CX078552

Overview
NameCX078552
Unique NameCX078552
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length751
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PER49_ARATH (Peroxidase 49 OS=Arabidopsis thaliana GN=PER49 PE=2 SV=2)

HSP 1 Score: 231.491 bits (589), Expect = 3.817e-60
Identity = 114/237 (48.10%), Postives = 150/237 (63.29%), Query Frame = 2
Query:   65 MASSISYLFVTLILSIISLLACTSN--AQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFARCAAFRNRIYN-------DTNIDPAFATTRRTTCP 748
            MA   S+L +  ++  + L  C  +   +L P +YA SCP    I R  + KAV R+ R AAS+LRL FHDCFV GCDGS+LLD +     EKN+ PN  SARGF+V+D IK  LE  C  TVSCAD+L +AARD   L GGP+W VPLGRRD+R+AS S +N+ IP P+++  T++S F  +GL   D+  LSG H IGF+RC +FR R+YN       D  ++ +FA   R  CP
Sbjct:    1 MARLTSFLLLLSLICFVPLCLCDKSYGGKLFPGYYAHSCPQVNEIVRSVVAKAVARETRMAASLLRLHFHDCFVQGCDGSLLLDSSGRVATEKNSNPNSKSARGFDVVDQIKAELEKQCPGTVSCADVLTLAARDSSVLTGGPSWVVPLGRRDSRSASLSQSNNNIPAPNNTFQTILSKFNRQGLDITDLVALSGSHTIGFSRCTSFRQRLYNQSGNGSPDMTLEQSFAANLRQRCP 237          
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PERX_NICSY (Lignin-forming anionic peroxidase OS=Nicotiana sylvestris PE=2 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 4.220e-59
Identity = 115/217 (53.00%), Postives = 146/217 (67.28%), Query Frame = 2
Query:  101 ILSIISLLACTSNAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFARCAAFRNRIY-NDTNIDPAFATTRRTTCP 748
            I S++ L     +AQLS TFY  +CPN     R  + +A++ + R AAS++RL FHDCFV GCD S+LLD+T +   EK A PN  SARGF +I+  K  +E  C   VSCADIL VAARD  A +GGP+WTV LGRRD+ TAS++ A + +PGP   L  LIS FA+KGL+ +DM  LSG H IG A+C  FR+RIY N T+ID  FA+TRR  CP
Sbjct:   14 IFSLLLLSCMQCHAQLSATFYDNTCPNALNTIRTSVRQAISSERRMAASLIRLHFHDCFVQGCDASILLDETPSIESEKTALPNLGSARGFGIIEDAKREVEKICPGVVSCADILTVAARDASAAVGGPSWTVKLGRRDSTTASKTLAETDLPGPFDPLNRLISSFASKGLSTRDMVALSGAHTIGQAQCFLFRDRIYSNGTDIDAGFASTRRRQCP 230          
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PER53_ARATH (Peroxidase 53 OS=Arabidopsis thaliana GN=PER53 PE=1 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 5.511e-59
Identity = 112/228 (49.12%), Postives = 148/228 (64.91%), Query Frame = 2
Query:   86 LFVTLILSIISLLACTSNAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFARCAAFRNRIYN-------DTNIDPAFATTRRTTCP 748
            LF+  ++ I+S +  TS+AQL+ TFY+ +CPN   I R  + +A+    R  AS++RL FHDCFVNGCD S+LLDDT +   EKNAGPN NSARGF V+D IKT LE AC   VSC+D+LA+A+   V+L GGP+WTV LGRRD+ TA+ + ANS IP P  SL+ +   F+A GL   D+  LSG H  G ARC  F NR++N       D  ++    +T +  CP
Sbjct:   12 LFIISLIVIVSSIFGTSSAQLNATFYSGTCPNASAIVRSTIQQALQSDTRIGASLIRLHFHDCFVNGCDASILLDDTGSIQSEKNAGPNVNSARGFNVVDNIKTALENACPGVVSCSDVLALASEASVSLAGGPSWTVLLGRRDSLTANLAGANSSIPSPIESLSNITFKFSAVGLNTNDLVALSGAHTFGRARCGVFNNRLFNFSGTGNPDPTLNSTLLSTLQQLCP 239          
