CX078552

Overview
NameCX078552
Unique NameCX078552
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length751
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PER3_ARATH (Peroxidase 3 OS=Arabidopsis thaliana GN=PER3 PE=1 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 8.819e-49
Identity = 104/237 (43.88%), Postives = 149/237 (62.87%), Query Frame = 2
Query:   65 MASSISYLFVTLILSIISLLACTSNAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFARCAAFRNRIYNDT---NIDPAF-----ATTRRTTCPA 751
            +A S+S+  V ++  I         AQL   FYA SCPN ++I +D ++  V+  P  AA+++R+ FHDCFV GCDGSVL++ T+    E++A PN  + RGF  IDAIK+ LEA C   VSCADI+A+A+RD V   GGP W+VP GRRD R ++ + A + IP P+S++  L ++FA +GL  +D+ +LSG H IG + C++F NR+YN T     DPA      A  +   CP+
Sbjct:    7 IALSVSFFLVGIVGPI--------QAQLQMNFYANSCPNAEKIVQDFVSNHVSNAPSLAAALIRMHFHDCFVRGCDGSVLINSTSG-NAERDATPNL-TVRGFGFIDAIKSVLEAQCPGIVSCADIIALASRDAVVFTGGPNWSVPTGRRDGRISNAAEALANIPPPTSNITNLQTLFANQGLDLKDLVLLSGAHTIGVSHCSSFTNRLYNFTGRGGQDPALDSEYAANLKSRKCPS 233          
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PER5_VITVI (Peroxidase 5 OS=Vitis vinifera GN=GSVIVT00037159001 PE=1 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.965e-48
Identity = 101/231 (43.72%), Postives = 138/231 (59.74%), Query Frame = 2
Query:   77 ISYLFVTLILSIISLLACTSNAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFARCAAFRNRIYN-------DTNIDPAFATTRRTTCP 748
            +++L +T +L  + L        L   FY TSC   + I +DE+ K   R    A  ++R+ FHDCFV GCDGSVL+D T + T EK++  N  S RGFEVID+ K RLEA C   VSCADI+A AARD V + GG  + VP GRRD R +  S A++ +P P+ ++  L   F+ KGLT  +M  LSG H IG + C++F NR+YN       D  +DP +A + +T CP
Sbjct:   45 VTWLSLTWVLVFLCL-------SLQVGFYRTSCGLAEFIVKDEVRKGFIRDSGVAPGLVRMHFHDCFVRGCDGSVLIDSTPSNTAEKDSPANNPSLRGFEVIDSAKARLEAVCKGVVSCADIVAFAARDSVEITGGLGYDVPAGRRDGRISLASEASTNLPPPTFTVDQLTQFFSNKGLTQDEMVTLSGAHTIGRSHCSSFSNRLYNFNGTSGQDPTLDPQYAASLKTQCP 268          
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PER71_ARATH (Peroxidase 71 OS=Arabidopsis thaliana GN=PER71 PE=1 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.566e-48
Identity = 103/203 (50.74%), Postives = 125/203 (61.58%), Query Frame = 2
Query:  158 FYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFARCAAFRNRIYN------DTNIDPAFATTRRTTCP 748
            FY T+CP  + I R+ +    +  PR A  ILR+ FHDCFV GCDGS+L+    T   E+ AGPN N  +GFEVID  KT+LEAAC   VSCADILA+AARD V L  G  W VP GRRD R +  S AN+ +PGP  S+A     F+A GL  +D+ VL GGH IG A C  FRNR++N      D  IDP F    +T CP
Sbjct:   39 FYLTTCPRAETIVRNAVNAGFSSDPRIAPGILRMHFHDCFVQGCDGSILISGANT---ERTAGPNLN-LQGFEVIDNAKTQLEAACPGVVSCADILALAARDTVILTQGTGWQVPTGRRDGRVSLASNANN-LPGPRDSVAVQQQKFSALGLNTRDLVVLVGGHTIGTAGCGVFRNRLFNTTGQTADPTIDPTFLAQLQTQCP 236          
