CX078552

Overview
NameCX078552
Unique NameCX078552
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length751
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PER2_MAIZE (Peroxidase 2 OS=Zea mays GN=PER2 PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.233e-42
Identity = 96/221 (43.44%), Postives = 137/221 (61.99%), Query Frame = 2
Query:  104 LSIISLLACTSNAQ--LSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTA-TFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALL--GGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFARCAAF-RNRIYNDTNIDPAFATTRRTTCP 748
            L +++  AC ++    L   +Y  +CP  + I +  M KA+ + P N A+++R+ FHDCFV GCD SVLLD T  + T EK A PN  S RGFE+IDAIK  LEAAC   VSCADI+A AARD    L  G  ++ +P GR D   ++ S +   +  P+S+L+ L S FA KG++ +D+ VLSG H +G + C++F  +R+   ++I+PA A   RT CP
Sbjct:   19 LLLLAAAACQASPYYPLELGYYRYTCPQAEAIVKASMEKAIAQNPGNGAAVIRMLFHDCFVEGCDASVLLDPTPFSPTPEKLAAPNNPSLRGFELIDAIKDALEAACPGVVSCADIIAFAARDASCFLSQGKVSFDMPSGRLDGTFSNASESVKFLVPPTSNLSDLASSFAVKGMSLEDLVVLSGAHTVGRSHCSSFVSDRLDVPSDINPALAAFLRTRCP 239          
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PER1_SOLLC (Suberization-associated anionic peroxidase 1 OS=Solanum lycopersicum GN=TAP1 PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.748e-42
Identity = 89/176 (50.57%), Postives = 118/176 (67.05%), Query Frame = 2
Query:  197 RDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDD-TATFTGEKNAGPNRNSARGFEVIDAIKTRLEAAC-NATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFARCAAFRNRIYNDTNIDPA 718
            R  +  A++ + R  AS++RL FHDCFV+GCDG +LLDD   TFTGE+N+ PN NSARG+EVI   K  +   C N +VSCADILA+AARD VA LGG T++V LGR DARTA+ S A +Q+P P  +L   I  F+ K  T ++M  L+G H +GFARC+     +    N++PA
Sbjct:   87 RAVVDSAIDAETRMGASLIRLHFHDCFVDGCDGGILLDDINGTFTGEQNSPPNANSARGYEVIAQAKQSVINTCPNVSVSCADILAIAARDSVAKLGGQTYSVALGRSDARTANFSGAINQLPAPFDNLTVQIQKFSDKNFTLREMVALAGAHTVGFARCST----VCTSGNVNPA 258          
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PERN_IPOBA (Neutral peroxidase OS=Ipomoea batatas PE=1 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 4.687e-42
Identity = 85/180 (47.22%), Postives = 116/180 (64.44%), Query Frame = 2
Query:  215 AVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNAT-VSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFARCAAFRNRIYNDTNIDPAFATTRRTTCPA 751
            A+  + R  AS++RL FHDCFV+GCDG +LL+DTA FTGE+ A  N NS RGF VID  K   +  C  T VSCAD+LA+AARD        T+ + LGR+DARTA+ + AN+Q+P P  +L+   + FA KG   ++M VL+G H +GF+RCA     +   TN++   + T + TCPA
Sbjct:   83 AITAETRMGASLIRLHFHDCFVDGCDGGILLNDTANFTGEQGAPANSNSVRGFSVIDQAKRNAQTKCADTPVSCADVLAIAARDAFRKFTNQTYNITLGRQDARTANLTGANTQLPAPFDNLSIQTAKFADKGFNQREMVVLAGAHTVGFSRCAV----LCTSTNLNQNRSATLQCTCPA 258          
