CX078552

Overview
NameCX078552
Unique NameCX078552
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length751
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PER35_ARATH (Peroxidase 35 OS=Arabidopsis thaliana GN=PER35 PE=1 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 9.148e-38
Identity = 87/223 (39.01%), Postives = 125/223 (56.05%), Query Frame = 2
Query:  110 IISLLACTSNAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSAR-GFEVIDAIKTRLEA--ACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFARCAAFRNRIYN-------DTNIDPAFATTRRTTCP 748
            IIS+   T+ AQLS  FY+ +CPN ++I R+ + K + +      + LRLFFHDCFVNGCD SV++  T     EK+   N + A  GF+V+   K  L++  +C   VSCADIL +A RD V   GGP++ V LGR D   ++ S+    +PGPS ++  L ++F    LT +DM  LS  H +GFA C     RI+        D  ++ A+A   +  CP
Sbjct:   15 IISVFPDTTTAQLSRGFYSKTCPNVEQIVRNAVQKKIKKTFVAVPATLRLFFHDCFVNGCDASVMIQSTPKNKAEKDHPDNISLAGDGFDVVIQAKKALDSNPSCRNKVSCADILTLATRDVVVAAGGPSYEVELGRFDGLVSTASSVEGNLPGPSDNVDKLNALFTKNKLTQEDMIALSAAHTLGFAHCGKVFKRIHKFNGINSVDPTLNKAYAIELQKACP 237          
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PER16_ARATH (Peroxidase 16 OS=Arabidopsis thaliana GN=PER16 PE=1 SV=2)

HSP 1 Score: 156.377 bits (394), Expect = 1.560e-37
Identity = 96/238 (40.34%), Postives = 127/238 (53.36%), Query Frame = 2
Query:   65 MASSISYLFVTLILSIISLLACTSNAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSAR-GFEVIDAIKTRLEAA--CNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFARCAAFRNRIYN-------DTNIDPAFATTRRTTCP 748
            M +  S+  V L+L   S    +  AQL   FY  SCPN + I R+ + +   +    A + LRLFFHDCFV GCD S+LL   +    EK+   +++ A  GF+ +   K  L+    C   VSCADILA+A RD V L GGP + V LGRRD R ++ ++    +P PS  L  L +MFA  GL+  DM  LSG H IGFA C  F  RIYN       D  ++  +A   R  CP
Sbjct:    1 MKNQSSFSIVALLLIFFS---SSVFAQLQTNFYRKSCPNVETIVRNAVRQKFQQTFVTAPATLRLFFHDCFVRGCDASILLASPS----EKDHPDDKSLAGDGFDTVAKAKQALDRDPNCRNKVSCADILALATRDVVVLTGGPNYPVELGRRDGRLSTVASVQHSLPQPSFKLDQLNTMFARHGLSQTDMIALSGAHTIGFAHCGKFSKRIYNFSPKRPIDPTLNIRYALQLRQMCP 231          
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PER2_CUCSA (Peroxidase 2 (Fragment) OS=Cucumis sativus PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 5.929e-37
Identity = 83/200 (41.50%), Postives = 110/200 (55.00%), Query Frame = 2
Query:  155 TFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFARCAAFRNRI---YNDTNIDPAFATTRRTTC 745
            TFY  SCP+   I R  + +A+    R  A ++RL FHDCFVNGCDGSVLL+D      E  A P   +  GF +++ IK  +E AC   VSCADILA+A+   V L GGP W V LGRRD+R A+   A   +P P  ++  L   F    L + D+  LSG H  G +RC  F  R+     D+ ++P +A   R  C
Sbjct:    1 TFYDESCPDVSNIVRRVVQQALVSDERAGARLIRLHFHDCFVNGCDGSVLLEDQPGVVSEL-AAPGNANITGFNIVNNIKAAVEKACPGVVSCADILAIASVGSVNLAGGPCWEVQLGRRDSRRANLQGAIDGLPSPFENVTQLKRKFDRVDLDSTDLVALSGAHTFGKSRCQFFDRRLNVSNPDSTLNPRYAQQLRQAC 199          