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PER1_WHEAT (Peroxidase OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 2.094e-58
Identity = 124/217 (57.14%), Postives = 145/217 (66.82%), Query Frame = 2
Query:  104 LSIISLLACTSNAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTG-EKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFARCAAFRNRIY-NDTNIDPAFATTRRTTCP 748
            L ++  LA  ++ QLS TFY TSCP      +  +  AV+  PR  AS+LRL FHDCF  GCD SVLL      TG E+NAGPN  S RGF VID IKT+LE+ C  TVSCADIL VAARD V  LGGP+WTVPLGRRD+ TAS S ANS +PGPSSS + L + F  K L   DM  LSG H IG A+C+ FR RIY  DTNI+ AFAT+ +  CP
Sbjct:   11 LVVLVALATAASGQLSSTFYDTSCPRALVAIKSGVAAAVSSDPRMGASLLRLHFHDCF--GCDASVLL------TGMEQNAGPNVGSLRGFGVIDNIKTQLESVCKQTVSCADILTVAARDSVVALGGPSWTVPLGRRDSTTASASLANSDLPGPSSSRSQLEAAFLKKNLNTVDMVALSGAHTIGKAQCSNFRTRIYGGDTNINTAFATSLKANCP 219          
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PER66_MAIZE (Peroxidase 66 OS=Zea mays GN=PER66 PE=1 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 2.315e-57
Identity = 119/232 (51.29%), Postives = 156/232 (67.24%), Query Frame = 2
Query:   65 MASSISYLFVTLILS---IISLLACTSNAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRN-SARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFARCAAFRNRIYNDTNIDPAFATTRRTTCP 748
            MA+S+S   +  + S   ++  LA  ++AQLS TFY  SCPN     R  +  AV ++PR  AS+LRL FHDCFV GCD S+LL+DT   +GE++ GPN   + RGF V+++IK ++E+ C   VSCADILAVAARDGV  LGGP+WTV LGRRD+ TAS +   S +P P+SSL  L+S +  K L   DM  LSG H IG A+C++F + IYNDTNI+ AFA + R  CP
Sbjct:    1 MAASVSASCLNRLSSLAVVLVALASAASAQLSSTFYDRSCPNALSTIRSGVNSAVRQEPRVGASLLRLHFHDCFVRGCDASLLLNDT---SGEQSQGPNLTLNPRGFVVVNSIKAQVESVCPGIVSCADILAVAARDGVVALGGPSWTVLLGRRDS-TASFAGQTSDLPPPTSSLGQLLSAYNKKNLNPTDMVALSGAHTIGQAQCSSFNDHIYNDTNINSAFAASLRANCP 228          
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PER72_ARATH (Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=1 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 3.024e-57
Identity = 116/240 (48.33%), Postives = 144/240 (60.00%), Query Frame = 2
Query:   65 MASSISYLFVTLILSIISLLACTSNAQ-----LSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFARCAAFRNRIYN-------DTNIDPAFATTRRTTCP 748
            MA S++ L   L L   S     S A      L P FY  SCP  Q I +  + KA    PR  AS+LRL FHDCFV GCD S+LLD + T   EK + PNRNSARGFE+I+ IK  LE  C  TVSCADILA+AARD   + GGP+W VPLGRRDAR AS S +N+ IP P+++  T+++ F  +GL   D+  LSG H IG +RC +FR R+YN       D  +   +AT  R  CP
Sbjct:    1 MAKSLNILIAALSLIAFSPFCLCSKAYGSGGYLFPQFYDQSCPKAQEIVQSIVAKAFEHDPRMPASLLRLHFHDCFVKGCDASILLDSSGTIISEKRSNPNRNSARGFELIEEIKHALEQECPETVSCADILALAARDSTVITGGPSWEVPLGRRDARGASLSGSNNDIPAPNNTFQTILTKFKRQGLDLVDLVSLSGSHTIGNSRCTSFRQRLYNQSGNGKPDMTLSQYYATLLRQRCP 240          