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PERA_IPOBA (Anionic peroxidase OS=Ipomoea batatas PE=1 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 6.122e-42
Identity = 87/184 (47.28%), Postives = 120/184 (65.22%), Query Frame = 2
Query:  197 RDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAAC-NATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFARCAAFRNRIYNDTNIDPAFATTRRTTC 745
            ++ +  A+N + R  AS++RLFFHDCFV+GCD  +LL+DTATFTGE+ A  N NS RGF VI+  K  ++    + +VSCADIL++AARD      G T+TV LGR+DARTA+ + AN+Q+ GP+ +L + ++ FAAKG    +M  L G H IGFARC      +   T I+PA  +T    C
Sbjct:   76 KEVVVAAINAEARMGASLIRLFFHDCFVDGCDAGLLLNDTATFTGEQTAAGNNNSVRGFAVIEQAKQNVKTQMPDMSVSCADILSIAARDSFEKFSGSTYTVTLGRKDARTANFTGANTQLVGPNENLTSQLTKFAAKGFNGTEMVALLGSHTIGFARCPL----LCISTFINPARVSTLNCNC 255          
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PER70_ARATH (Peroxidase 70 OS=Arabidopsis thaliana GN=PER70 PE=2 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 6.122e-42
Identity = 103/231 (44.59%), Postives = 129/231 (55.84%), Query Frame = 2
Query:   83 YLFVTLILSIISLLACTSNAQLSPT--FYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFARCAAFRNRIYN-------DTNIDPAFATTRRTTCP 748
            Y+ +   L + +    T+N    P   +Y ++C N + I R  +       P NA  ILR+ FHDCFV GCD SVLL   A    E+ A PN  S RGF VI+  KT+LE AC  TVSCADILA+AARD V L GGP W VPLGR D R +   A+N  +PGP+ S+A     FA K L  QD+ VL+ GH IG A C  FR+R +N       D  I P+F    +  CP
Sbjct:   11 YVLLPFFLVLATNATHTNNFLPRPRTGYYGSACWNVESIVRSVVESNYLANPANAPGILRMHFHDCFVQGCDASVLL---AGPNSERTAIPNL-SLRGFNVIEEAKTQLEIACPRTVSCADILALAARDFVHLAGGPWWPVPLGRLDGRIS--LASNVILPGPTDSVAVQKLRFAEKNLNTQDLVVLAAGHTIGTAGCIVFRDRFFNYDNTGSPDPTIAPSFVPLIQAQCP 235          
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PER47_ARATH (Peroxidase 47 OS=Arabidopsis thaliana GN=PER47 PE=2 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 7.995e-42
Identity = 89/222 (40.09%), Postives = 135/222 (60.81%), Query Frame = 2
Query:   92 VTLILSIISLLACTSNAQ-LSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFARCAAFRNRI-YNDTNIDPAFATTRRTTCPA 751
            V+++L + +++    +A+ LS T+Y  SCP  ++I ++ +  A+   P  AA ++R+ FHDCF+ GCD S+LLD T   T EK++ P   S RG+E+ID  K ++E  C   VSCADI+A+AARD V   GGP + +P GR D +  S+      +P P  + + LI  F  +G T QD+  LSG H +G ARC++F+ R+   D+++D  FA T   TC A
Sbjct:    7 VSMVLLMHAIVGFPFHARGLSMTYYMMSCPFAEQIVKNSVNNALQADPTLAAGLIRMLFHDCFIEGCDASILLDSTKDNTAEKDS-PANLSLRGYEIIDDAKEKIENRCPGVVSCADIVAMAARDAVFWAGGPYYDIPKGRFDGK-RSKIEDTRNLPSPFLNASQLIQTFGQRGFTPQDVVALSGAHTLGVARCSSFKARLTVPDSSLDSTFANTLSKTCSA 226          
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PER25_ARATH (Peroxidase 25 OS=Arabidopsis thaliana GN=PER25 PE=2 SV=2)

