CX078552

Overview
NameCX078552
Unique NameCX078552
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length751
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PER23_ARATH (Peroxidase 23 OS=Arabidopsis thaliana GN=PER23 PE=2 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 4.230e-51
Identity = 105/225 (46.67%), Postives = 137/225 (60.89%), Query Frame = 2
Query:   98 LILSIISLLACTSNAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLT-AQDMTVLSGGHAIGFARCAAFRNRIYN-------DTNIDPAFATTRRTTCP 748
            LI+  + L A  SNAQL P FY  +CP    I  D +   +   PR AAS+LRL FHDCFV GCD S+LLD++ +F  EK+A PN+NS RGF+VID +K  +E AC  TVSCADI+ +A++  V L GGP W VPLGRRD+  A  + AN+ +P P S+L  L + FA  GL    D+  LSGGH  G A+C     R+YN       D +++P +    R  CP
Sbjct:   15 LIVGCLLLQASNSNAQLRPDFYFRTCPPIFNIIGDTIVNELRTDPRIAASLLRLHFHDCFVRGCDASILLDNSTSFRTEKDAAPNKNSVRGFDVIDRMKAAIERACPRTVSCADIITIASQISVLLSGGPWWPVPLGRRDSVEAFFALANTALPSPFSTLTQLKTAFADVGLNRPSDLVALSGGHTFGKAQCQFVTPRLYNFNGTNRPDPSLNPTYLVELRRLCP 239          
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PERX_TOBAC (Lignin-forming anionic peroxidase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.099e-50
Identity = 108/227 (47.58%), Postives = 135/227 (59.47%), Query Frame = 2
Query:   89 FVTLILSIISLLACTSNAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFARCAAFRNRIYN-------DTNIDPAFATTRRTTCP 748
            FV  IL ++++    SNAQLS TFY T+CPN   I R  M +      R  A I+RL FHDCFVNGCDGS+LLD   T T EK+A P    A GF+++D IKT LE  C   VSCADILA+A+  GV L  GP+W V  GR+D+ TA++S ANS IP P  +LA +I  F  KG+   D+  LSG H  G ARC  F  R++N       D  +D  F  T +  CP
Sbjct:    6 FVGAILFLVAIFGA-SNAQLSATFYDTTCPNVTSIVRGVMDQRQRTDARAGAKIIRLHFHDCFVNGCDGSILLDTDGTQT-EKDA-PANVGAGGFDIVDDIKTALENVCPGVVSCADILALASEIGVVLAKGPSWQVLFGRKDSLTANRSGANSDIPSPFETLAVMIPQFTNKGMDLTDLVALSGAHTFGRARCGTFEQRLFNFNGSGNPDLTVDATFLQTLQGICP 229          
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PER59_ARATH (Peroxidase 59 OS=Arabidopsis thaliana GN=PER59 PE=1 SV=2)

HSP 1 Score: 199.134 bits (505), Expect = 2.099e-50
Identity = 107/226 (47.35%), Postives = 138/226 (61.06%), Query Frame = 2
Query:   92 VTLILSIISLLACTSNAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFARCAAFRNRIYN-------DTNIDPAFATTRRTTCP 748
            V L +  + +L     AQLSP  YA SCPN  +I R ++  A+  + R AAS++RL FHDCFVNGCD S+LLD   +   EK A PN NSARGFEVID IK  +E AC   VSCADIL +AARD V L GGP W V LGR+D   A+Q++AN+ +P P   L  +I+ F A  L   D+  LSG H  G A+CA F NR++N       D  ++ +  +  +T CP
Sbjct:   12 VLLTVFTLCMLCSGVRAQLSPDIYAKSCPNLVQIVRKQVAIALKAEIRMAASLIRLHFHDCFVNGCDASLLLDGADS---EKLAIPNINSARGFEVIDTIKAAVENACPGVVSCADILTLAARDSVVLSGGPGWRVALGRKDGLVANQNSANN-LPSPFEPLDAIIAKFVAVNLNITDVVALSGAHTFGQAKCAVFSNRLFNFTGLGNPDATLETSLLSNLQTVCP 233          
