EY702434

Overview
NameEY702434
Unique NameEY702434
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length721
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702434 vs. ExPASy Swiss-Prot
Match: ACT1_SOYBN (Actin-1 OS=Glycine max GN=SAC1 PE=3 SV=2)

HSP 1 Score: 288.5 bits (737), Expect = 2.437e-77
Identity = 141/159 (88.68%), Postives = 152/159 (95.60%), Query Frame = 2
Query:   11 AYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF 487
            AYIALD EQELET++TSS+VEKSYELPDGQVITIGAERF CP VL+QPSM+GME++GIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFP IADRMSKEISALAPSSMKIKVVAP ERK+ VWIGGSILASLSTFQQMWI K+EYDESGPSIVH+KCF
Sbjct:  219 AYIALDCEQELETSETSSSVEKSYELPDGQVITIGAERFGCPGVLYQPSMVGMEASGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPSIADRMSKEISALAPSSMKIKVVAPSERKFGVWIGGSILASLSTFQQMWIXKAEYDESGPSIVHKKCF 377          
BLAST of EY702434 vs. ExPASy Swiss-Prot
Match: ACT_CHLRE (Actin OS=Chlamydomonas reinhardtii PE=2 SV=1)

HSP 1 Score: 288.115 bits (736), Expect = 3.183e-77
Identity = 138/158 (87.34%), Postives = 152/158 (96.20%), Query Frame = 2
Query:   14 YIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF 487
            Y+ALD+EQE+ TA +SSA+EK+YELPDGQ+ITIG ERFRCPEVLF P+MIGME+ GIH+TT+NSIMKCDVDIRKDLY NIVLSGG+TMFPGIADRMSKEI+ALAPS+MKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF
Sbjct:  220 YVALDFEQEMATALSSSALEKTYELPDGQMITIGNERFRCPEVLFNPNMIGMEAVGIHDTTFNSIMKCDVDIRKDLYNNIVLSGGTTMFPGIADRMSKEITALAPSAMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF 377          
BLAST of EY702434 vs. ExPASy Swiss-Prot
Match: ACT1_ACACA (Actin-1 OS=Acanthamoeba castellanii PE=3 SV=1)

HSP 1 Score: 288.115 bits (736), Expect = 3.183e-77
Identity = 136/158 (86.08%), Postives = 150/158 (94.94%), Query Frame = 2
Query:   14 YIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF 487
            Y+ALD+EQE+ TA +SSA+EKSYELPDGQVITIG ERFR PE LFQPS +GMESAGIHETTYNSIMKCDVDIRKDLYGN+VLSGG+TMFPGIADRM KE++ALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  218 YVALDFEQEMHTAASSSALEKSYELPDGQVITIGNERFRAPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLSGGTTMFPGIADRMQKELTALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPSIVHRKCF 375          
BLAST of EY702434 vs. ExPASy Swiss-Prot
Match: ACTC_HELTI (Actin, cytoplasmic OS=Helisoma trivolvis PE=3 SV=1)

HSP 1 Score: 287.345 bits (734), Expect = 5.430e-77
Identity = 135/158 (85.44%), Postives = 149/158 (94.30%), Query Frame = 2
Query:   14 YIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF 487
            Y+ALD+EQE++TA TSS++EKSYELPDGQVITIG ERFRCPE ++QPS +GMESAGIHETTYNSIMKCDVDIRKDLY N VLSGGSTMFPGIADRM KEI+ALAP +MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  219 YVALDFEQEMQTASTSSSLEKSYELPDGQVITIGNERFRCPEAMYQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376          
BLAST of EY702434 vs. ExPASy Swiss-Prot
Match: ACTC_HALRO (Actin, nonmuscle OS=Halocynthia roretzi GN=CA1 PE=3 SV=1)

HSP 1 Score: 287.345 bits (734), Expect = 5.430e-77
Identity = 136/159 (85.53%), Postives = 148/159 (93.08%), Query Frame = 2
Query:   11 AYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF 487
            AY+ALD+E E++TA TSS++EKSYELPDGQVIT+G ERFRCPE LFQPS +GMESAGIHETTYNSIMKCDVDIRKDLY N VLSGGSTMFPGIADRM KEI ALAP +MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  218 AYVALDFETEMQTAATSSSIEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEIVALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376          
BLAST of EY702434 vs. ExPASy Swiss-Prot
Match: ACTC_BIOTE (Actin, cytoplasmic OS=Biomphalaria tenagophila PE=3 SV=1)

HSP 1 Score: 287.345 bits (734), Expect = 5.430e-77
Identity = 135/158 (85.44%), Postives = 149/158 (94.30%), Query Frame = 2
Query:   14 YIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF 487
            Y+ALD+EQE++TA TSS++EKSYELPDGQVITIG ERFRCPE +FQPS +GME+AGIHETTYNSIMKCDVDIRKDLY N VLSGGSTMFPGIADRM KEI+ALAP +MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  219 YVALDFEQEMQTASTSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMEAAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376          
BLAST of EY702434 vs. ExPASy Swiss-Prot
Match: ACTC_BIOAL (Actin, cytoplasmic OS=Biomphalaria alexandrina PE=3 SV=1)

HSP 1 Score: 287.345 bits (734), Expect = 5.430e-77
Identity = 135/158 (85.44%), Postives = 149/158 (94.30%), Query Frame = 2
Query:   14 YIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF 487
            Y+ALD+EQE++TA TSS++EKSYELPDGQVITIG ERFRCPE +FQPS +GME+AGIHETTYNSIMKCDVDIRKDLY N VLSGGSTMFPGIADRM KEI+ALAP +MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  219 YVALDFEQEMQTASTSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMEAAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376          
BLAST of EY702434 vs. ExPASy Swiss-Prot
Match: ACTC_PISOC (Actin, cytoplasmic OS=Pisaster ochraceus PE=3 SV=1)

