CX078552

Overview
NameCX078552
Unique NameCX078552
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length751
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PER43_ARATH (Peroxidase 43 OS=Arabidopsis thaliana GN=PER43 PE=2 SV=2)

HSP 1 Score: 167.162 bits (422), Expect = 8.840e-41
Identity = 92/224 (41.07%), Postives = 128/224 (57.14%), Query Frame = 2
Query:   98 LILSIISLLACTSNAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFARCAAFRNRIYN-------DTNIDPAFATTRRTTCP 748
            L LS++++    S A L   FY+ +CP  + I +  ++ A    P   A +LRL FHDCFV GCDGS+L+++ A    EKNA       RGFE+++A+K  LEAAC   VSC+DI+A+AARD ++L  GP + VP GRRD R ++ S A   +P  S S+  L + F  KGL A+D+ +LS  H IG   C     R+Y+       D  I+P F     T CP
Sbjct:   10 LALSLVTVFFGISLANLEVGFYSNTCPQAESIVKRVVSGAALSDPNLPAILLRLHFHDCFVEGCDGSILVNNGAI--SEKNAF-GHEGVRGFEIVEAVKAELEAACPGVVSCSDIVALAARDAISLANGPAYEVPTGRRDGRVSNMSLA-KDMPEVSDSIEILKAKFMQKGLNAKDLVLLSAAHTIGTTACFFMSKRLYDFLPGGQPDPTINPTFLPELTTQCP 229          
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PER62_ARATH (Peroxidase 62 OS=Arabidopsis thaliana GN=PER62 PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.508e-40
Identity = 97/224 (43.30%), Postives = 123/224 (54.91%), Query Frame = 2
Query:   98 LILSIISLLACTSNAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDM-TVLSGGHAIGFARCAAFRNRIYN------DTNIDPAFATTRRTTCP 748
            L++  +S L           FY+T+CPN + I R  +       P+ A  +LR+  HDCFV GCDGSVLL        E+ AG N N   GFEVID  K +LEAAC   VSCADILA+AARD V+L  G +W VP GRRD R +  S  N+ +P PS SLA     F+A  L  +D+ T++ GGH IG A C    NRI+N      D  +D  F    +  CP
Sbjct:    9 LVIVFLSCLIAVYGQGTRIGFYSTTCPNAETIVRTTVASHFGSDPKVAPGLLRMHNHDCFVQGCDGSVLLSGP---NSERTAGANVN-LHGFEVIDDAKRQLEAACPGVVSCADILALAARDSVSLTNGQSWQVPTGRRDGRVSLASNVNN-LPSPSDSLAIQQRKFSAFRLNTRDLVTLVGGGHTIGTAACGFITNRIFNSSGNTADPTMDQTFVPQLQRLCP 227          
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PER73_ARATH (Peroxidase 73 OS=Arabidopsis thaliana GN=PER73 PE=1 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.572e-40
Identity = 93/232 (40.09%), Postives = 131/232 (56.47%), Query Frame = 2
Query:   86 LFVTLILSI-ISLLACTSNAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSAR-GFEVIDAIKTRLEA--ACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFARCAAFRNRIYN-------DTNIDPAFATTRRTTCP 748
            L V + LS+ IS+   T+ AQL   FY  SCPN ++I +  + + + +      + LRLFFHDCFVNGCD SV++  T T   EK+   N + A  GF+V+   K  L+A  +C   VSCADILA+A RD V    GP++ V LGR D   ++ ++ N  +PGP++ +  L  +FA   LT +DM  LS  H +GFA C    NRIYN       D  ++ A+A   +  CP
Sbjct:    6 LVVVVTLSLAISMFPDTTTAQLKTNFYGNSCPNVEQIVKKVVQEKIKQTFVTIPATLRLFFHDCFVNGCDASVMIQSTPTNKAEKDHPDNISLAGDGFDVVIKAKKALDAIPSCKNKVSCADILALATRDVVVAAKGPSYAVELGRFDGLVSTAASVNGNLPGPNNKVTELNKLFAKNKLTQEDMIALSAAHTLGFAHCGKVFNRIYNFNLTHAVDPTLNKAYAKELQLACP 237          