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PER15_ARATH (Peroxidase 15 OS=Arabidopsis thaliana GN=PER15 PE=2 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 3.024e-57
Identity = 111/243 (45.68%), Postives = 150/243 (61.73%), Query Frame = 2
Query:   65 MASSISYLFVTLILSIISLLACTSN--------AQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFARCAAFRNRIYN-------DTNIDPAFATTRRTTCP 748
            MA   S+L +  ++  ++L  C  +          L P FY +SCP  + I R  + KAV R+ R AAS++RL FHDCFV GCDGS+LLD + +   EKN+ PN  SARGFEV+D IK  LE  C  TVSCAD L +AARD   L GGP+W VPLGRRD+ +AS S +N+ IP P+++  T+++ F  +GL   D+  LSG H IGF+RC +FR R+YN       D  ++ ++A   R  CP
Sbjct:    1 MARIGSFLIILYLIYALTLCICDDDESNYGGDKGNLFPGFYRSSCPRAEEIVRSVVAKAVARETRMAASLMRLHFHDCFVQGCDGSLLLDTSGSIVTEKNSNPNSRSARGFEVVDEIKAALENECPNTVSCADALTLAARDSSVLTGGPSWMVPLGRRDSTSASLSGSNNNIPAPNNTFNTIVTRFNNQGLDLTDVVALSGSHTIGFSRCTSFRQRLYNQSGNGSPDRTLEQSYAANLRQRCP 243          
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PER42_MAIZE (Peroxidase 42 OS=Zea mays GN=PER42 PE=2 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 3.950e-57
Identity = 117/229 (51.09%), Postives = 157/229 (68.56%), Query Frame = 2
Query:   71 SSISYLFVTLILSIIS--LLACTSNAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRN-SARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFARCAAFRNRIYNDTNIDPAFATTRRTTCP 748
            SS S L ++L++ +++  L A T++AQLS TFY TSCP+        +  AV +Q R  AS+LRL FHDCF+ GCD S+LL+DT+   GE+   PN   + R F+V+++IK ++EAAC   VSCADILAVAARDGV  LGGP+WTV LGRRD+ T S  +  S +P P+SSL  L++ ++ K L A DM  LSG H IG A+C++F   IYNDTNI+ AFAT+ +  CP
Sbjct:    4 SSGSCLIISLLVVVVAAALSASTASAQLSSTFYDTSCPSAMSTISSGVNSAVAQQARVGASLLRLHFHDCFIQGCDASILLNDTS---GEQTQPPNLTLNPRAFDVVNSIKAQVEAACPGVVSCADILAVAARDGVVALGGPSWTVLLGRRDS-TGSFPSQTSDLPPPTSSLQALLAAYSKKNLDATDMVALSGAHTIGQAQCSSFNGHIYNDTNINAAFATSLKANCP 228          
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PER1_HORVU (Peroxidase 1 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 6.737e-57
Identity = 126/230 (54.78%), Postives = 152/230 (66.09%), Query Frame = 2
Query:   65 MASSISYLFVTLILSIISLLACTSNAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAK-GLTAQDMTVLSGGHAIGFARCAAFRNRIY-NDTNIDPAFATTRRTTCP 748
            MASS SY   T +L +++L+   S AQLSPTFY TSCP      +  +  AV   PR  AS+LRL FHDCFV GCD SVLL        E+NA PN  S RGF VID+IKT++EA C  TVSCADIL VAARD V  LGGP+WTVPLGRRD+  A+++ AN+ +PG +SS A L + F  K GL   DM  LSG H IG A+C+ FR RIY  DTNI+ A+A + R  CP
Sbjct:    1 MASS-SY---TSLLVLVALVTAAS-AQLSPTFYDTSCPRALATIKSGVMAAVTSDPRMGASLLRLHFHDCFVQGCDASVLLSGM-----EQNAIPNAGSLRGFGVIDSIKTQIEAICKQTVSCADILTVAARDSVVALGGPSWTVPLGRRDSIDANENEANTDLPGFNSSRAELEAAFLKKGGLNTVDMVALSGAHTIGQAQCSTFRARIYGGDTNINAAYAASLRANCP 220          
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PER14_ARATH (Peroxidase 14 OS=Arabidopsis thaliana GN=PER14 PE=2 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.501e-56