HSP 1 Score: 170.629 bits (431), Expect = 7.995e-42
Identity = 97/229 (42.36%), Postives = 125/229 (54.59%), Query Frame = 2
Query:   83 YLFVTLILSIISLLACTSNAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFARCAAFRNRIYN-------DTNIDPAFATTRRTTCP 748
            Y ++ +I+ ++ L     +  L   +Y+TSCP  + I R  +    +  P  +  +LRL FHDCFV GCDGSVL+   +    E+ A PN    RG EVID  K RLEA C   VSCADILA+AARD V L  GP+W VP GR+D R +  + A S +P P  S+A     F  KGL   D+  L G H IG   C  FR R+YN       D  I P+F T  +T CP
Sbjct:    8 YCYIMIIMLVLVLGKEVRSQLLKNGYYSTSCPKAESIVRSTVESHFDSDPTISPGLLRLHFHDCFVQGCDGSVLIKGKSA---EQAALPNLG-LRGLEVIDDAKARLEAVCPGVVSCADILALAARDSVDLSDGPSWRVPTGRKDGRISLATEA-SNLPSPLDSVAVQKQKFQDKGLDTHDLVTLLGAHTIGQTDCLFFRYRLYNFTVTGNSDPTISPSFLTQLKTLCP 231          
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PERX_SOLTU (Suberization-associated anionic peroxidase OS=Solanum tuberosum PE=2 SV=2)

HSP 1 Score: 169.474 bits (428), Expect = 1.781e-41
Identity = 88/176 (50.00%), Postives = 116/176 (65.91%), Query Frame = 2
Query:  197 RDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDD-TATFTGEKNAGPNRNSARGFEVIDAIKTRLEAAC-NATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFARCAAFRNRIYNDTNIDPA 718
            R  +  A++ + R  AS++RL FHDCFV+GCDG +LLDD   TFTGE+N+ PN NSARG+EVI   K  +   C N +VSCADILA+AARD VA LGG T+ V LGR DARTA+ + A +Q+P P  +L   I  F  K  T ++M  L+G H +GFARC+     +    N++PA
Sbjct:   86 RGVVDSAIDAETRMGASLIRLHFHDCFVDGCDGGILLDDINGTFTGEQNSPPNANSARGYEVIAQAKQSVIDTCPNISVSCADILAIAARDSVAKLGGQTYNVALGRSDARTANFTGALTQLPAPFDNLTVQIQKFNDKNFTLREMVALAGAHTVGFARCST----VCTSGNVNPA 257          
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PER51_ARATH (Peroxidase 51 OS=Arabidopsis thaliana GN=PER51 PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 5.182e-41
Identity = 95/229 (41.48%), Postives = 132/229 (57.64%), Query Frame = 2
Query:   98 LILSIISLLACT--SNAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSAR-GFEVIDAIKTRLEAA--CNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFARCAAFRNRIYN---DTNIDPA----FATTRRTTCP 748
            L+L I+SL      S+AQL   FYA +CPN ++I R+ + K + +      + LRL+FHDCFVNGCD SV++  T T   EK+   N + A  GF+ +   K  ++A   C   VSCADIL +A RD V L GGP + V LGRRD  ++S S+   ++P P+  L  L ++FA  GL+  DM  LSG H +GFA C    NR+YN     N+DP     + T  + +CP
Sbjct:    9 LLLLILSLFLAINLSSAQLRGDFYAGTCPNVEQIVRNAVQKKIQQTFTTIPATLRLYFHDCFVNGCDASVMIASTNTNKAEKDHEDNLSLAGDGFDTVIKAKEAVDAVPNCRNKVSCADILTMATRDVVNLAGGPQYAVELGRRDGLSSSASSVTGKLPKPTFDLNQLNALFAENGLSPNDMIALSGAHTLGFAHCTKVFNRLYNFNKTNNVDPTINKDYVTELKASCP 237          
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PER48_ARATH (Putative Peroxidase 48 OS=Arabidopsis thaliana GN=PER48 PE=2 SV=3)

