EY702433

Overview
NameEY702433
Unique NameEY702433
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length888
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY702433_ssr105 microsatellite EY702433_ssr105:105..119. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig9982 contig Csv1_Contig9982:1..890. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY702433 vs. ExPASy Swiss-Prot
Match: C93A3_SOYBN (Cytochrome P450 93A3 OS=Glycine max GN=CYP93A3 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.266e-19
Identity = 59/199 (29.65%), Postives = 93/199 (46.73%), Query Frame = 2
Query:  167 LGELPHQSLWKLSKKYGPVMHLKLGRIPYVVVSSAETAREVLKVHDLECCGK-ARLTGVGKLSYNYLDVAFAPYGDHWRQMRKLCVMELFSHKRVQSFQFIREEEVXXXXXXXXXXXXXXXPVDLSQKIFALSGSILFRVAFGKRFQGSHFDN-HKFHELLAAAMAVGGSFTSEEMFPYXGWIIDRF--SGYQAKIESV 751
            L   PHQ   KLS +YGP++HL LG +P VV S+AE A+E LK H+     + A    V  L+Y + D  FAPYG +W+ M+KLC+ EL     +  F  +R+ E                 VD   +   LS +I+ R+   +       +   +  +L+  A  + G F   +   +    + RF   G+  ++E +
Sbjct:   47 LSPTPHQDFHKLSLRYGPIIHLFLGSVPCVVASTAEAAKEFLKTHEPAFSNRPANTVAVETLTYGFQDFLFAPYGPYWKFMKKLCMSELLGGHMLDQFLPVRQXETKKFIKRVLQKGISGEAVDFGGEFITLSNNIVSRMIVSQTSTTEDENEVEEMRKLVKDAAELSGKFNISDFVSF----LKRFDLQGFNKRLEKI 241          
BLAST of EY702433 vs. ExPASy Swiss-Prot
Match: C99A3_ORYSJ (Cytochrome P450 99A3 OS=Oryza sativa subsp. japonica GN=CYP99A3 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.277e-19
Identity = 59/189 (31.22%), Postives = 92/189 (48.68%), Query Frame = 2
Query:  179 PHQSLWKLSKKYGPVMHLKLGRIPYVVVSSAETAREVLKVHDLECCGKARLTGVGKLSYNYLDVAFAPYGDHWRQMRKLCVMELFSHKRVQSFQFIREEEVXXXXXXXXXXXXXXXPVDLSQKIFALSGSILFRVAFGKRFQGSHFDNHKFHELLAAAMAVGGSFTSEEMFPYXGWIIDRFSGYQAKIE 745
            P  +L  L+ KYGPVM L+ G++  VV+SS   A+EVL+  D+    +  L       Y  LD+ FAPYG +WR +RKLC +EL S K V+    IR+ E                P  L+  + + + +   + AFG+   G      +F   L  A+     F   ++FP   + ID  +G ++++E
Sbjct:   56 PQVALRDLAGKYGPVMFLRTGQVDTVVISSPAAAQEVLRDKDVTFASRPSLLVSEIFCYGNLDIGFAPYGAYWRMLRKLCTVELLSTKMVRQLAPIRDGETLALVRNIEAAAGGKKPFTLATLLISCTNTFTAKAAFGQACGGEL--QEQFLTALDEALKFSNGFCFGDLFPSLRF-IDAMTGLRSRLE 241          
BLAST of EY702433 vs. ExPASy Swiss-Prot
Match: C99A2_ORYSJ (Cytochrome P450 99A2 OS=Oryza sativa subsp. japonica GN=CYP99A2 PE=2 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 2.117e-18
Identity = 72/240 (30.00%), Postives = 113/240 (47.08%), Query Frame = 2
Query:  179 PHQSLWKLSKKYGPVMHLKLGRIPYVVVSSAETAREVLKVHDLECCGKARLTGVGKLSYNYLDVAFAPYGDHWRQMRKLCVMELFSHKRVQSFQFIREEEV------XXXXXXXXXXXXXXXPVDLSQKIFALSGSILFRVAFGKRFQGSHFDNHKFHELLAAAMAVGGSFTSEEMFPYXGWIIDRFSGYQAK-------IESVFXESGXXXXXXXXXXXXXXXXKQQHEDIVDVMLRIR 859
            P  +L +L+ KYGPVM L++G+I  VVVSS   A+EVL+  D+    +  L       Y+ LDV FAPYG +WR +RKLC +EL S K V+    +R +E                      PV L++ +   + +I  + AFG+   G      +F   L   +   G F   ++FP   + ID  +G +++       ++SVF +                  + Q + +V+V+LRIR
