CX078552

Overview
NameCX078552
Unique NameCX078552
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length751
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PER36_ARATH (Peroxidase 36 OS=Arabidopsis thaliana GN=PER36 PE=2 SV=2)

HSP 1 Score: 215.698 bits (548), Expect = 2.167e-55
Identity = 115/220 (52.27%), Postives = 139/220 (63.18%), Query Frame = 2
Query:   98 LILSIISLLAC-------------TSNAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFARCAAFRNRIYNDT-NIDP 715
            ++LS ISL+A              +S A LSP FY  SCPN Q I +  +  A    PR AASILRL FHDCFVNGCD SVLLD + T   EK +  NR+SARGFEVID IK+ LE  C  TVSCAD+LA+ ARD + + GGP+W V LGRRDAR AS   +   IP P S+L T+++MF  +GL   D+  L G H IG +RC  FR R+YN T N DP
Sbjct:   12 IVLSQISLVALFPLCICYQTHQSTSSVASLSPQFYENSCPNAQAIVQSYVANAYFNDPRMAASILRLHFHDCFVNGCDASVLLDSSGTMESEKRSNANRDSARGFEVIDEIKSALENECPETVSCADLLALVARDSIVICGGPSWEVYLGRRDAREASLIGSMENIPSPESTLQTILTMFNFQGLDLTDLVALLGSHTIGNSRCIGFRQRLYNHTGNNDP 231          
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PER54_ARATH (Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=2 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 3.697e-55
Identity = 109/224 (48.66%), Postives = 142/224 (63.39%), Query Frame = 2
Query:   68 ASSISYLFVTLILSIISLLACTSNAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFARCAAFRNRIYN---DTNIDPAFATT 730
            +S+    F+  ++ I+S L  TS+AQL+ TFY+ +CPN   I R  + +A+    R   S++RL FHDCFVNGCDGS+LLDDT++   EKNA  N NS RGF V+D+IKT LE AC   VSC+DILA+A+   V+L GGP+WTV LGRRD  TA+ S ANS +P P   L  + S F A GL   D+  LSG H  G  +C  F NR++N     N DP   +T
Sbjct:    7 SSTCDGFFIISLIVIVSSLFGTSSAQLNATFYSGTCPNASAIVRSTIQQALQSDARIGGSLIRLHFHDCFVNGCDGSLLLDDTSSIQSEKNAPANANSTRGFNVVDSIKTALENACPGIVSCSDILALASEASVSLAGGPSWTVLLGRRDGLTANLSGANSSLPSPFEGLNNITSKFVAVGLKTTDVVSLSGAHTFGRGQCVTFNNRLFNFNGTGNPDPTLNST 230          
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PER10_ARATH (Peroxidase 10 OS=Arabidopsis thaliana GN=PER10 PE=1 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 3.697e-55
Identity = 110/215 (51.16%), Postives = 143/215 (66.51%), Query Frame = 2
Query:  131 TSNAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFARCAAFRNRIYN-------DTNI--DPAFATTRRTTCP 748
            TSN  L+  FY  SCP  Q I +  + +A     R AAS+LRL FHDCFVNGCDGS+LL+D+  F GEKNA PNRNS RGFEVI+ IK+ +E++C  TVSCADI+A+AAR+ V L GGP W VPLGRRD+ TAS+ AAN+ +P P  +L  + + F   GL  +D+ VLSG H IGFA+C   ++R++N       D N+    A  +  + TCP
Sbjct:   45 TSN--LNYRFYDRSCPRLQTIVKSGVWRAFKDDSRIAASLLRLHFHDCFVNGCDGSILLNDSEDFKGEKNAQPNRNSVRGFEVIEDIKSDIESSCPLTVSCADIVALAAREAVVLTGGPFWPVPLGRRDSLTASEQAANTNLPSPFEALENITAKFVTLGLDLKDVVVLSGAHTIGFAQCFVIKHRLFNFKGSGQPDPNLAASSALLSKLKDTCP 257          
