760
            FY  +CP+A   I+  V            S LR  FHDC VQ CDAS+LL      + +  +  +  +R F  I++IK  +E  C   VSCADIL ++ RD VVALGGP   +  GRRD   +        LP  N S + +   F    G++   +VAL G+H++G+  C     R+Y   D  +N  +   +   CP  +           D  T    DN YY N++  KGL+  D  L  +  T
Sbjct:   27 FYDTSCPRALATIKSGVMAAVTSDPRMGASLLRLHFHDCFVQGCDASVLLSG----MEQNAIPNAGSLRGFGVIDSIKTQIEAICKQTVSCADILTVAARDSVVALGGPSWTVPLGRRDSIDANENEANTDLPGFNSSRAELEAAFLKKGGLNTVDMVALSGAHTIGQAQCSTFRARIYGG-DTNINAAYAASLRANCPQTVGSGDG-SLANLDTTTANTFDNAYYTNLMSQKGLLHSDQVLFNNDTT 268          
The following BLAST results are available for this feature:
BLAST of CX078562 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PER9_ARATH1.026e-3133.99Peroxidase 9 OS=Arabidopsis thaliana GN=PER9 PE=1 ... [more]
PER70_ARATH1.026e-3135.66Peroxidase 70 OS=Arabidopsis thaliana GN=PER70 PE=... [more]
PER2_CUCSA1.026e-3132.64Peroxidase 2 (Fragment) OS=Cucumis sativus PE=2 SV... [more]
PER60_ARATH1.340e-3132.44Peroxidase 60 OS=Arabidopsis thaliana GN=PER60 PE=... [more]
PER2_ORYSJ1.340e-3133.33Peroxidase 2 OS=Oryza sativa subsp. japonica GN=PR... [more]
PER2_ORYSI1.340e-3133.33Peroxidase 2 OS=Oryza sativa subsp. indica GN=PRX1... [more]
PER1A_ARMRU1.750e-3133.33Peroxidase C1A OS=Armoracia rusticana GN=PRXC1A PE... [more]
PERX_TOBAC8.683e-3133.07Lignin-forming anionic peroxidase OS=Nicotiana tab... [more]
PER1_MAIZE7.351e-3033.07Peroxidase 1 OS=Zea mays GN=PER1 PE=1 SV=1[more]
PER1_HORVU4.033e-2832.66Peroxidase 1 OS=Hordeum vulgare PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_9G08_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-9G08-M15-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX078562 ID=CX078562; Name=CX078562; organism=Citrus sinensis; type=EST; length=775bp
CCCAGGTCTTGTTATGAATTTTTACAAGGATACATGCCCTCAGGCCGAGG
ACATTATCAGGGAACAAGTTAAGCTTCTGTACAAGCGCCACAAGAACACT
GCATTTTCTTGGCTTAGAAACATTTTCCATGACTGTGCTGTCCAGTCTTG
TGATGCTTCACTGCTTCTGGACTCGACAAGAAAGACCTTGTCTGAGAAGG
AGATGGACAGGAGCTTTGGTATGAGGAACTTCAGGTACATTGAGAACATC
AAAGAAGCTGTTGAAAGAGAGTGCCCTGGTGTTGTTTCCTGTGCTGATAT
CCTTGTCCTGTCCGGTAGAGATGGCGTTGTTGCGCTTGGAGGCCCTTACA
TTCCTCTCAAGACAGGAAGAAGAGATGGTAGAAAAAGCAGAGCAGAGATA
CTTGAGCAGTATCTCCCAGATCACAATGACAGCATGTCTGTTGTTCTTGA
GAGGTTTGCAGCCATTGGCATTGACGCCCCTGGACTTGTTGCTCTGCTAG
GATCTCACAGTGTTGGCAGAACTCATTGTGTGAAGCTGGTGCACCGTCTG
TACCCAGAAGTTGACCCTGCACTGAACCCTGACCATGTTCCGCATATGCT
CCATAAGTGTCCTGATGCAATCCCAGACCCCAAGGCTGTTCAGTATGTGA
GGAATGACCGTGGCACACCCATGGTGCTGGACAACAACTACTATAGGAAC
ATATTGGACAACAAGGGCTTGATGATGGTTGATCATCAGCTAGCCACCGA
CAAGAGGACAAGACCTTATGTTAAG
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