CX078552

Overview
NameCX078552
Unique NameCX078552
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length751
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PERN_ARMRU (Peroxidase N OS=Armoracia rusticana GN=HRPN PE=2 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.717e-52
Identity = 111/226 (49.12%), Postives = 139/226 (61.50%), Query Frame = 2
Query:   92 VTLILSIISLLACTSNAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFARCAAFRNRIYN-------DTNIDPAFATTRRTTCP 748
            V L +  + +L     AQLSP  YA SCPN  +I RD++  A+  + R AAS++RL FHDCFVNGCD SVLLD T     EK A PN NS RGFEVID IK  +E AC   VSCADIL +AARD V L GGP W V LGR+D   A+QS+AN+ +P P   L  +I+ FAA GL   D+  LSG H  G A+C  F NR++N       D+ ++    +  +T CP
Sbjct:   12 VLLTVFTLCMLCSAVRAQLSPDIYAKSCPNLLQIVRDQVKIALKAEIRMAASLIRLHFHDCFVNGCDASVLLDGT---NSEKLAIPNVNSVRGFEVIDTIKAAVENACPGVVSCADILTLAARDSVYLSGGPQWRVALGRKDGLVANQSSANN-LPSPFEPLDAIIAKFAAVGLNVTDVVALSGAHTFGQAKCDLFSNRLFNFTGAGTPDSTLETTLLSDLQTVCP 233          
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PER3_ARMRU (Peroxidase C3 OS=Armoracia rusticana GN=PRXC3 PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.717e-52
Identity = 111/225 (49.33%), Postives = 136/225 (60.44%), Query Frame = 2
Query:   98 LILSIISLLACTSNAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLT-AQDMTVLSGGHAIGFARCAAFRNRIYN-------DTNIDPAFATTRRTTCP 748
            LILS + L A  SNAQL P FY  +CP+   I  D +   +   PR AAS+LRL FHDCFV GCD S+LLD++ +F  EK+A PN NSARGF VID +KT LE AC  TVSCAD+L +A++  V L GGP W VPLGRRD+  A    AN+ +P P  +LA L   FA  GL    D+  LSGGH  G A+C     R+YN       D  +DP +    R  CP
Sbjct:   15 LILSCLLLQASNSNAQLRPDFYFRTCPSVFNIIGDIIVDELRTDPRIAASLLRLHFHDCFVRGCDASILLDNSTSFRTEKDAAPNANSARGFGVIDRMKTSLERACPRTVSCADVLTIASQISVLLSGGPWWPVPLGRRDSVEAFFDLANTALPSPFFTLAQLKKAFADVGLNRPSDLVALSGGHTFGRAQCQFVTPRLYNFNGTNRPDPTLDPTYLVQLRALCP 239          
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PER15_IPOBA (Peroxidase 15 OS=Ipomoea batatas GN=pod PE=1 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 2.243e-52
Identity = 112/236 (47.46%), Postives = 141/236 (59.75%), Query Frame = 2
Query:   65 MASSISYLFVTLILSIISLLACTSNAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTAT-FTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFARCAAFRNRIYNDTNI---DPAFATTRRTT----CP 748
            MAS    L + L + I S     SNAQLS TFY+T+CPN   I R  + +A+    R   S++RL FHDCFV+GCDGS+LLD+  T    EK+A PN NS RGF+V+D IKT +E AC   VSC DILA+A+   V+L GGP+W V LGRRD RTA+Q  AN+ +P P  +L  L   F   GL   D+  LSG H  G A+C  F  R++N +N    DP   TT   T    CP
Sbjct:    1 MASFSPLLAMALAIFIFS---SHSNAQLSSTFYSTTCPNVSAIVRTVVQQALQNDARIGGSLIRLHFHDCFVDGCDGSLLLDNNGTTIVSEKDALPNTNSTRGFDVVDNIKTAVENACPGVVSCVDILALASESSVSLAGGPSWNVLLGRRDRRTANQGGANTSLPSPFENLTNLTQKFTNVGLNVNDLVALSGAHTFGRAQCRTFSPRLFNFSNTGNPDPTLNTTYLATLQQICP 233          