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PER1B_ARMRU (Peroxidase C1B OS=Armoracia rusticana GN=PRXC1B PE=3 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 4.087e-54
Identity = 110/234 (47.01%), Postives = 141/234 (60.26%), Query Frame = 2
Query:   71 SSISYLFVTLILSIISLLACTSNAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGL-TAQDMTVLSGGHAIGFARCAAFRNRIYN-------DTNIDPAFATTRRTTCP 748
            SS S+ ++ + L  ++  A  S+AQL+PTFY TSCPN   I RD +   +   PR  ASILRL FHDCFVNGCD S+LLD+T +F  EK+A  N NSARGF  +D IK  +E AC  TVSCAD+L +AA+  V L GGP+W VPLGRRD+  A    AN+ +P P  +L  L   FA  GL    D+  LSGGH  G  +C    +R+YN       D  ++  +  T R  CP
Sbjct:    5 SSTSFTWILITLGCLAFYASLSDAQLTPTFYDTSCPNVSNIVRDIIINELRSDPRITASILRLHFHDCFVNGCDASILLDNTTSFLTEKDALGNANSARGFPTVDRIKAAVERACPRTVSCADVLTIAAQQSVNLAGGPSWRVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDAFAKVGLDRPSDLVALSGGHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRQQCP 238          
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PER1A_ARMRU (Peroxidase C1A OS=Armoracia rusticana GN=PRXC1A PE=1 SV=2)

HSP 1 Score: 211.075 bits (536), Expect = 5.338e-54
Identity = 114/238 (47.90%), Postives = 145/238 (60.92%), Query Frame = 2
Query:   62 FMASSISYLFVTLI-LSIISLLACTSNAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLT-AQDMTVLSGGHAIGFARCAAFRNRIYN-------DTNIDPAFATTRRTTCP 748
            F +SS  +  +TLI L  + L A  S+AQL+PTFY  SCPN   I RD +   +   PR AASILRL FHDCFVNGCD S+LLD+T +F  EK+A  N NSARGF VID +K  +E+AC  TVSCAD+L +AA+  V L GGP+W VPLGRRD+  A    AN+ +P P  +L  L   F   GL  + D+  LSGGH  G  +C    +R+YN       D  ++  +  T R  CP
Sbjct:    3 FSSSSTLFTCITLIPLVCLILHASLSDAQLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRGLCP 240          
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PERA2_ARMRU (Peroxidase A2 OS=Armoracia rusticana GN=HRPA2 PE=1 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.553e-53
Identity = 102/209 (48.80%), Postives = 133/209 (63.64%), Query Frame = 2
Query:  143 QLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFARCAAFRNRIYN-------DTNIDPAFATTRRTTCP 748
            QL+ TFY+ +CPN   I R  + +A     R  AS++RL FHDCFV+GCD S+LLDD+ +   EKNAGPN NSARGF V+D IKT LE  C   VSC+DILA+A+   V+L GGP+WTV LGRRD+ TA+ + ANS IP P   L+ + S F+A GL   D+  LSG H  G ARC  F NR++N       D  ++    ++ +  CP
Sbjct:    1 QLNATFYSGTCPNASAIVRSTIQQAFQSDTRIGASLIRLHFHDCFVDGCDASILLDDSGSIQSEKNAGPNANSARGFNVVDNIKTALENTCPGVVSCSDILALASEASVSLTGGPSWTVLLGRRDSLTANLAGANSAIPSPFEGLSNITSKFSAVGLNTNDLVALSGAHTFGRARCGVFNNRLFNFSGTNGPDPTLNSTLLSSLQQLCP 209          
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PER5_ARATH (Peroxidase 5 OS=Arabidopsis thaliana GN=PER5 PE=2 SV=2)

HSP 1 Score: 209.534 bits (532), Expect = 1.553e-53
Identity = 109/225 (48.44%), Postives = 148/225 (65.78%), Query Frame = 2
