EY702434

Overview
NameEY702434
Unique NameEY702434
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length721
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY702434 vs. ExPASy Swiss-Prot
Match: ACTC_BRAFL (Actin, cytoplasmic OS=Branchiostoma floridae PE=2 SV=1)

HSP 1 Score: 284.263 bits (726), Expect = 4.597e-76
Identity = 133/158 (84.18%), Postives = 148/158 (93.67%), Query Frame = 2 
Query:   14 YIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF 487
            Y+ALD+EQE+ TA +SS++EKSYELPDGQVITIG ERFRCPE LFQPS +GMES G+HETTYNSIMKCD+DIRKDLY N VLSGG+TMFPGIADRM KEI+ALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  218 YVALDFEQEMSTAASSSSLEKSYELPDGQVITIGNERFRCPESLFQPSFLGMESTGVHETTYNSIMKCDIDIRKDLYANTVLSGGTTMFPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
[Close]
BLAST of EY702434 vs. ExPASy Swiss-Prot
Match: ACTB_XENTR (Actin, cytoplasmic 1 OS=Xenopus tropicalis GN=actb PE=2 SV=1)

HSP 1 Score: 284.263 bits (726), Expect = 4.597e-76
Identity = 134/158 (84.81%), Postives = 148/158 (93.67%), Query Frame = 2 
Query:   14 YIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF 487
            Y+ALD+EQE+ TA +SS++EKSYELPDGQVITIG ERFRCPE LFQPS +GMES GIHETTYNSIMKCDVDIRKDLY N VLSGG+TM+PGIADRM KEI+ALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  218 YVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
[Close]
BLAST of EY702434 vs. ExPASy Swiss-Prot
Match: ACTB_XENLA (Actin, cytoplasmic 1 OS=Xenopus laevis GN=actb PE=2 SV=1)

HSP 1 Score: 284.263 bits (726), Expect = 4.597e-76
Identity = 134/158 (84.81%), Postives = 148/158 (93.67%), Query Frame = 2 
Query:   14 YIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF 487
            Y+ALD+EQE+ TA +SS++EKSYELPDGQVITIG ERFRCPE LFQPS +GMES GIHETTYNSIMKCDVDIRKDLY N VLSGG+TM+PGIADRM KEI+ALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  218 YVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
[Close]
BLAST of EY702434 vs. ExPASy Swiss-Prot
Match: ACTC_BRABE (Actin, cytoplasmic OS=Branchiostoma belcheri PE=2 SV=1)

HSP 1 Score: 283.878 bits (725), Expect = 6.004e-76
Identity = 133/158 (84.18%), Postives = 148/158 (93.67%), Query Frame = 2 
Query:   14 YIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF 487
            Y+ALD+EQE+ TA +SS++EKSYELPDGQVITIG ERFRCPE LFQPS +GMES G+HETTYNSIMKCD+DIRKDLY N VLSGG+TMFPGIADRM KEI+ALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  218 YVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPESLFQPSFLGMESTGVHETTYNSIMKCDIDIRKDLYANTVLSGGTTMFPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
[Close]
BLAST of EY702434 vs. ExPASy Swiss-Prot
Match: ACTB_ORYLA (Actin, cytoplasmic 1 OS=Oryzias latipes GN=actb PE=2 SV=2)

HSP 1 Score: 283.878 bits (725), Expect = 6.004e-76
Identity = 134/158 (84.81%), Postives = 148/158 (93.67%), Query Frame = 2 
Query:   14 YIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF 487
            Y+ALD+EQE+ TA +SS++EKSYELPDGQVITIG ERFRCPE LFQPS +GMES GIHETTYNSIMKCDVDIRKDLY N VLSGG+TM+PGIADRM KEI+ALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  218 YVALDFEQEMGTAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
[Close]
BLAST of EY702434 vs. ExPASy Swiss-Prot
Match: ACTB_OREMO (Actin, cytoplasmic 1 OS=Oreochromis mossambicus GN=actb PE=2 SV=1)

HSP 1 Score: 283.878 bits (725), Expect = 6.004e-76
Identity = 134/158 (84.81%), Postives = 148/158 (93.67%), Query Frame = 2 
Query:   14 YIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF 487
            Y+ALD+EQE+ TA +SS++EKSYELPDGQVITIG ERFRCPE LFQPS +GMES GIHETTYNSIMKCDVDIRKDLY N VLSGG+TM+PGIADRM KEI+ALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  218 YVALDFEQEMGTAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
[Close]
BLAST of EY702434 vs. ExPASy Swiss-Prot
Match: ACTB1_TAKRU (Actin, cytoplasmic 1 OS=Takifugu rubripes GN=actba PE=2 SV=1)

HSP 1 Score: 283.878 bits (725), Expect = 6.004e-76
Identity = 134/158 (84.81%), Postives = 148/158 (93.67%), Query Frame = 2 
Query:   14 YIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF 487
            Y+ALD+EQE+ TA +SS++EKSYELPDGQVITIG ERFRCPE LFQPS +GMES GIHETTYNSIMKCDVDIRKDLY N VLSGG+TM+PGIADRM KEI+ALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  218 YVALDFEQEMGTAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
[Close]
BLAST of EY702434 vs. ExPASy Swiss-Prot
Match: ACTA_STRPU (Actin, cytoskeletal 1A OS=Strongylocentrotus purpuratus GN=CYIA PE=3 SV=1)