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PER65_ARATH (Peroxidase 65 OS=Arabidopsis thaliana GN=PER65 PE=2 SV=2)

HSP 1 Score: 154.066 bits (388), Expect = 7.744e-37
Identity = 79/222 (35.59%), Postives = 121/222 (54.50%), Query Frame = 2
Query:   92 VTLILSIISLLACTSNAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRN-SARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFARCAAFRNRIYN---DTNIDPAFATTRRTTC 745
            +   L++++ +     A L   +Y  +CP+F +I R+ +T    +QP  AA  LRLFFHDCF+ GCD SVL+   +    E++   N +     F+++  IKT LE +C   VSCADILA A RD V ++GGP + V LGR+D   +        +P  + ++  +  +F   G + ++M  LSG H IGF+ C  F +R+Y    D  I+P FA   +  C
Sbjct:   15 ILFCLAVVAPIISADVAILRTDYYQKTCPDFHKIVREAVTTKQVQQPTTAAGTLRLFFHDCFLEGCDASVLIATNSFNKAERDDDLNDSLPGDAFDIVTRIKTALELSCPGVVSCADILAQATRDLVTMVGGPYFDVKLGRKDGFESKAHKVRGNVPMANQTVPDIHGIFKKNGFSLREMVALSGAHTIGFSHCKEFSDRLYGSRADKEINPRFAAALKDLC 236          
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PER45_ARATH (Peroxidase 45 OS=Arabidopsis thaliana GN=PER45 PE=1 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.843e-36
Identity = 86/222 (38.74%), Postives = 124/222 (55.86%), Query Frame = 2
Query:  110 IISLLACTSNAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAA--CNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFARCAAFRNRIYN---DTNIDPA----FATTRRTTCP 748
            ++ LL+   +AQL   FY  SCPN + I R+ + +   +    A + LRLFFHDCFV GCD S+++   A+ +   +      +  GF+ +   K  +++   C   VSCADILA+A R+ V L GGP++ V LGRRD R +++++  SQ+P P  +L  L  MF+  GL+  DM  LSG H IGFA C     RIYN    T IDP+    +    +  CP
Sbjct:   15 LLLLLSSCVSAQLRTGFYQNSCPNVETIVRNAVRQKFQQTFVTAPATLRLFFHDCFVRGCDASIMI---ASPSERDHPDDMSLAGDGFDTVVKAKQAVDSNPNCRNKVSCADILALATREVVVLTGGPSYPVELGRRDGRISTKASVQSQLPQPEFNLNQLNGMFSRHGLSQTDMIALSGAHTIGFAHCGKMSKRIYNFSPTTRIDPSINRGYVVQLKQMCP 233          
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PER29_ARATH (Peroxidase 29 OS=Arabidopsis thaliana GN=PER29 PE=2 SV=2)

HSP 1 Score: 151.754 bits (382), Expect = 3.843e-36
Identity = 84/228 (36.84%), Postives = 127/228 (55.70%), Query Frame = 2
Query:   83 YLFVTLILS-IISLLACTSNAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDA-RTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFARC----AAFRNRIYNDTNIDPAFATTRRTTCP 748
            +L ++L+ S II     T+N  LS ++Y  +CP  + I R  ++      P + A++LRL FHDC V GCD S+LL+        +         R  +++ +IKT LE  C   VSC+D++ +AARD VAL GGP  +VPLGR+D+  T S+  A+S++P  ++ + T +S+FA KG+T ++   + G H IG   C    + F N      N+DP F T  R  CP
Sbjct:   16 FLVMSLLCSCIIGDQMETNNEGLSYSYYEKTCPKVEEIVRSSLSSMFILDPTSPAALLRLMFHDCQVQGCDASILLEPIRDQQFTELDSAKNFGIRKRDLVGSIKTSLELECPKQVSCSDVIILAARDAVALTGGPLISVPLGRKDSLSTPSKHVADSELPPSTADVDTTLSLFANKGMTIEESVAIMGAHTIGVTHCNNVLSRFDNANATSENMDPRFQTFLRVACP 243          