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PER40_ARATH (Peroxidase 40 OS=Arabidopsis thaliana GN=PER40 PE=2 SV=2)

HSP 1 Score: 205.297 bits (521), Expect = 2.929e-52
Identity = 101/177 (57.06%), Postives = 124/177 (70.06%), Query Frame = 2
Query:  161 YATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFARCAAFRNRI 691
            Y  SCP  + I    +   V   PR AAS+LRL FHDCFVNGCD SVLLDDT    GEK A PN NS RGFEVID+IK+ +E+ C  TVSCADILA+AARD V + GGP W V +GR+D+RTAS+ AA + +P P+S+++TLIS F   GL+  DM  LSGGH +G ARC +F  R+
Sbjct:   55 YRNSCPEAESIVYSWVETTVLEDPRMAASLLRLHFHDCFVNGCDASVLLDDTEGLVGEKTAPPNLNSLRGFEVIDSIKSDIESVCPETVSCADILAMAARDSVVVSGGPRWEVEVGRKDSRTASKQAATNGLPSPNSTVSTLISTFQNLGLSQTDMVALSGGHTLGKARCTSFTARL 231          
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PER33_ARATH (Peroxidase 33 OS=Arabidopsis thaliana GN=PER33 PE=1 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 3.826e-52
Identity = 110/239 (46.03%), Postives = 144/239 (60.25%), Query Frame = 2
Query:   62 FMASSISYLFVTLILSIISLLACTS--NAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGL-TAQDMTVLSGGHAIGFARCAAFRNRIYN-------DTNIDPAFATTRRTTCP 748
            F +SSI+    T+++++  L+ C S  +AQL+PTFY TSCP    I RD +   +   PR A SILRL FHDCFVNGCD S+LLD+T +F  EK+A  N NSARGF VID +K  +E AC  TVSCAD+L +AA+  V L GGP+W VPLGRRD+  A    AN+ +P P  +L  L + F   GL    D+  LSG H  G  +C    +R+YN       D  ++  +  T R  CP
Sbjct:    3 FSSSSITSFTWTVLITVGCLMLCASFSDAQLTPTFYDTSCPTVTNIVRDTIVNELRSDPRIAGSILRLHFHDCFVNGCDASILLDNTTSFRTEKDALGNANSARGFPVIDRMKAAVERACPRTVSCADMLTIAAQQSVTLAGGPSWKVPLGRRDSLQAFLDLANANLPAPFFTLPQLKANFKNVGLDRPSDLVALSGAHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRGQCP 241          
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PER34_ARATH (Peroxidase 34 OS=Arabidopsis thaliana GN=PER34 PE=1 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 4.996e-52
Identity = 113/238 (47.48%), Postives = 142/238 (59.66%), Query Frame = 2
Query:   62 FMASSISYLFVTLI-LSIISLLACTSNAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGL-TAQDMTVLSGGHAIGFARCAAFRNRIYN-------DTNIDPAFATTRRTTCP 748
            F +SS S  +  LI L  + L A  S AQL+PTFY  SCPN   I R+ +   +   PR AASILRL FHDCFVNGCD S+LLD+T +F  EK+A  N NSARGF VID +K  +E AC  TVSCAD+L +AA+  V L GGP+W VPLGRRD+  A    AN+ +P P  +L  L + F   GL    D+  LSGGH  G  +C    +R+YN       D  ++  +  T R  CP
Sbjct:    3 FSSSSTSSTWTILITLGCLMLHASLSAAQLTPTFYDRSCPNVTNIVRETIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFPVIDRMKAAVERACPRTVSCADMLTIAAQQSVTLAGGPSWRVPLGRRDSLQAFLELANANLPAPFFTLPQLKASFRNVGLDRPSDLVALSGGHTFGKNQCQFILDRLYNFSNTGLPDPTLNTTYLQTLRGLCP 240          
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PER2_ARMRU (Peroxidase C2 OS=Armoracia rusticana GN=PRXC2 PE=3 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 4.996e-52