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PER12_ARATH (Peroxidase 12 OS=Arabidopsis thaliana GN=PER12 PE=1 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.572e-40
Identity = 97/240 (40.42%), Postives = 134/240 (55.83%), Query Frame = 2
Query:   92 VTLILSIISLLACTSNA-----------------QLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRN-SARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDART-ASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFARCAAFRNRIY--NDTNIDPAFATTRRTTCP 748
            V   L +ISL+A T N                   LS  FY  +CP  + I R E+ K   R    AA+ILR+ FHDCFV GC+ SVLL  +A+  GE+++ PN     + F VI+ ++  ++  C   VSC+DILA+AARD V L GGP + VPLGRRD+   ASQ    + +P P  + + LI+ FA + L   D+  LSGGH IG A C +F +R+Y   D  ++  FA + + TCP
Sbjct:    9 VLTFLILISLMAVTLNLFPTVEAKKRSRDAPIVKGLSWNFYQKACPKVENIIRKELKKVFKRDIGLAAAILRIHFHDCFVQGCEASVLLAGSASGPGEQSSIPNLTLRQQAFVVINNLRALVQKKCGQVVSCSDILALAARDSVVLSGGPDYAVPLGRRDSLAFASQETTLNNLPPPFFNASQLIADFANRNLNITDLVALSGGHTIGIAHCPSFTDRLYPNQDPTMNQFFANSLKRTCP 248          
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PER55_ARATH (Peroxidase 55 OS=Arabidopsis thaliana GN=PER55 PE=1 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 3.359e-40
Identity = 92/241 (38.17%), Postives = 133/241 (55.19%), Query Frame = 2
Query:   47 PFLDWFMASSISYLFVTLILSIISLLACTSNAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSAR-GFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFARCAAFRNRIYN-------DTNIDPAFATTRRTTC 745
            P + WF+          L+ S+++     SNAQLS  +YA++CP+ + I +  +T    +    A + LR+FFHDCFV GCD SV +  +     EK+A  N++ A  GF+ +   KT +E+ C   VSCADILA+AARD V L+GGP + V LGRRD   +  S    ++P P   +  L+ +FA+ GL+  DM  LSG H IG + C  F NR++N       D  +DP +A      C
Sbjct:   11 PMMMWFLGM--------LLFSMVA----ESNAQLSENYYASTCPSVELIVKQAVTTKFKQTVTTAPATLRMFFHDCFVEGCDASVFIA-SENEDAEKDADDNKSLAGDGFDTVIKAKTAVESQCPGVVSCADILALAARDVVVLVGGPEFKVELGRRDGLVSKASRVTGKLPEPGLDVRGLVQIFASNGLSLTDMIALSGAHTIGSSHCNRFANRLHNFSTFMPVDPTMDPVYAQQLIQAC 238          
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PER18_ARATH (Peroxidase 18 OS=Arabidopsis thaliana GN=PER18 PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.276e-39
Identity = 93/237 (39.24%), Postives = 129/237 (54.43%), Query Frame = 2
Query:   62 FMASSISYLFVTLILSIISLLACTSNAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFARCAAFRNRI---------YNDTNIDPAFATTRRTTC 745
            F +    Y F++ +L +  LL  +S A+LS  FYA SCP  + I R+ +  A +  P     +LRL FHDCFV GCDGSVL+    T    + + P   S  GF VI+++K  LE  C  TVSCADIL +AARD V  LGGP   +P GRRD R +  +     I     ++  +I++F++KGL+  D+ VLSG H IG A C  F +R            D ++D ++A T    C
Sbjct:    5 FFSCKPKYTFLSSLLLL--LLLSSSVAELSFNFYAGSCPGAELIVRNTVRSASSSDPSVLGKLLRLIFHDCFVQGCDGSVLIRGNGT----ERSDPGNASLGGFAVIESVKNILEIFCPGTVSCADILVLAARDAVEALGGPVVPIPTGRRDGRVSMAANVRPNIIDTDFTVDKMINIFSSKGLSVHDLVVLSGAHTIGAAHCNTFNSRFKLDPKGNLELIDASLDNSYAQTLVNKC 235          