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PER6_ARATH (Peroxidase 6 OS=Arabidopsis thaliana GN=PER6 PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 5.020e-36
Identity = 81/223 (36.32%), Postives = 120/223 (53.81%), Query Frame = 2
Query:   98 LILSIISLLACTSNAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRN-SARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFARCAAFRNRIYNDTN------IDPAFATTRRTTC 745
            L L I+    C   A LS  +Y  +CP F+      +T      P  A   LRLFFHDC V+GCD S+L+  T   T E++A  NR+     F+VI  IKT +E  C   VSC+DIL  A R  ++++GGP   V  GR+D+  +  +    ++  P+ ++  +IS+F + GLT Q+M  L G H IGF+ C  F +RI+N ++      ++P +A   R  C
Sbjct:    6 LCLFILVSSPCLLQANLSSDYYTKTCPEFEETLVQIVTDKQIAAPTTAVGTLRLFFHDCMVDGCDASILVASTPRKTSERDADINRSLPGDAFDVITRIKTAVELKCPNIVSCSDILVGATRSLISMVGGPRVNVKFGRKDSLVSDMNRVEGKLARPNMTMDHIISIFESSGLTVQEMVALVGAHTIGFSHCKEFASRIFNKSDQNGPVEMNPKYAAELRKLC 228          
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PER19_ARATH (Peroxidase 19 OS=Arabidopsis thaliana GN=PER19 PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 5.020e-36
Identity = 86/245 (35.10%), Postives = 133/245 (54.29%), Query Frame = 2
Query:   65 MASSISYLFVTLILSIISLLACTS-------NAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDT--ATFTGEKNAGPNRN-SARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFARCAAFRNRIYN-------DTNIDPAFATTRRTTCP 748
            ++S   +LF+T  + I  +   TS       + +LS  +Y+  CP  + +     ++     P +A + +RLFFHDCFV GCDGS+L++    +    E+ A  N+     GF+ I   K  +E+ C + VSC+DILA+AARD + L GGP + V  GR D + ++       IP  +S++  LI +FA+KGLT +++ VLSG H IGFA C  F  R+Y+       D ++D       R +CP
Sbjct:    8 LSSIFFFLFLTSTILISPVQPTTSKPPAPRPHRELSADYYSKKCPQLETLVGSVTSQRFKEVPISAPATIRLFFHDCFVEGCDGSILIETKKGSKKLAEREAYENKELREEGFDSIIKAKALVESHCPSLVSCSDILAIAARDFIHLAGGPYYQVKKGRWDGKRSTAKNVPPNIPRSNSTVDQLIKLFASKGLTVEELVVLSGSHTIGFAHCKNFLGRLYDYKGTKRPDPSLDQRLLKELRMSCP 252          
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PER13_ARATH (Peroxidase 13 OS=Arabidopsis thaliana GN=PER13 PE=1 SV=2)

HSP 1 Score: 150.984 bits (380), Expect = 6.556e-36
Identity = 92/207 (44.44%), Postives = 118/207 (57.00%), Query Frame = 2
Query:  134 SNAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLS-GGHAIGFARCAAFRNRI-YNDTNIDPAFATTRRTTCP 748
            S AQL   FY+ +CP+ + I RD + +AV   P  AA +LRL FHDCFV GCDGS+L+        E+ A  N   A GF+VID  K+ LE  C   VSCADI+A+AARD +A   GP + VP GRRD   A+   A + +P    S+ TL S F  KGL+ QD+ +LS G H IG   C     R+   D  I+P F    R+ CP
Sbjct:   20 SAAQLQFGFYSETCPSAESIVRDVVQQAVTNDPGKAAVLLRLQFHDCFVEGCDGSILIKHGGN-DDERFAAGNAGVA-GFDVIDEAKSELERFCPGVVSCADIVALAARDAIAEAKGPFYEVPTGRRDGLIANVDHAKN-LPDVQDSINTLKSKFREKGLSDQDLVLLSAGAHTIGTTACFFVIPRLDAQDPTINPEFFQILRSKCP 223          
BLAST of CX078552 vs. ExPASy Swiss-Prot
Match: PER1_SORBI (Cationic peroxidase SPC4 (Fragment) OS=Sorghum bicolor PE=1 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 3.254e-35