Identity = 112/235 (47.66%), Postives = 144/235 (61.28%), Query Frame = 2
Query:   68 ASSISYLFVTLILSIISLLACTSNAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGL-TAQDMTVLSGGHAIGFARCAAFRNRIYN-------DTNIDPAFATTRRTTCP 748
            +SS+  L   L+L  +SL    S+AQLSP+FY  +CP    IA + +  A+   PR AASILRL FHDCFVNGCD S+LLD+T +F  EK+A  N  SARGF+VID +K  +E AC  TVSCAD+LA+AA+  V L GGP+W VP GRRD+       AN  +PGPSS+L  L   F   GL    D+  LSGGH  G  +C    +R+YN       D  +D ++ +T R  CP
Sbjct:    4 SSSLIKLGFLLLLLNVSL----SHAQLSPSFYDKTCPQVFDIATNTIKTALRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNARSARGFDVIDTMKAAVEKACPKTVSCADLLAIAAQKSVVLAGGPSWKVPSGRRDSLRGFMDLANDNLPGPSSTLQVLKDKFRNVGLDRPSDLVALSGGHTFGKNQCQFIMDRLYNFSNSGKPDPTLDKSYLSTLRKQCP 234          
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PER11_ARATH (Peroxidase 11 OS=Arabidopsis thaliana GN=PER11 PE=1 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 6.525e-52
Identity = 98/232 (42.24%), Postives = 140/232 (60.34%), Query Frame = 2
Query:   77 ISYLFVTLILSIISLLACTSNAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFARCAAFRNRIYNDTNIDPA-------FATTRRTTCPA 751
            + ++  T+ +   S      +  L+  +Y ++CP    + + EM   V   PRNAA I+RL FHDCFV GCDGSVLLD+T T  GEK A PN NS +G++++D IK  +E+ C   VSCAD+L + ARD   L+GGP W VP+GR+D++TAS   A + +P P   L ++I+ F ++GL+ +DM  L G H IG A+C  FR+RIY D  +  A       +  + R  CPA
Sbjct:    7 VFFMVHTIFIPCFSFDTPGKDLPLTLDYYKSTCPTVFDVIKKEMECIVKEDPRNAAIIIRLHFHDCFVQGCDGSVLLDETETLQGEKKASPNINSLKGYKIVDRIKNIIESECPGVVSCADLLTIGARDATILVGGPYWDVPVGRKDSKTASYELATTNLPTPEEGLISIIAKFYSQGLSVEDMVALIGAHTIGKAQCRNFRSRIYGDFQVTSALNPVSETYLASLREICPA 238          
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PER4_ARATH (Peroxidase 4 OS=Arabidopsis thaliana GN=PER4 PE=2 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.454e-51
Identity = 102/217 (47.00%), Postives = 140/217 (64.52%), Query Frame = 2
Query:  101 ILSIISLLACTSNAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFARCAAFRNRIY-NDTNIDPAFATTRRTTCP 748
            IL ++  L C S AQLSPTFY  +C N     R  +  A++R+ R AAS++RL FHDCFVNGCD SV+L  T T   E+++  N  SARGFEVID  K+ +E+ C   VSCADI+AVAARD    +GGP + V +GRRD+  A ++ A+  +P   +SL  L  +F  KGL  +D+  LSG H +G A+C  F+ R+Y N ++ID  F++TR+  CP
Sbjct:    6 ILVLLLSLCCFSQAQLSPTFYDQTCQNALSTIRSSIRTAISRERRMAASLIRLHFHDCFVNGCDASVMLVATPTMESERDSLANFQSARGFEVIDQAKSAVESVCPGVVSCADIIAVAARDASEYVGGPRYDVKVGRRDSTNAFRAIADRDLPNFRASLNDLSELFLRKGLNTRDLVALSGAHTLGQAQCLTFKGRLYDNSSDIDAGFSSTRKRRCP 222          
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PER37_ARATH (Peroxidase 37 OS=Arabidopsis thaliana GN=PER37 PE=2 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 2.480e-51