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PER17_ARATH (Peroxidase 17 OS=Arabidopsis thaliana GN=PER17 PE=2 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 2.742e-50
Identity = 103/224 (45.98%), Postives = 137/224 (61.16%), Query Frame = 2
Query:   98 LILSIISLLACTSNAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFARCAAFRNRIYN-------DTNIDPAFATTRRTTCP 748
            LIL +  L    +   L P FY+ +CP  + I R EM KA+ ++ R+ AS++R  FHDCFVNGCD S+LLDDT    GEK +  N +S R FEV+D IK  LE AC ATVSCADI+ +AARD VAL GGP W V LGR+D+ TASQ  ++  +P P ++   LI +F    L+ +DM  LSG H+IG  RC +   R+YN       D  ++P++       CP
Sbjct:    7 LILYLTLLTVVVTGETLRPRFYSETCPEAESIVRREMKKAMIKEARSVASVMRFQFHDCFVNGCDASLLLDDTPNMLGEKLSLSNIDSLRSFEVVDDIKEALEKACPATVSCADIVIMAARDAVALTGGPDWEVKLGRKDSLTASQQDSDDIMPSPRANATFLIDLFERFNLSVKDMVALSGSHSIGQGRCFSIMFRLYNQSGSGKPDPALEPSYRKKLDKLCP 230          
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PER1_ZINEL (Basic peroxidase OS=Zinnia elegans GN=POD1 PE=1 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.361e-49
Identity = 108/230 (46.96%), Postives = 140/230 (60.87%), Query Frame = 2
Query:   71 SSISYLFVTLILSIISL---LACTSNAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFARCAAFRNRIYNDT-NIDPAFATTRRTTCP 748
            SS + L V L + +IS+   ++C  NAQLS TFY T+CP      R  +  +V+   RNAA ++RL FHDCFV GCD S+LL       G + A P  +   G+EVIDA K  +E  C   VSCADILAVAARD    +GGP+WTV LGRRD+ T++ + A + +P  +  L+ LIS FA KGL  ++M  LSG H +G ARC  FR RIYN T  I+P F  +    CP
Sbjct:    6 SSGTILMVPLFMLLISVNYFMSC--NAQLSTTFYDTTCPTALSTIRTSIRSSVSSNRRNAALVIRLLFHDCFVQGCDASLLLSGA----GSERASPANDGVLGYEVIDAAKAAVERVCPGVVSCADILAVAARDASVAVGGPSWTVRLGRRDSTTSNAAQAATDLPRGNMVLSQLISNFANKGLNTREMVALSGSHTLGQARCIRFRGRIYNSTLRIEPNFNRSLSQACP 229          
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PER2_ZINEL (Basic peroxidase OS=Zinnia elegans GN=POD3 PE=1 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.777e-49
Identity = 108/230 (46.96%), Postives = 140/230 (60.87%), Query Frame = 2
Query:   71 SSISYLFVTLILSIISL---LACTSNAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFARCAAFRNRIYNDT-NIDPAFATTRRTTCP 748
            SS + L V L + +IS+   ++C  NAQLS TFY T+CP      R  +  +V+   RNAA ++RL FHDCFV GCD S+LL       G + A P  +   G+EVIDA K  +E  C   VSCADILAVAARD    +GGP+WTV LGRRD+ T++ + A + +P  +  L+ LIS FA KGL  ++M  LSG H +G ARC  FR RIYN T  I+P F  +    CP
Sbjct:    6 SSGTTLMVPLFMLLISVNYFMSC--NAQLSTTFYDTTCPTALSTIRTSIRSSVSSNRRNAALVIRLLFHDCFVQGCDASLLLSGA----GSERASPANDGVLGYEVIDAAKAAVERVCPGVVSCADILAVAARDASVAVGGPSWTVRLGRRDSTTSNAAQAATDLPRGNMVLSQLISNFANKGLNTREMVALSGSHTLGQARCIRFRGRIYNSTLRIEPNFNRSLSQACP 229          