Identity = 89/207 (43.00%), Postives = 119/207 (57.49%), Query Frame = 2
Query:   65 MASSISYLFVTLILSIISLLACTSNAQLSPT-------FYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRN-SARGFEVIDAIKTRLEAACNAT-VSCADILAVAARDGVALLGGPTWTVPLGRRD-ARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAI 655
            +A++ +   V LI S  +  A   NA+  P        FY  SCP  + I R  +  AV R    AA +LRL FHDCFV GCD SVLLD +AT  GE+ A PN       F+ I+ I  RL   C  T VSC+D+LA+AARD V + GGP++ VPLGRRD A  A+Q    S +P P++++  L+++ +   L A D+  LSGGH I
Sbjct:    7 LAAAAAVAAVVLICSSSTATAADGNARQPPLAPGLSFDFYKRSCPKAESIVRSFVQDAVRRDVGLAAGLLRLHFHDCFVQGCDASVLLDGSATGPGEQQAPPNLTLRPTAFKAINDIHDRLHKECGGTVVSCSDVLALAARDSVVVSGGPSYKVPLGRRDSASFATQQDVLSGLPPPTAAVPALLAVLSKINLDATDLVALSGGHTI 213          
The following BLAST results are available for this feature:
BLAST of CX078552 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
PER35_ARATH9.148e-3839.01Peroxidase 35 OS=Arabidopsis thaliana GN=PER35 PE=... [more]
PER16_ARATH1.560e-3740.34Peroxidase 16 OS=Arabidopsis thaliana GN=PER16 PE=... [more]
PER2_CUCSA5.929e-3741.50Peroxidase 2 (Fragment) OS=Cucumis sativus PE=2 SV... [more]
PER65_ARATH7.744e-3735.59Peroxidase 65 OS=Arabidopsis thaliana GN=PER65 PE=... [more]
PER45_ARATH3.843e-3638.74Peroxidase 45 OS=Arabidopsis thaliana GN=PER45 PE=... [more]
PER29_ARATH3.843e-3636.84Peroxidase 29 OS=Arabidopsis thaliana GN=PER29 PE=... [more]
PER6_ARATH5.020e-3636.32Peroxidase 6 OS=Arabidopsis thaliana GN=PER6 PE=2 ... [more]
PER19_ARATH5.020e-3635.10Peroxidase 19 OS=Arabidopsis thaliana GN=PER19 PE=... [more]
PER13_ARATH6.556e-3644.44Peroxidase 13 OS=Arabidopsis thaliana GN=PER13 PE=... [more]
PER1_SORBI3.254e-3543.00Cationic peroxidase SPC4 (Fragment) OS=Sorghum bic... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_9G02_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-9G02-M3-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX078552 ID=CX078552; Name=CX078552; organism=Citrus sinensis; type=EST; length=751bp
AATTAAACCGCTTGCCGCTTCTAGCTAGCTCATCTGCTTTAACTTTCCAT
TTTTGGATTGGTTCATGGCATCTTCAATTTCTTATTTGTTTGTTACACTT
ATACTCTCAATTATATCTCTTCTAGCTTGCACCTCCAATGCGCAACTTTC
TCCAACCTTTTATGCAACATCTTGCCCCAATTTTCAAAGAATCGCGAGGG
ATGAAATGACCAAAGCTGTTAATAGACAACCGCGTAATGCTGCCTCTATT
CTTCGCCTCTTCTTCCATGACTGCTTCGTTAATGGCTGCGATGGGTCGGT
ACTACTAGATGACACAGCCACATTCACCGGCGAGAAGAATGCAGGACCAA
ACAGAAACTCTGCTAGGGGTTTTGAAGTGATTGACGCCATTAAAACTCGT
CTGGAAGCAGCTTGCAACGCCACCGTTTCATGTGCCGACATCCTTGCTGT
TGCAGCCCGAGACGGTGTCGCCTTGCTTGGAGGACCGACTTGGACGGTAC
CGCTCGGCCGGCGAGATGCAAGAACGGCCAGTCAGAGTGCAGCCAATAGC
CAAATCCCTGGACCATCCTCCAGCCTGGCAACACTCATATCAATGTTTGC
AGCCAAAGGCCTGACCGCCCAAGACATGACAGTCCTCTCCGGCGGCCACG
CCATCGGATTCGCTCGATGCGCCGCCTTCCGGAACCGCATATACAACGAC
ACCAACATTGACCCAGCTTTTGCAACCACCAGAAGAACAACCTGCCCGGC
T
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