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PER58_ARATH (Peroxidase 58 OS=Arabidopsis thaliana GN=PER58 PE=2 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.274e-47
Identity = 107/229 (46.72%), Postives = 130/229 (56.77%), Query Frame = 2
Query:   92 VTLILSIISLLACTSNAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTAT--FTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFARCAAFRNRIYN--------DTNIDPAFATTRRTTCP 748
            + L+L  I +    SNAQL+  FY+T+CPN   IAR  + +A     R  A ++RL FHDCFVNGCDGSVLLD        GEK A  N  S  GFEVID IKT LE  C   VSCADILA+AA   VAL GGP+  V LGRRD RTA ++ A + +P    SL  L S F+   L   D+  LSG H  G  +C    NR++N        D +I+P F  T R  CP
Sbjct:    7 IPLVLLPILMFGVLSNAQLTSDFYSTTCPNVTAIARGLIERASRNDVRLTAKVMRLHFHDCFVNGCDGSVLLDAAPADGVEGEKEAFQNAGSLDGFEVIDDIKTALENVCPGVVSCADILAIAAEISVALAGGPSLDVLLGRRDGRTAIRADAVAALPLGPDSLEILTSKFSVHNLDTTDLVALSGAHTFGRVQCGVINNRLHNFSGNSGQSDPSIEPEFLQTLRRQCP 235          
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PER39_ARATH (Peroxidase 39 OS=Arabidopsis thaliana GN=PER39 PE=1 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.078e-46
Identity = 85/204 (41.67%), Postives = 130/204 (63.73%), Query Frame = 2
Query:   98 LILSIISLLACTSNAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFARCAAFRNRIYNDTNI 709
            L++ +I  L   S AQL   FY  +CP  ++I +D + + +N  P  AA ++R+ FHDCFV GCDGS+L++ T++    +   P   + RGF+ ID +K+ LE+ C   VSCADI+ +A RD +  +GGPTW VP GRRD R ++ + A + IP P  +  TLI++F  +GL  +D+ +LSG H IG + C++F NR++N T +
Sbjct:    9 LMILVIQGLVTFSEAQLKMGFYDQTCPYAEKIVQDVVNQHINNAPSLAAGLIRMHFHDCFVRGCDGSILINATSSNQQVEKLAPPNLTVRGFDFIDKVKSALESKCPGIVSCADIITLATRDSIVAIGGPTWNVPTGRRDGRISNFAEAMNNIPPPFGNFTTLITLFGNQGLDVKDLVLLSGAHTIGVSHCSSFSNRLFNFTGV 212          
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PER2_ARAHY (Cationic peroxidase 2 OS=Arachis hypogaea GN=PNC2 PE=2 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.078e-46
Identity = 101/204 (49.51%), Postives = 124/204 (60.78%), Query Frame = 2
Query:  158 FYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFARCAAFRNRIYN-------DTNIDPAFATTRRTTCP 748
            FY+ +CP  + I R  +   VN  P  AA ILR+ FHDCFV GCDGS+L+   AT   EK A  N    RG+E+ID  KT+LEAAC   VSCADILA+AARD V L GG +W VP GRRD R  SQ++  S +P PS S+      FAAKGL  QD+  L GGH IG + C  F NR++N       D  IDP+F +  +  CP
Sbjct:   36 FYSRTCPRAESIVRSTVRSHVNSDPTLAAKILRMHFHDCFVQGCDGSILISGPAT---EKTAFANLG-LRGYEIIDDAKTQLEAACPGVVSCADILALAARDSVVLSGGLSWQVPTGRRDGR-VSQASDVSNLPAPSDSVDVQKQKFAAKGLNTQDLVTLVGGHTIGTSECQFFSNRLFNFNGTAAADPAIDPSFVSNLQALCP 234          
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PER30_ARATH (Peroxidase 30 OS=Arabidopsis thaliana GN=PER30 PE=1 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 4.097e-46