HSP 1 Score: 286.96 bits (733), Expect = 7.092e-77
Identity = 135/158 (85.44%), Postives = 149/158 (94.30%), Query Frame = 2
Query:   14 YIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF 487
            Y+ALD+EQE++TA +SS++EKSYELPDGQVITIG ERFRCPE LFQPS +GMESAGIHETTYNSIMKCDVDIRKDLY N VLSGGSTMFPGIADRM KE++ALAP +MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  219 YVALDFEQEMQTAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEVTALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376          
BLAST of EY702434 vs. ExPASy Swiss-Prot
Match: ACTC_BIOPF (Actin, cytoplasmic OS=Biomphalaria pfeifferi PE=3 SV=1)

HSP 1 Score: 286.96 bits (733), Expect = 7.092e-77
Identity = 136/158 (86.08%), Postives = 148/158 (93.67%), Query Frame = 2
Query:   14 YIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF 487
            Y+ALD+EQE+ TA TSS++EKSYELPDGQVITIG ERFRCPE +FQPS +GMESAGIHETTYNSIMKCDVDIRKDLY N VLSGGSTMFPGIADRM KEI+ALAP +MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  219 YVALDFEQEMHTAATSSSLEKSYELPDGQVITIGNERFRCPEAVFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376          
BLAST of EY702434 vs. ExPASy Swiss-Prot
Match: ACTC_BIOOB (Actin, cytoplasmic OS=Biomphalaria obstructa PE=3 SV=1)

HSP 1 Score: 286.189 bits (731), Expect = 1.210e-76
Identity = 135/158 (85.44%), Postives = 149/158 (94.30%), Query Frame = 2
Query:   14 YIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF 487
            Y+ALD+EQE++TA +SS++EKSYELPDGQVITIG ERFRCPE LFQPS +GME+AGIHETTYNSIMKCDVDIRKDLY N VLSGGSTMFPGIADRM KEI+ALAP +MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  219 YVALDFEQEMQTATSSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEAAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376          
The following BLAST results are available for this feature:
BLAST of EY702434 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 479
Match NameE-valueIdentityDescription
ACT1_SOYBN2.437e-7788.68Actin-1 OS=Glycine max GN=SAC1 PE=3 SV=2[more]
ACT_CHLRE3.183e-7787.34Actin OS=Chlamydomonas reinhardtii PE=2 SV=1[more]
ACT1_ACACA3.183e-7786.08Actin-1 OS=Acanthamoeba castellanii PE=3 SV=1[more]
ACTC_HELTI5.430e-7785.44Actin, cytoplasmic OS=Helisoma trivolvis PE=3 SV=1[more]
ACTC_HALRO5.430e-7785.53Actin, nonmuscle OS=Halocynthia roretzi GN=CA1 PE=... [more]
ACTC_BIOTE5.430e-7785.44Actin, cytoplasmic OS=Biomphalaria tenagophila PE=... [more]
ACTC_BIOAL5.430e-7785.44Actin, cytoplasmic OS=Biomphalaria alexandrina PE=... [more]
ACTC_PISOC7.092e-7785.44Actin, cytoplasmic OS=Pisaster ochraceus PE=3 SV=1[more]
ACTC_BIOPF7.092e-7786.08Actin, cytoplasmic OS=Biomphalaria pfeifferi PE=3 ... [more]
ACTC_BIOOB1.210e-7685.44Actin, cytoplasmic OS=Biomphalaria obstructa PE=3 ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-701-006-H08-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702434 ID=EY702434; Name=EY702434; organism=Citrus sinensis; type=EST; length=721bp
CCACGCGTCCGCATACATTGCCCTTGATTATGAACAAGAATTAGAAACCG
CCAAGACCAGCTCTGCTGTTGAAAAGAGCTATGAGTTACCAGATGGTCAG
GTGATCACCATTGGTGCTGAGCGTTTTAGATGCCCAGAAGTCCTTTTCCA
ACCATCAATGATCGGTATGGAGTCTGCTGGTATTCATGAAACAACTTACA
ACTCCATAATGAAATGTGATGTTGATATTAGGAAGGATCTGTATGGGAAC
ATTGTACTTAGTGGCGGTTCCACCATGTTCCCTGGTATTGCTGATAGAAT
GAGCAAAGAAATCAGTGCATTAGCACCAAGCAGCATGAAGATTAAGGTGG
TTGCTCCTCCCGAGAGGAAATATAGTGTCTGGATAGGAGGATCCATTTTG
GCATCCCTCAGCACTTTCCAGCAAATGTGGATTGCCAAATCTGAGTATGA
TGAGTCTGGCCCTTCAATAGTGCACAGGAAATGCTTCTGATCAGGAGCAA
ATATGGACTGGAGCATGGTGCTATTTTAAAACCAAAATGCTGCTTGCATT
TTCTATTTTAAAACCAAAATGCTGCTTGCATTTTCATTCATTTTATTGCC
TTTCTTGGCATTCTTCATTTCAACGTGTGGACAACAACCTGGAAAGAACA
TAATCGTTGCTGTACTATTTCCAAATTTTTATCCCTTTTTCTCAGTAGTG
ATAAATTGTTACCCCCTCAAT
back to top