HSP 1 Score: 283.878 bits (725), Expect = 6.004e-76
Identity = 134/158 (84.81%), Postives = 148/158 (93.67%), Query Frame = 2 
Query:   14 YIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF 487
            Y+ALD+EQE++TA +SS++EKSYELPDGQVITIG ERFRCPE LFQP+ +GMESAGIHET YNSIMKCDVDIRKDLY N VLSGGSTMFPGIADRM KEI+ALAP +MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  219 YVALDFEQEMQTAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPAFLGMESAGIHETCYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
[Close]
BLAST of EY702434 vs. ExPASy Swiss-Prot
Match: ACT2_SCHMA (Actin-2 OS=Schistosoma mansoni PE=2 SV=1)

HSP 1 Score: 283.878 bits (725), Expect = 6.004e-76
Identity = 134/158 (84.81%), Postives = 148/158 (93.67%), Query Frame = 2 
Query:   14 YIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF 487
            Y+ALD+EQE+ TA +SS++EKSYELPDGQVITIG ERFRCPE LFQPS +GMESAG+HETT+NSIMKCDVDIRKDLY N VLSGG+TMFPGIADRM KEI+ALAPS+MKIK+VAPPERKYSVWIGGSILASLSTFQQMWI+K EYDESGP IVHRKCF
Sbjct:  219 YVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESAGVHETTFNSIMKCDVDIRKDLYANTVLSGGTTMFPGIADRMQKEITALAPSTMKIKIVAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKCF 376
[Close]
BLAST of EY702434 vs. ExPASy Swiss-Prot
Match: ACT1_HALRO (Actin, muscle 1A OS=Halocynthia roretzi GN=MA1A PE=3 SV=1)

HSP 1 Score: 283.878 bits (725), Expect = 6.004e-76
Identity = 134/158 (84.81%), Postives = 148/158 (93.67%), Query Frame = 2 
Query:   14 YIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF 487
            Y+ALD+EQE+ TA +S+++EKSYELPDGQVITIG ERFRCPE LFQPS IGMESAGIHETTYNSIMKCD+DIRKDLY N VLSGGSTM+PGIADRM KEI+ALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI K EYDE+GPSIVHRKCF
Sbjct:  221 YVALDFEQEMATAASSTSLEKSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGSTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVHRKCF 378
The following BLAST results are available for this feature:
BLAST of EY702434 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 479
Match NameE-valueIdentityDescription
ACTC_BRAFL4.597e-7684.18Actin, cytoplasmic OS=Branchiostoma floridae PE=2 ... [more]
ACTB_XENTR4.597e-7684.81Actin, cytoplasmic 1 OS=Xenopus tropicalis GN=actb... [more]
ACTB_XENLA4.597e-7684.81Actin, cytoplasmic 1 OS=Xenopus laevis GN=actb PE=... [more]
ACTC_BRABE6.004e-7684.18Actin, cytoplasmic OS=Branchiostoma belcheri PE=2 ... [more]
ACTB_ORYLA6.004e-7684.81Actin, cytoplasmic 1 OS=Oryzias latipes GN=actb PE... [more]
ACTB_OREMO6.004e-7684.81Actin, cytoplasmic 1 OS=Oreochromis mossambicus GN... [more]
ACTB1_TAKRU6.004e-7684.81Actin, cytoplasmic 1 OS=Takifugu rubripes GN=actba... [more]
ACTA_STRPU6.004e-7684.81Actin, cytoskeletal 1A OS=Strongylocentrotus purpu... [more]
ACT2_SCHMA6.004e-7684.81Actin-2 OS=Schistosoma mansoni PE=2 SV=1[more]
ACT1_HALRO6.004e-7684.81Actin, muscle 1A OS=Halocynthia roretzi GN=MA1A PE... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-006-H08-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702434 ID=EY702434; Name=EY702434; organism=Citrus sinensis; type=EST; length=721bp
CCACGCGTCCGCATACATTGCCCTTGATTATGAACAAGAATTAGAAACCG
CCAAGACCAGCTCTGCTGTTGAAAAGAGCTATGAGTTACCAGATGGTCAG
GTGATCACCATTGGTGCTGAGCGTTTTAGATGCCCAGAAGTCCTTTTCCA
ACCATCAATGATCGGTATGGAGTCTGCTGGTATTCATGAAACAACTTACA
ACTCCATAATGAAATGTGATGTTGATATTAGGAAGGATCTGTATGGGAAC
ATTGTACTTAGTGGCGGTTCCACCATGTTCCCTGGTATTGCTGATAGAAT
GAGCAAAGAAATCAGTGCATTAGCACCAAGCAGCATGAAGATTAAGGTGG
TTGCTCCTCCCGAGAGGAAATATAGTGTCTGGATAGGAGGATCCATTTTG
GCATCCCTCAGCACTTTCCAGCAAATGTGGATTGCCAAATCTGAGTATGA
TGAGTCTGGCCCTTCAATAGTGCACAGGAAATGCTTCTGATCAGGAGCAA
ATATGGACTGGAGCATGGTGCTATTTTAAAACCAAAATGCTGCTTGCATT
TTCTATTTTAAAACCAAAATGCTGCTTGCATTTTCATTCATTTTATTGCC
TTTCTTGGCATTCTTCATTTCAACGTGTGGACAACAACCTGGAAAGAACA
TAATCGTTGCTGTACTATTTCCAAATTTTTATCCCTTTTTCTCAGTAGTG
ATAAATTGTTACCCCCTCAAT
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