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PER50_ARATH (Peroxidase 50 OS=Arabidopsis thaliana GN=PER50 PE=1 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.177e-39
Identity = 92/227 (40.53%), Postives = 127/227 (55.95%), Query Frame = 2
Query:   98 LILSIISLLACTSNAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSAR-GFEVIDAIKTRLEAA--CNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFARCAAFRNRIY---NDTNIDPA----FATTRRTTCP 748
            L+L  + L    S+AQL   FYA SCPN ++I R+ + K V +      + LRL+FHDCFVNGCD SV++  T     EK+   N + A  GF+ +   K  L+A   C   VSCADIL +A RD V L GGP + V LGR D  +++ ++   ++P P+  +  L S+FA  GL+  DM  LSG H +GFA C    NRIY     T +DP     + T  + +CP
Sbjct:   11 LLLLSLCLTLDLSSAQLRRNFYAGSCPNVEQIVRNAVQKKVQQTFTTIPATLRLYFHDCFVNGCDASVMIASTNNNKAEKDHEENLSLAGDGFDTVIKAKEALDAVPNCRNKVSCADILTMATRDVVNLAGGPQYDVELGRLDGLSSTAASVGGKLPHPTDDVNKLTSLFAKNGLSLNDMIALSGAHTLGFAHCTKVFNRIYTFNKTTKVDPTVNKDYVTELKASCP 237          
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PER41_ARATH (Peroxidase 41 OS=Arabidopsis thaliana GN=PER41 PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.177e-39
Identity = 86/230 (37.39%), Postives = 128/230 (55.65%), Query Frame = 2
Query:   65 MASSISYLFVTLILSIISLLACTSNAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRN-SARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFARCAAFRNRIYN--DTNIDPAFATTRRTTC 745
            M+S I+ LFV L+   +  +       L+  +Y  +CP+F +I R+ +T    +QP  AA  LRLFFHDCF+ GCD SVL+   +    E++   N +     F+++  IKT LE +C   VSCADILA A RD V ++GGP + V LGR+D   +        +P  + S+  ++S+F   G T +++  LSGGH IGF+ C  F NRI+   D  ++  FA   +  C
Sbjct:    1 MSSVINVLFVVLVF--VPSIYSAPPPNLTKDYYQKTCPDFNKIVRETVTPKQGQQPTTAAGTLRLFFHDCFMEGCDASVLIATNSFNKAERDDDLNESLPGDAFDIVTRIKTALELSCPGVVSCADILAQATRDLVTMVGGPFYEVKLGRKDGFESKAHKVKGNLPLANQSVPDMLSIFKKNGFTLKELVALSGGHTIGFSHCKEFSNRIFPKVDPELNAKFAGVLKDLC 228          
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PER46_ARATH (Peroxidase 46 OS=Arabidopsis thaliana GN=PER46 PE=2 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.844e-39
Identity = 91/225 (40.44%), Postives = 125/225 (55.56%), Query Frame = 2
Query:   98 LILSIISLLACTSNAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFARCAAFRNRIYNDT---------NIDPAFATTRRTTC 745
            L++ + SLL  TS+A LS  FYA+SC   + + R+ +  A +  P     +LRLFFHDCFV GCD SVL+   +T    + + P   S  GF VID  K  +E  C ATVSCADI+A+AARD V   GGP   +P GRRD + +  +     I     +L  +I  F++KGL+ QD+ VLSG H IG + C AF  R   D+         ++D ++A T    C
Sbjct:   15 LLMFLSSLL--TSSANLSFNFYASSCSVAEFLVRNTVRSATSSDPTIPGKLLRLFFHDCFVQGCDASVLIQGNST----EKSDPGNASLGGFSVIDTAKNAIENLCPATVSCADIVALAARDAVEAAGGPVVEIPTGRRDGKESMAANVRPNIIDTDFTLDQMIDAFSSKGLSIQDLVVLSGAHTIGASHCNAFNGRFQRDSKGNFEVIDASLDNSYAETLMNKC 233          
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PERN1_TOBAC (Peroxidase N1 OS=Nicotiana tabacum GN=poxN1 PE=1 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 3.714e-39