HSP 1 Score: 167.933 bits (424), Expect = 5.182e-41
Identity = 81/204 (39.71%), Postives = 118/204 (57.84%), Query Frame = 2
Query:  158 FYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFARCAAFRNRIYN-------DTNIDPAFATTRRTTCP 748
            +Y  SCP  ++I    +    N  P  A  I+RL FHDCF+ GCD SVLLD     T EK+A PN  S +GF+VIDA+K+ LE  C   VSCAD+L +AAR+ V + GGP + +  GR+D+  A +  A  ++P P ++L+ ++  F+ +G   ++   L G H+IG   C  F+NR+YN       D  ++P F    +T CP
Sbjct:   72 YYRESCPTAEKIIAKAIRDIYNVTPSVAPPIIRLLFHDCFIEGCDASVLLDADEAHTSEKDASPNL-SLKGFDVIDAVKSELENVCPGVVSCADLLVLAAREAVLVAGGPFYPLETGRKDSAAAYRDFAEHELPAPDATLSVILQRFSFRGFNERETVSLFGAHSIGITHCTFFKNRLYNFSATGKPDPELNPGFLQELKTKCP 274          
The following BLAST results are available for this feature:
BLAST of CX078552 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
PER2_MAIZE1.233e-4243.44Peroxidase 2 OS=Zea mays GN=PER2 PE=2 SV=1[more]
PER1_SOLLC2.748e-4250.57Suberization-associated anionic peroxidase 1 OS=So... [more]
PERN_IPOBA4.687e-4247.22Neutral peroxidase OS=Ipomoea batatas PE=1 SV=1[more]
PERA_IPOBA6.122e-4247.28Anionic peroxidase OS=Ipomoea batatas PE=1 SV=1[more]
PER70_ARATH6.122e-4244.59Peroxidase 70 OS=Arabidopsis thaliana GN=PER70 PE=... [more]
PER47_ARATH7.995e-4240.09Peroxidase 47 OS=Arabidopsis thaliana GN=PER47 PE=... [more]
PER25_ARATH7.995e-4242.36Peroxidase 25 OS=Arabidopsis thaliana GN=PER25 PE=... [more]
PERX_SOLTU1.781e-4150.00Suberization-associated anionic peroxidase OS=Sola... [more]
PER51_ARATH5.182e-4141.48Peroxidase 51 OS=Arabidopsis thaliana GN=PER51 PE=... [more]
PER48_ARATH5.182e-4139.71Putative Peroxidase 48 OS=Arabidopsis thaliana GN=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS08_9G02_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-9G02-M3-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX078552 ID=CX078552; Name=CX078552; organism=Citrus sinensis; type=EST; length=751bp
AATTAAACCGCTTGCCGCTTCTAGCTAGCTCATCTGCTTTAACTTTCCAT
TTTTGGATTGGTTCATGGCATCTTCAATTTCTTATTTGTTTGTTACACTT
ATACTCTCAATTATATCTCTTCTAGCTTGCACCTCCAATGCGCAACTTTC
TCCAACCTTTTATGCAACATCTTGCCCCAATTTTCAAAGAATCGCGAGGG
ATGAAATGACCAAAGCTGTTAATAGACAACCGCGTAATGCTGCCTCTATT
CTTCGCCTCTTCTTCCATGACTGCTTCGTTAATGGCTGCGATGGGTCGGT
ACTACTAGATGACACAGCCACATTCACCGGCGAGAAGAATGCAGGACCAA
ACAGAAACTCTGCTAGGGGTTTTGAAGTGATTGACGCCATTAAAACTCGT
CTGGAAGCAGCTTGCAACGCCACCGTTTCATGTGCCGACATCCTTGCTGT
TGCAGCCCGAGACGGTGTCGCCTTGCTTGGAGGACCGACTTGGACGGTAC
CGCTCGGCCGGCGAGATGCAAGAACGGCCAGTCAGAGTGCAGCCAATAGC
CAAATCCCTGGACCATCCTCCAGCCTGGCAACACTCATATCAATGTTTGC
AGCCAAAGGCCTGACCGCCCAAGACATGACAGTCCTCTCCGGCGGCCACG
CCATCGGATTCGCTCGATGCGCCGCCTTCCGGAACCGCATATACAACGAC
ACCAACATTGACCCAGCTTTTGCAACCACCAGAAGAACAACCTGCCCGGC
T
back to top