Identity = 112/236 (47.46%), Postives = 143/236 (60.59%), Query Frame = 2
Query:   65 MASSISYLFVTLILSIISLLACTSNAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGL-TAQDMTVLSGGHAIGFARCAAFRNRIYN-------DTNIDPAFATTRRTTCP 748
            M SS+  L   L+L  +SL    S+AQLSP+FY  +CP    IA   +  A+   PR AASILRL FHDCFVNGCD S+LLD+T +F  EK+A  N NSARGF+VID +K  +E AC  TVSCAD+LA+AA++ V L GGP+W VP GRRD+       AN  +P P  +L  L   F   GL  A D+  LSGGH  G  +C    +R+YN       D  +D ++ +T R  CP
Sbjct:    1 MHSSLIKLGFLLLLIQVSL----SHAQLSPSFYDKTCPQVFDIATTTIVNALRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFDVIDKMKAAVEKACPKTVSCADLLAIAAQESVVLAGGPSWRVPNGRRDSLRGFMDLANDNLPAPFFTLNQLKDRFKNVGLDRASDLVALSGGHTFGKNQCQFIMDRLYNFSNTGLPDPTLDKSYLSTLRKQCP 232          
The following BLAST results are available for this feature:
BLAST of CX078552 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
PERN_ARMRU1.717e-5249.12Peroxidase N OS=Armoracia rusticana GN=HRPN PE=2 S... [more]
PER3_ARMRU1.717e-5249.33Peroxidase C3 OS=Armoracia rusticana GN=PRXC3 PE=3... [more]
PER15_IPOBA2.243e-5247.46Peroxidase 15 OS=Ipomoea batatas GN=pod PE=1 SV=1[more]
PER40_ARATH2.929e-5257.06Peroxidase 40 OS=Arabidopsis thaliana GN=PER40 PE=... [more]
PER33_ARATH3.826e-5246.03Peroxidase 33 OS=Arabidopsis thaliana GN=PER33 PE=... [more]
PER34_ARATH4.996e-5247.48Peroxidase 34 OS=Arabidopsis thaliana GN=PER34 PE=... [more]
PER2_ARMRU4.996e-5247.66Peroxidase C2 OS=Armoracia rusticana GN=PRXC2 PE=3... [more]
PER11_ARATH6.525e-5242.24Peroxidase 11 OS=Arabidopsis thaliana GN=PER11 PE=... [more]
PER4_ARATH1.454e-5147.00Peroxidase 4 OS=Arabidopsis thaliana GN=PER4 PE=2 ... [more]
PER37_ARATH2.480e-5147.46Peroxidase 37 OS=Arabidopsis thaliana GN=PER37 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_9G02_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-9G02-M3-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX078552 ID=CX078552; Name=CX078552; organism=Citrus sinensis; type=EST; length=751bp
AATTAAACCGCTTGCCGCTTCTAGCTAGCTCATCTGCTTTAACTTTCCAT
TTTTGGATTGGTTCATGGCATCTTCAATTTCTTATTTGTTTGTTACACTT
ATACTCTCAATTATATCTCTTCTAGCTTGCACCTCCAATGCGCAACTTTC
TCCAACCTTTTATGCAACATCTTGCCCCAATTTTCAAAGAATCGCGAGGG
ATGAAATGACCAAAGCTGTTAATAGACAACCGCGTAATGCTGCCTCTATT
CTTCGCCTCTTCTTCCATGACTGCTTCGTTAATGGCTGCGATGGGTCGGT
ACTACTAGATGACACAGCCACATTCACCGGCGAGAAGAATGCAGGACCAA
ACAGAAACTCTGCTAGGGGTTTTGAAGTGATTGACGCCATTAAAACTCGT
CTGGAAGCAGCTTGCAACGCCACCGTTTCATGTGCCGACATCCTTGCTGT
TGCAGCCCGAGACGGTGTCGCCTTGCTTGGAGGACCGACTTGGACGGTAC
CGCTCGGCCGGCGAGATGCAAGAACGGCCAGTCAGAGTGCAGCCAATAGC
CAAATCCCTGGACCATCCTCCAGCCTGGCAACACTCATATCAATGTTTGC
AGCCAAAGGCCTGACCGCCCAAGACATGACAGTCCTCTCCGGCGGCCACG
CCATCGGATTCGCTCGATGCGCCGCCTTCCGGAACCGCATATACAACGAC
ACCAACATTGACCCAGCTTTTGCAACCACCAGAAGAACAACCTGCCCGGC
T
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