Query:   80 SYLFVTLILSIISLLACTSNAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANS-QIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFARCAAFRNRIY-NDTNIDPAFATTRRTTCP 748
            S  FV +++SII L +    AQLSPTFY  SC N     R  +  A+ R+ R AAS++R+ FHDCFV+GCD S+LL+ T+T   E++A PN  S RGFEVID  K+ +E  C   VSCADI+AVAARD    +GGP W V +GRRD+  A ++ ANS ++PG   +L  L  +F+ KGL  +D+  LSG H IG ++C  FR+R+Y N ++ID  FA+TR+  CP
Sbjct:    5 SLRFVLMMVSII-LTSSICQAQLSPTFYDQSCRNALSKIRSSVRTAIARERRMAASLIRMHFHDCFVHGCDASILLEGTSTIESERDALPNFKSVRGFEVIDKAKSEVEKVCPGIVSCADIIAVAARDASEYVGGPKWAVKVGRRDSTAAFKALANSGELPGFKDTLDQLSGLFSKKGLNTRDLVALSGAHTIGQSQCFLFRDRLYENSSDIDAGFASTRKRRCP 228          
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PER1C_ARMRU (Peroxidase C1C (Fragment) OS=Armoracia rusticana GN=PRXC1C PE=3 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.553e-53
Identity = 110/218 (50.46%), Postives = 135/218 (61.93%), Query Frame = 2
Query:  119 LLACTSNAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLT-AQDMTVLSGGHAIGFARCAAFRNRIYN-------DTNIDPAFATTRRTTCP 748
            L A  SNAQL+PTFY  SCPN   I RD +   +   P  AASILRL FHDCFVNGCD S+LLD+T +F  EK+A  N NSARGF V+D IK  +E AC  TVSCAD+L +AA+  V L GGP+W VPLGRRD+R A    AN+ +P PS +L  L + FA  GL    D+  LSGGH  G  +C    +R+YN       D  ++  +  T R  CP
Sbjct:    2 LHASFSNAQLTPTFYDNSCPNVSNIVRDIIINELRSDPSIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFPVVDRIKAAVERACPRTVSCADVLTIAAQQSVNLAGGPSWRVPLGRRDSRQAFLDLANANLPAPSFTLPELKAAFANVGLNRPSDLVALSGGHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRQQCP 219          
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PER38_ARATH (Peroxidase 38 OS=Arabidopsis thaliana GN=PER38 PE=2 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 3.460e-53
Identity = 112/236 (47.46%), Postives = 146/236 (61.86%), Query Frame = 2
Query:   65 MASSISYLFVTLILSIISLLACTSNAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGL-TAQDMTVLSGGHAIGFARCAAFRNRIYN-------DTNIDPAFATTRRTTCP 748
            M SS+  L   L+L  +SL    S+AQLSP+FY  +CP    I  + +  A+   PR AASILRL FHDCFVNGCD S+LLD+T +F  EK+A  N NSARGF+VID +K  +E AC  TVSCAD+LA+AA++ + L GGP+W VP GRRD+       AN  +PGPSS+L  L   F   GL  + D+  LSGGH  G ++C    +R+YN       D  +D ++  T R  CP
Sbjct:    1 MHSSLIKLGFLLLLLQVSL----SHAQLSPSFYDKTCPQVFDIVTNTIVNALRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFDVIDKMKAAIEKACPRTVSCADMLAIAAKESIVLAGGPSWMVPNGRRDSLRGFMDLANDNLPGPSSTLKQLKDRFKNVGLDRSSDLVALSGGHTFGKSQCQFIMDRLYNFGETGLPDPTLDKSYLATLRKQCP 232          
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PER32_ARATH (Peroxidase 32 OS=Arabidopsis thaliana GN=PER32 PE=1 SV=3)

HSP 1 Score: 207.994 bits (528), Expect = 4.519e-53
Identity = 111/237 (46.84%), Postives = 143/237 (60.34%), Query Frame = 2