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PER20_ARATH (Peroxidase 20 OS=Arabidopsis thaliana GN=PER20 PE=2 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 2.321e-49
Identity = 110/202 (54.46%), Postives = 128/202 (63.37%), Query Frame = 2
Query:  104 LSIISLLACTSNA------QLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFARCAAFRNRI 691
            LS+I L A T++        L   FY  SCP  + I +  +  AV + PR AAS+LRL FHDCFV GCD SVLLD       EK A PN NS RGFEVID IK  LE AC  TVSC+DILA+AARD V L GGP W V LGRRD+  AS + AN  IP P+SSL +LI  F  +GL  QD+  LSG H IG ARC +F+ RI
Sbjct:   10 LSLIVLYAITTSVLGDFGEPLLKGFYKESCPLAEEIVKHNIEVAVLKDPRMAASLLRLQFHDCFVLGCDASVLLDTHGDMLSEKQATPNLNSLRGFEVIDYIKYLLEEACPLTVSCSDILALAARDSVFLRGGPWWEVLLGRRDSLKASFAGANQFIPAPNSSLDSLIINFKQQGLNIQDLIALSGAHTIGKARCVSFKQRI 211          
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PER1_ORYSJ (Peroxidase 1 OS=Oryza sativa subsp. japonica GN=PRX74 PE=2 SV=2)

HSP 1 Score: 195.667 bits (496), Expect = 2.321e-49
Identity = 100/213 (46.95%), Postives = 137/213 (64.32%), Query Frame = 2
Query:   80 SYLFVTLILSIISLLACTSNAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFARCAAFRNRIYNDTNIDPA 718
            S + + L+L+  +++A  S+AQL   FY+ SCP+ + + R EM +A+   P  A  +LR+ FHDCFV GCDGSVLLD     T EK+A PN+ + RGF  ++ +K  +E AC  TVSCAD+LA+ ARD V L  GP W VPLGRRD R  S +    Q+P P+++   L  MFAAK L  +D+ VLS GH IG + C +F +R+YN T +D A
Sbjct:    4 SRVILALLLAAAAVMA--SSAQLDEKFYSNSCPSVEAVVRKEMVRALGAAPSLAGPLLRMHFHDCFVRGCDGSVLLDSAGNSTAEKDATPNQ-TLRGFGFVERVKAAVEKACPGTVSCADVLALMARDAVWLSKGPFWAVPLGRRDGR-VSIANETDQLPPPTANFTELTQMFAAKNLDLKDLVVLSAGHTIGTSHCFSFTDRLYNFTGLDNA 212          
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PERE5_ARMRU (Peroxidase E5 OS=Armoracia rusticana GN=HRPE5 PE=1 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 3.031e-49
Identity = 103/210 (49.05%), Postives = 129/210 (61.43%), Query Frame = 2
Query:  143 QLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLT-AQDMTVLSGGHAIGFARCAAFRNRIYN-------DTNIDPAFATTRRTTCP 748
            QL P FY+ +CP+   I ++ +   +   PR AASILRL FHDCFV GCD S+LLD + +F  EK+A PN NSARGF VID +KT LE AC  TVSCADIL +A++  V L GGP+W VPLGRRD+  A    AN+ +P P  +LA L   FA  GL    D+  LSGGH  G ARC     R+YN       D  ++P++    R  CP
Sbjct:    1 QLRPDFYSRTCPSVFNIIKNVIVDELQTDPRIAASILRLHFHDCFVRGCDASILLDTSKSFRTEKDAAPNVNSARGFNVIDRMKTALERACPRTVSCADILTIASQISVLLSGGPSWAVPLGRRDSVEAFFDLANTALPSPFFTLAQLKKAFADVGLNRPSDLVALSGGHTFGRARCLFVTARLYNFNGTNRPDPTLNPSYLADLRRLCP 210          
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PER22_ARATH (Peroxidase 22 OS=Arabidopsis thaliana GN=PER22 PE=1 SV=2)

HSP 1 Score: 194.897 bits (494), Expect = 3.959e-49
Identity = 106/225 (47.11%), Postives = 134/225 (59.56%), Query Frame = 2