Identity = 111/242 (45.87%), Postives = 147/242 (60.74%), Query Frame = 2
Query:   65 MASSISYLFVTLILSIISLLACTSNAQ-------LSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFARCAAFRNRIYN-------DTNIDPAFATTRRTTCP 748
            MA   S+L +  +   ++L  C + +        L P FY +SCP  + I R  + KA  R+ R AAS++RL FHDCFV GCDGS+LLD + +   EKN+ PN  SARGFEV+D IK  LE  C  TVSCAD L +AARD   L GGP+WTVPLGRRD+ TAS++  N  +P P +   T+   F+ +GL   D+  LSG H IGF+RC +FR R+YN       DT ++ ++A   R  CP
Sbjct:    1 MARIGSFLILLSLTYALTLCICDNASNFGGNKRNLFPDFYRSSCPRAEEIVRSVVAKAFERETRMAASLMRLHFHDCFVQGCDGSLLLDTSGSIVTEKNSNPNSRSARGFEVVDEIKAALENECPNTVSCADALTLAARDSSVLTGGPSWTVPLGRRDSATASRAKPNKDLPEPDNLFDTIFLRFSNEGLNLTDLVALSGSHTIGFSRCTSFRQRLYNQSGSGSPDTTLEKSYAAILRQRCP 242          
The following BLAST results are available for this feature:
BLAST of CX078552 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
PER49_ARATH3.817e-6048.10Peroxidase 49 OS=Arabidopsis thaliana GN=PER49 PE=... [more]
PERX_NICSY4.220e-5953.00Lignin-forming anionic peroxidase OS=Nicotiana syl... [more]
PER53_ARATH5.511e-5949.12Peroxidase 53 OS=Arabidopsis thaliana GN=PER53 PE=... [more]
PER1_WHEAT2.094e-5857.14Peroxidase OS=Triticum aestivum PE=2 SV=1[more]
PER66_MAIZE2.315e-5751.29Peroxidase 66 OS=Zea mays GN=PER66 PE=1 SV=1[more]
PER72_ARATH3.024e-5748.33Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=... [more]
PER15_ARATH3.024e-5745.68Peroxidase 15 OS=Arabidopsis thaliana GN=PER15 PE=... [more]
PER42_MAIZE3.950e-5751.09Peroxidase 42 OS=Zea mays GN=PER42 PE=2 SV=1[more]
PER1_HORVU6.737e-5754.78Peroxidase 1 OS=Hordeum vulgare PE=2 SV=1[more]
PER14_ARATH1.501e-5645.87Peroxidase 14 OS=Arabidopsis thaliana GN=PER14 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_9G02_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-9G02-M3-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX078552 ID=CX078552; Name=CX078552; organism=Citrus sinensis; type=EST; length=751bp
AATTAAACCGCTTGCCGCTTCTAGCTAGCTCATCTGCTTTAACTTTCCAT
TTTTGGATTGGTTCATGGCATCTTCAATTTCTTATTTGTTTGTTACACTT
ATACTCTCAATTATATCTCTTCTAGCTTGCACCTCCAATGCGCAACTTTC
TCCAACCTTTTATGCAACATCTTGCCCCAATTTTCAAAGAATCGCGAGGG
ATGAAATGACCAAAGCTGTTAATAGACAACCGCGTAATGCTGCCTCTATT
CTTCGCCTCTTCTTCCATGACTGCTTCGTTAATGGCTGCGATGGGTCGGT
ACTACTAGATGACACAGCCACATTCACCGGCGAGAAGAATGCAGGACCAA
ACAGAAACTCTGCTAGGGGTTTTGAAGTGATTGACGCCATTAAAACTCGT
CTGGAAGCAGCTTGCAACGCCACCGTTTCATGTGCCGACATCCTTGCTGT
TGCAGCCCGAGACGGTGTCGCCTTGCTTGGAGGACCGACTTGGACGGTAC
CGCTCGGCCGGCGAGATGCAAGAACGGCCAGTCAGAGTGCAGCCAATAGC
CAAATCCCTGGACCATCCTCCAGCCTGGCAACACTCATATCAATGTTTGC
AGCCAAAGGCCTGACCGCCCAAGACATGACAGTCCTCTCCGGCGGCCACG
CCATCGGATTCGCTCGATGCGCCGCCTTCCGGAACCGCATATACAACGAC
ACCAACATTGACCCAGCTTTTGCAACCACCAGAAGAACAACCTGCCCGGC
T
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