Query:   62 FMASSISYLFVTLILSIISLLACTSNAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGL-TAQDMTVLSGGHAIGFARCAAFRNRIYN-------DTNIDPAFATTRRTTCP 748
            F  SS+S     + L  + L +  S+AQL+PTFY  +CP+   I RD +   +   PR AASILRL FHDCFVNGCD S+LLD+T +F  EK+A PN NSARGF VID +K  +E AC  TVSCADIL +AA+  V L GGP+W VPLGRRD+  A  + AN+ +P P  +L  L + F   GL    D+  LSGGH  G  +C    +R+YN       D  ++  +  T R  CP
Sbjct:    3 FSYSSLSTWTTLMTLGCLLLHSSISSAQLTPTFYDNTCPSVFTIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAAPNANSARGFPVIDRMKAAVETACPRTVSCADILTIAAQQAVNLAGGPSWRVPLGRRDSLQAFFALANTNLPAPFFTLPQLKASFQNVGLDRPSDLVALSGGHTFGKNQCQFIMDRLYNFSNTGLPDPTLNTTYLQTLRGQCP 239          
The following BLAST results are available for this feature:
BLAST of CX078552 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
PER36_ARATH2.167e-5552.27Peroxidase 36 OS=Arabidopsis thaliana GN=PER36 PE=... [more]
PER54_ARATH3.697e-5548.66Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=... [more]
PER10_ARATH3.697e-5551.16Peroxidase 10 OS=Arabidopsis thaliana GN=PER10 PE=... [more]
PER1B_ARMRU4.087e-5447.01Peroxidase C1B OS=Armoracia rusticana GN=PRXC1B PE... [more]
PER1A_ARMRU5.338e-5447.90Peroxidase C1A OS=Armoracia rusticana GN=PRXC1A PE... [more]
PERA2_ARMRU1.553e-5348.80Peroxidase A2 OS=Armoracia rusticana GN=HRPA2 PE=1... [more]
PER5_ARATH1.553e-5348.44Peroxidase 5 OS=Arabidopsis thaliana GN=PER5 PE=2 ... [more]
PER1C_ARMRU1.553e-5350.46Peroxidase C1C (Fragment) OS=Armoracia rusticana G... [more]
PER38_ARATH3.460e-5347.46Peroxidase 38 OS=Arabidopsis thaliana GN=PER38 PE=... [more]
PER32_ARATH4.519e-5346.84Peroxidase 32 OS=Arabidopsis thaliana GN=PER32 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_9G02_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-9G02-M3-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX078552 ID=CX078552; Name=CX078552; organism=Citrus sinensis; type=EST; length=751bp
AATTAAACCGCTTGCCGCTTCTAGCTAGCTCATCTGCTTTAACTTTCCAT
TTTTGGATTGGTTCATGGCATCTTCAATTTCTTATTTGTTTGTTACACTT
ATACTCTCAATTATATCTCTTCTAGCTTGCACCTCCAATGCGCAACTTTC
TCCAACCTTTTATGCAACATCTTGCCCCAATTTTCAAAGAATCGCGAGGG
ATGAAATGACCAAAGCTGTTAATAGACAACCGCGTAATGCTGCCTCTATT
CTTCGCCTCTTCTTCCATGACTGCTTCGTTAATGGCTGCGATGGGTCGGT
ACTACTAGATGACACAGCCACATTCACCGGCGAGAAGAATGCAGGACCAA
ACAGAAACTCTGCTAGGGGTTTTGAAGTGATTGACGCCATTAAAACTCGT
CTGGAAGCAGCTTGCAACGCCACCGTTTCATGTGCCGACATCCTTGCTGT
TGCAGCCCGAGACGGTGTCGCCTTGCTTGGAGGACCGACTTGGACGGTAC
CGCTCGGCCGGCGAGATGCAAGAACGGCCAGTCAGAGTGCAGCCAATAGC
CAAATCCCTGGACCATCCTCCAGCCTGGCAACACTCATATCAATGTTTGC
AGCCAAAGGCCTGACCGCCCAAGACATGACAGTCCTCTCCGGCGGCCACG
CCATCGGATTCGCTCGATGCGCCGCCTTCCGGAACCGCATATACAACGAC
ACCAACATTGACCCAGCTTTTGCAACCACCAGAAGAACAACCTGCCCGGC
T
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