Identity = 91/218 (41.74%), Postives = 138/218 (63.30%), Query Frame = 2
Query:   92 VTLILSIISLLACTSNAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFARCAAFRNRIYN-------DTNIDPAFA 724
            V ++++++  +  +S AQL   FYA SCPN ++I  D +   ++  P  AA ++R+ FHDCFV GCDGSVL++ T+    E++A PN  + RGF  ++ IK  LE  C  TVSCADI+A+ ARD V   GGP+W+VP GRRD R ++++ A + IP P+S+  TL  +F  +GL  +D+ +LSG H IG + C++   R+YN       D ++D  +A
Sbjct:   11 VVVVVTVLIGMLRSSEAQLQMNFYAKSCPNAEKIISDHIQNHIHNGPSLAAPLIRMHFHDCFVRGCDGSVLINSTSG-NAERDAPPNL-TLRGFGFVERIKALLEKVCPKTVSCADIIALTARDAVVATGGPSWSVPTGRRDGRISNKTEATNNIPPPTSNFTTLQRLFKNQGLNLKDLVLLSGAHTIGVSHCSSMNTRLYNFSTTVKQDPSLDSQYA 226          
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PER1_ARATH (Peroxidase 1/2 OS=Arabidopsis thaliana GN=PER1 PE=1 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 9.127e-46
Identity = 97/228 (42.54%), Postives = 138/228 (60.53%), Query Frame = 2
Query:   86 LFVTLILSIISLLACTSNAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFARCAAFRNRIYN-------DTNIDPAFATTRRTTCP 748
            L + ++LS++ +        L   +Y + CP  + I R    + V+RQ   AA +LR+ FHDCFV GCDGSVLL  +A    E++A PN  + +G+EV+DA KT LE  C   +SCAD+LA+ ARD VA++GGP W VPLGRRD R +  + A   +P P + + TL   FA KGL A+D+ VLSGGH IG + CA   +R+YN       D +++P++    +  CP
Sbjct:    7 LALVVLLSVVGVSVAIPQL-LDLDYYRSKCPKAEEIVRGVTVQYVSRQKTLAAKLLRMHFHDCFVRGCDGSVLLK-SAKNDAERDAVPNL-TLKGYEVVDAAKTALERKCPNLISCADVLALVARDAVAVIGGPWWPVPLGRRDGRISKLNDALLNLPSPFADIKTLKKNFANKGLNAKDLVVLSGGHTIGISSCALVNSRLYNFTGKGDSDPSMNPSYVRELKRKCP 231          
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PER63_ARATH (Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=2 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 1.192e-45
Identity = 97/230 (42.17%), Postives = 137/230 (59.57%), Query Frame = 2
Query:   71 SSISYLFVTLILSIISL--LACTSNAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRN-SARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFARCAAFRNRI--YNDTNIDPAFATTRRTTC 745
            S +  L + L+L  +S   L+  + + L+  FY+ SCP F  I R+ +T      P  AA+ LRLFFHDCF NGCD SVL+  TA  T E+++  N +    GF+V+   KT LE AC  TVSC+DI+AVA RD +  +GGP + + LGRRD+RT+  S  +  +P PS  ++ LI  F+++G + Q+M  LSG H IGF+ C  F NR+   N T  +P FA   +  C
Sbjct:    5 SQLKNLTIILLLLCLSFQSLSFAAESHLTVDFYSKSCPKFLDIIRETITNKQISTPTTAAAALRLFFHDCFPNGCDASVLVSSTAFNTAERDSSINLSLPGDGFDVVIRAKTALELACPNTVSCSDIIAVAVRDLLVTVGGPYYEISLGRRDSRTSKSSLVSDLLPLPSMQISKLIDQFSSRGFSVQEMVALSGAHTIGFSHCKEFTNRVNPNNSTGYNPRFAVALKKAC 234          
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PER1_MAIZE (Peroxidase 1 OS=Zea mays GN=PER1 PE=1 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.557e-45
Identity = 100/233 (42.92%), Postives = 137/233 (58.80%), Query Frame = 2