Identity = 92/233 (39.48%), Postives = 129/233 (55.36%), Query Frame = 2
Query:   71 SSISYLFVTLILSIISLLACTSNAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFARCAAFRNRIYN-------DTNIDPAFATTRRTTCP 748
            + ++   V L+L+I   +      ++   FY+++CP  + I +  +       P  A  ILR+ FHDCFV GCDGS+L++ +     E+ A PNRN  +GF+VI+  KT++EA C   VSCADILA+AARD V    G TW+VP GRRD R  S++A    +P    S+      F  KGL  QD+  L+G H IG A CA  R+R++N       D +ID  F    R  CP
Sbjct:    9 NKMAMFMVILVLAIDVTMVLGQGTRVG--FYSSTCPRAESIVQSTVRAHFQSDPTVAPGILRMHFHDCFVLGCDGSILIEGS---DAERTAIPNRN-LKGFDVIEDAKTQIEAICPGVVSCADILALAARDSVVATRGLTWSVPTGRRDGR-VSRAADAGDLPAFFDSVDIQKRKFLTKGLNTQDLVALTGAHTIGTAGCAVIRDRLFNFNSTGGPDPSIDATFLPQLRALCP 234          
The following BLAST results are available for this feature:
BLAST of CX078552 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
PER43_ARATH8.840e-4141.07Peroxidase 43 OS=Arabidopsis thaliana GN=PER43 PE=... [more]
PER62_ARATH1.508e-4043.30Peroxidase 62 OS=Arabidopsis thaliana GN=PER62 PE=... [more]
PER73_ARATH2.572e-4040.09Peroxidase 73 OS=Arabidopsis thaliana GN=PER73 PE=... [more]
PER12_ARATH2.572e-4040.42Peroxidase 12 OS=Arabidopsis thaliana GN=PER12 PE=... [more]
PER55_ARATH3.359e-4038.17Peroxidase 55 OS=Arabidopsis thaliana GN=PER55 PE=... [more]
PER18_ARATH1.276e-3939.24Peroxidase 18 OS=Arabidopsis thaliana GN=PER18 PE=... [more]
PER50_ARATH2.177e-3940.53Peroxidase 50 OS=Arabidopsis thaliana GN=PER50 PE=... [more]
PER41_ARATH2.177e-3937.39Peroxidase 41 OS=Arabidopsis thaliana GN=PER41 PE=... [more]
PER46_ARATH2.844e-3940.44Peroxidase 46 OS=Arabidopsis thaliana GN=PER46 PE=... [more]
PERN1_TOBAC3.714e-3939.48Peroxidase N1 OS=Nicotiana tabacum GN=poxN1 PE=1 S... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_9G02_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-9G02-M3-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX078552 ID=CX078552; Name=CX078552; organism=Citrus sinensis; type=EST; length=751bp
AATTAAACCGCTTGCCGCTTCTAGCTAGCTCATCTGCTTTAACTTTCCAT
TTTTGGATTGGTTCATGGCATCTTCAATTTCTTATTTGTTTGTTACACTT
ATACTCTCAATTATATCTCTTCTAGCTTGCACCTCCAATGCGCAACTTTC
TCCAACCTTTTATGCAACATCTTGCCCCAATTTTCAAAGAATCGCGAGGG
ATGAAATGACCAAAGCTGTTAATAGACAACCGCGTAATGCTGCCTCTATT
CTTCGCCTCTTCTTCCATGACTGCTTCGTTAATGGCTGCGATGGGTCGGT
ACTACTAGATGACACAGCCACATTCACCGGCGAGAAGAATGCAGGACCAA
ACAGAAACTCTGCTAGGGGTTTTGAAGTGATTGACGCCATTAAAACTCGT
CTGGAAGCAGCTTGCAACGCCACCGTTTCATGTGCCGACATCCTTGCTGT
TGCAGCCCGAGACGGTGTCGCCTTGCTTGGAGGACCGACTTGGACGGTAC
CGCTCGGCCGGCGAGATGCAAGAACGGCCAGTCAGAGTGCAGCCAATAGC
CAAATCCCTGGACCATCCTCCAGCCTGGCAACACTCATATCAATGTTTGC
AGCCAAAGGCCTGACCGCCCAAGACATGACAGTCCTCTCCGGCGGCCACG
CCATCGGATTCGCTCGATGCGCCGCCTTCCGGAACCGCATATACAACGAC
ACCAACATTGACCCAGCTTTTGCAACCACCAGAAGAACAACCTGCCCGGC
T
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