Query:   98 LILSIISLLACTSNAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLT-AQDMTVLSGGHAIGFARCAAFRNRIYN-------DTNIDPAFATTRRTTCP 748
            LIL  + L A  SNAQL P FY  +CP    I  + +   +   PR AAS+LRL FHDCFV GCD S+LLD++ +F  EK+A PN NSARGF VID +K  LE AC   VSCADIL +A++  V L GGP W VPLGRRD+  A  + AN+ +P P  +L  L + FA  GL    D+  LSGGH  G A+C     R+YN       D +++P +    R  CP
Sbjct:   15 LILGCLLLQASNSNAQLRPDFYFGTCPFVFDIIGNIIVDELQTDPRIAASLLRLHFHDCFVRGCDASILLDNSTSFRTEKDAAPNANSARGFNVIDRMKVALERACPGRVSCADILTIASQISVLLSGGPWWPVPLGRRDSVEAFFALANTALPSPFFNLTQLKTAFADVGLNRTSDLVALSGGHTFGRAQCQFVTPRLYNFNGTNSPDPSLNPTYLVELRRLCP 239          
The following BLAST results are available for this feature:
BLAST of CX078552 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
PER23_ARATH4.230e-5146.67Peroxidase 23 OS=Arabidopsis thaliana GN=PER23 PE=... [more]
PERX_TOBAC2.099e-5047.58Lignin-forming anionic peroxidase OS=Nicotiana tab... [more]
PER59_ARATH2.099e-5047.35Peroxidase 59 OS=Arabidopsis thaliana GN=PER59 PE=... [more]
PER17_ARATH2.742e-5045.98Peroxidase 17 OS=Arabidopsis thaliana GN=PER17 PE=... [more]
PER1_ZINEL1.361e-4946.96Basic peroxidase OS=Zinnia elegans GN=POD1 PE=1 SV... [more]
PER2_ZINEL1.777e-4946.96Basic peroxidase OS=Zinnia elegans GN=POD3 PE=1 SV... [more]
PER20_ARATH2.321e-4954.46Peroxidase 20 OS=Arabidopsis thaliana GN=PER20 PE=... [more]
PER1_ORYSJ2.321e-4946.95Peroxidase 1 OS=Oryza sativa subsp. japonica GN=PR... [more]
PERE5_ARMRU3.031e-4949.05Peroxidase E5 OS=Armoracia rusticana GN=HRPE5 PE=1... [more]
PER22_ARATH3.959e-4947.11Peroxidase 22 OS=Arabidopsis thaliana GN=PER22 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_9G02_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-9G02-M3-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX078552 ID=CX078552; Name=CX078552; organism=Citrus sinensis; type=EST; length=751bp
AATTAAACCGCTTGCCGCTTCTAGCTAGCTCATCTGCTTTAACTTTCCAT
TTTTGGATTGGTTCATGGCATCTTCAATTTCTTATTTGTTTGTTACACTT
ATACTCTCAATTATATCTCTTCTAGCTTGCACCTCCAATGCGCAACTTTC
TCCAACCTTTTATGCAACATCTTGCCCCAATTTTCAAAGAATCGCGAGGG
ATGAAATGACCAAAGCTGTTAATAGACAACCGCGTAATGCTGCCTCTATT
CTTCGCCTCTTCTTCCATGACTGCTTCGTTAATGGCTGCGATGGGTCGGT
ACTACTAGATGACACAGCCACATTCACCGGCGAGAAGAATGCAGGACCAA
ACAGAAACTCTGCTAGGGGTTTTGAAGTGATTGACGCCATTAAAACTCGT
CTGGAAGCAGCTTGCAACGCCACCGTTTCATGTGCCGACATCCTTGCTGT
TGCAGCCCGAGACGGTGTCGCCTTGCTTGGAGGACCGACTTGGACGGTAC
CGCTCGGCCGGCGAGATGCAAGAACGGCCAGTCAGAGTGCAGCCAATAGC
CAAATCCCTGGACCATCCTCCAGCCTGGCAACACTCATATCAATGTTTGC
AGCCAAAGGCCTGACCGCCCAAGACATGACAGTCCTCTCCGGCGGCCACG
CCATCGGATTCGCTCGATGCGCCGCCTTCCGGAACCGCATATACAACGAC
ACCAACATTGACCCAGCTTTTGCAACCACCAGAAGAACAACCTGCCCGGC
T
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