Query:   86 LFVTLILSIISLLACTSNAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLD-DTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFARCAAFRNRIYN----------DTNIDPAFATTRRTTCPA 751
            L V    ++  LL  T+ AQL   FY TSCPN + + R  +  A  +    AA ++RL FHDCFV GCDGSVLL  +      E++A PN  S RGF+VIDA KT +E +C  TVSCADI+A AARD ++L G  ++ VP GRRD R  S +     +P P+S+  +L  +F AK L+ +DM VLSG H +G + CA+F  R++N          D  + P++A   R  CP+
Sbjct:   15 LTVVAACALCLLLPATARAQLRVGFYDTSCPNAEALVRQAVAAAFAKDAGIAAGLIRLHFHDCFVRGCDGSVLLTVNPGGGQTERDALPNNPSLRGFDVIDAAKTAVEQSCPRTVSCADIVAFAARDSISLTGSVSYQVPAGRRDGR-VSNATETVDLPPPTSTAQSLTDLFKAKELSVEDMVVLSGAHTVGRSFCASFFKRVWNTSTNPATAIVDAGLSPSYAQLLRALCPS 246          
The following BLAST results are available for this feature:
BLAST of CX078552 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
PER3_ARATH8.819e-4943.88Peroxidase 3 OS=Arabidopsis thaliana GN=PER3 PE=1 ... [more]
PER5_VITVI1.965e-4843.72Peroxidase 5 OS=Vitis vinifera GN=GSVIVT0003715900... [more]
PER71_ARATH2.566e-4850.74Peroxidase 71 OS=Arabidopsis thaliana GN=PER71 PE=... [more]
PER58_ARATH1.274e-4746.72Peroxidase 58 OS=Arabidopsis thaliana GN=PER58 PE=... [more]
PER39_ARATH1.078e-4641.67Peroxidase 39 OS=Arabidopsis thaliana GN=PER39 PE=... [more]
PER2_ARAHY1.078e-4649.51Cationic peroxidase 2 OS=Arachis hypogaea GN=PNC2 ... [more]
PER30_ARATH4.097e-4641.74Peroxidase 30 OS=Arabidopsis thaliana GN=PER30 PE=... [more]
PER1_ARATH9.127e-4642.54Peroxidase 1/2 OS=Arabidopsis thaliana GN=PER1 PE=... [more]
PER63_ARATH1.192e-4542.17Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=... [more]
PER1_MAIZE1.557e-4542.92Peroxidase 1 OS=Zea mays GN=PER1 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_9G02_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-9G02-M3-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX078552 ID=CX078552; Name=CX078552; organism=Citrus sinensis; type=EST; length=751bp
AATTAAACCGCTTGCCGCTTCTAGCTAGCTCATCTGCTTTAACTTTCCAT
TTTTGGATTGGTTCATGGCATCTTCAATTTCTTATTTGTTTGTTACACTT
ATACTCTCAATTATATCTCTTCTAGCTTGCACCTCCAATGCGCAACTTTC
TCCAACCTTTTATGCAACATCTTGCCCCAATTTTCAAAGAATCGCGAGGG
ATGAAATGACCAAAGCTGTTAATAGACAACCGCGTAATGCTGCCTCTATT
CTTCGCCTCTTCTTCCATGACTGCTTCGTTAATGGCTGCGATGGGTCGGT
ACTACTAGATGACACAGCCACATTCACCGGCGAGAAGAATGCAGGACCAA
ACAGAAACTCTGCTAGGGGTTTTGAAGTGATTGACGCCATTAAAACTCGT
CTGGAAGCAGCTTGCAACGCCACCGTTTCATGTGCCGACATCCTTGCTGT
TGCAGCCCGAGACGGTGTCGCCTTGCTTGGAGGACCGACTTGGACGGTAC
CGCTCGGCCGGCGAGATGCAAGAACGGCCAGTCAGAGTGCAGCCAATAGC
CAAATCCCTGGACCATCCTCCAGCCTGGCAACACTCATATCAATGTTTGC
AGCCAAAGGCCTGACCGCCCAAGACATGACAGTCCTCTCCGGCGGCCACG
CCATCGGATTCGCTCGATGCGCCGCCTTCCGGAACCGCATATACAACGAC
ACCAACATTGACCCAGCTTTTGCAACCACCAGAAGAACAACCTGCCCGGC
T
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