EY680023

Overview
NameEY680023
Unique NameEY680023
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length893
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680023 vs. ExPASy Swiss-Prot
Match: DRL19_ARATH (Putative disease resistance protein At1g63350 OS=Arabidopsis thaliana GN=At1g63350 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.311e-11
Identity = 53/159 (33.33%), Postives = 81/159 (50.94%), Query Frame = 2
Query:  125 LSSNKLKSCIRSLYLELTGDTTSIIDATAFADLNHLNELRIDNGI---ELEELKIDYTEIVR-KRREPFVFRSLQRVTIAECHKLKDVTFLVFAPNLKSLRLFYCGAMEEIISVGKFAETPEMMGHISPFENLQMLDLQGLPHLKSIFWKPIAFHSSER 589
            LSS++L SCIR  +L+++ ++             + N  RI   +    L+E  I++      K      F SL  V ++ C +L+++TFL+FAPNLK L +     +E+II+  K A   E  G I PF  L  L L  L  LK+I+W P+ F   E+
Sbjct:  677 LSSHRLMSCIR--FLKISNNSN-----------RNRNSSRISLPVTMDRLQEFTIEHCHTSEIKMGRICSFSSLIEVNLSNCRRLRELTFLMFAPNLKRLHVVSSNQLEDIINKEK-AHDGEKSG-IVPFPKLNELHLYNLRELKNIYWSPLPFPCLEK 820          
BLAST of EY680023 vs. ExPASy Swiss-Prot
Match: DRL23_ARATH (Putative disease resistance protein At4g10780 OS=Arabidopsis thaliana GN=At4g10780 PE=2 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 3.512e-11
Identity = 39/109 (35.78%), Postives = 60/109 (55.05%), Query Frame = 2
Query:  260 ELEELKIDYTEIVRKRREPFVFRSLQRVTIAECHKLKDVTFLVFAPNLKSLRLFYCGAMEEIIS----VGKFAETPEMMGHISPFENLQMLDLQGLPHLKSIFWKPIAF 574
            E+ E++I+          P  F +L +V I  C  LKD+T+L+FAPN+  L +     ++E+IS     G   E  + +  I PF+ LQ+L L  LP LKSI+W  ++F
Sbjct:  720 EISEIEIERLTWNTNPTSPCFF-NLSQVIIHVCSSLKDLTWLLFAPNITYLMIEQLEQLQELISHAKATGVTEEEQQQLHKIIPFQKLQILHLSSLPELKSIYWISLSF 827          

HSP 2 Score: 23.8682 bits (50), Expect = 3.512e-11
Identity = 12/26 (46.15%), Postives = 15/26 (57.69%), Query Frame = 3
Query:  567 LPFTHLKEMEVLRCDRLEKLPLHSNS 644
            L F  L  + V RC +L KLPL S +
Sbjct:  825 LSFPCLSGIYVERCPKLRKLPLDSKT 850          
BLAST of EY680023 vs. ExPASy Swiss-Prot
Match: RFL1_ARATH (Disease resistance protein RFL1 OS=Arabidopsis thaliana GN=RFL1 PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 7.375e-11
Identity = 38/84 (45.24%), Postives = 52/84 (61.90%), Query Frame = 2
Query:  323 FRSLQRVTIAECHKLKDVTFLVFAPNLKSLRLFYCGAMEEIISVGKFAETPEMMGHISPFENLQMLDLQGLPHLKSIFWKPIAF 574
            F +L  V I  C  LKD+T+L+FAPNL +LR++ C  +E+IIS  K A   E    I PF+ L+ L+L  L  LKSI+W  + F
Sbjct:  742 FSNLSNVRIEGCDGLKDLTWLLFAPNLINLRVWGCKHLEDIISKEKAASVLEK--EILPFQKLECLNLYQLSELKSIYWNALPF 823          
The following BLAST results are available for this feature:
BLAST of EY680023 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
DRL19_ARATH3.311e-1133.33Putative disease resistance protein At1g63350 OS=A... [more]
DRL23_ARATH3.512e-1135.78Putative disease resistance protein At4g10780 OS=A... [more]
RFL1_ARATH7.375e-1145.24Disease resistance protein RFL1 OS=Arabidopsis tha... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-006-F02-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680023 ID=EY680023; Name=EY680023; organism=Citrus sinensis; type=EST; length=893bp
TGAAGCACCAGAAGACAGCGTTTTATTTGGTGGGGGTGAAGTTTTGATAC
AGGAATTGCTCGGTTTGAAATATTTAGAGGTATTGGAGTTGACCTTGGGA
AGTTATCATGCTCTCCAAATTCTTTTGAGCTCAAATAAGTTAAAAAGTTG
TATTCGATCTCTTTACCTCGAGTTGACCGGAGATACAACGTCAATTATTG
ATGCTACGGCTTTCGCAGATCTAAACCACCTCAATGAATTACGGATTGAT
AATGGTATTGAGTTGGAAGAGTTGAAGATTGATTATACGGAGATAGTACG
AAAAAGGCGGGAACCTTTTGTTTTCCGCAGCCTTCAACGTGTTACCATAG
CGGAGTGCCATAAATTGAAAGATGTGACATTCCTCGTTTTTGCTCCAAAC
CTCAAGTCTCTTCGGCTATTCTATTGCGGTGCTATGGAAGAAATAATCAG
CGTCGGAAAATTTGCTGAGACTCCTGAGATGATGGGACATATAAGCCCTT
TTGAAAATCTCCAAATGCTTGATTTACAAGGTTTGCCACATTTGAAGAGC
ATCTTCTGGAAGCCCATTGCCTTTCACTCATCTGAAAGAAATGGAGGTAC
TTAGGTGCGATCGGCTTGAAAAGCTTCCACTCCATTCCAACAGTGCAAAG
GGAGCGCAAATTTGTTATTCCTGGGAAAAAAAAACGGGTGGAACCAACTT
CAATGGGGAGGAAGAACCCCCCCCAAATGGCTTTTCGTTCCGGTTTTAAA
AGTGAAGGCTTTTTTTATATCCTTATTCGGGGAAAAGGGGATTTTATTTT
CCCTCGCAAAAAAAAAAAACAAAAAAAAAACAAAAAAACCCAAAATAAAG
GGCTCCCTAAATATTTTCCGCGAAAAAAAAAAAAAAAAATATA
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