Sbjct:   80 PQVALRELASKYGPVMFLRMGQIDTVVVSSPAAAQEVLRDKDVMFASRPSLLVSEIFCYDNLDVGFAPYGAYWRMLRKLCTVELLSTKVVRQLAPVRNDETLTLVRNIKAASSGHGGGGGKKPVTLARLLTTCTNTITAKAAFGQAC-GVEL-QEQFLTALDVGLKFSGGFCFGDLFPSLRF-IDAMTGLRSRLWRARGQLDSVFDK------------IIAQCEEHQGDSLVNVLLRIR 304          
BLAST of EY702433 vs. ExPASy Swiss-Prot
Match: C71A8_MENPI (Cytochrome P450 71A8 OS=Mentha piperita GN=CYP71A8 PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.717e-18
Identity = 62/236 (26.27%), Postives = 112/236 (47.46%), Query Frame = 2
Query:  164 QLGELPHQSLWKLSKKYGPVMHLKLGRIPYVVVSSAETAREVLKVHDLECCGKARLTGVGKLSYNYLDVAFAPYGDHWRQMRKLCVMELFSHKRVQSFQFIREEEVXXXXXXXXXXXXXXXPVDLSQKIFALSGSILFRVAFGKRFQGSHFDNHKFHELLAAAMAVGGSFTSEEMFPYXGWIIDRFSGYQAKIESVFXESGXXXXXXXXXXXXXXXXKQQHEDIVDVMLRIRREQA 871
            QLG LPH +L  +++K+GP+M L LG +  V      ++R   + +      + R     + +   L      YG++WRQ++ +CV++L S+KRVQSF+ +REEE                 V+LS     L+  ++ R A G+++     +  KF E+L   + + G+ +  +  P   W I+R +G+  +++ +  E                  K + E+ VD++L I R  +
Sbjct:   64 QLGSLPHHNLRSMARKHGPIMLLHLGSVRPV------SSRRRPRGNHENSRSRLRRPRGSRSAALQLQGRVGGYGEYWRQLKTICVVQLLSNKRVQSFRSVREEETELLMKKIGDSSGN---VNLSHMFTQLTNDVVCRSAIGRKYGAGDENGEKFLEILREFLELLGAISIGDFVPSLWW-INRINGFDRRVDRIAKEMDEFLEKVIHERLENPAAKAE-ENFVDILLEIYRNNS 288          
BLAST of EY702433 vs. ExPASy Swiss-Prot
Match: C82A3_SOYBN (Cytochrome P450 82A3 OS=Glycine max GN=CYP82A3 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.160e-18
Identity = 56/191 (29.32%), Postives = 95/191 (49.74%), Query Frame = 2
Query:  173 ELPHQSLWKLSKKYGPVMHLKLGRIPYVVVSSAETAREVLKVHDLECCGKARLTGVGKLSYNYLDVAFAPYGDHWRQMRKLCVMELFSHKRVQSFQFIREEEVXXXXXXXXXXXXXXXP-------VDLSQKIFALSGSILFRVAFGKRFQG-SHFDN----HKFHELLAAAMAVGGSFTSEEMFPYXGWI 709
            + PH+ L  L+ KYGP+  +KLG  P +V+S+ E ++E+   +DL    + +L  V  +SYN   V  APYG +WR++RK+   E  S++R++    IR  EV                       VD+ Q +  L+ +++ R+  GKR+ G  H +      +F + +   M + G+FT  +  P   W+
Sbjct:   58 QTPHKVLGALADKYGPLFTIKLGMKPALVLSNWEMSKELFTTNDLAVSSRPKLVAVEVMSYNQAFVGLAPYGPYWRELRKIVTFEFLSNRRIEQRNHIRVSEVRTSIKELFDIWSNGNKNESRYTLVDIKQWLAYLTFNMVVRMVVGKRYFGVMHVEGKDKAQRFMKNIREFMNLMGTFTVADGVPCLRWL 248          
BLAST of EY702433 vs. ExPASy Swiss-Prot
Match: C98A3_ARATH (Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CYP98A3 PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.045e-18
Identity = 56/180 (31.11%), Postives = 97/180 (53.89%), Query Frame = 2
Query:  194 WKLSKKYGPVMHLKLGRIPYVVVSSAETAREVLKVHDLECCGKARLTGVGKLSYNYLDVAFAPYGDHWRQMRKLCVMELFSHKRVQSFQFIREEE----VXXXXXXXXXXXXXXXPVDLSQKIFALSGSILFRVAFGKRFQGSH----FDNHKFHELLAAAMAVGGSFTSEEMFPYXGWI 709
            ++ ++ YGP++ + +G I  VVVSSAE A+EVLK HD +   + R       S N  D+ +A YG H+ ++RK+C +ELF+ KR++S + IRE+E    V                + L + + A++ + + R+AFGKRF  +         +F  +++  + +G S +  E  P+  W+
Sbjct:   52 YEWAQSYGPIISVWIGSILNVVVSSAELAKEVLKEHDQKLADRHRNRSTEAFSRNGQDLIWADYGPHYVKVRKVCTLELFTPKRLESLRPIREDEVTAMVESVFRDCNLPENRAKGLQLRKYLGAVAFNNITRLAFGKRFMNAEGVVDEQGLEFKAIVSNGLKLGASLSIAEHIPWLRWM 231          
BLAST of EY702433 vs. ExPASy Swiss-Prot
Match: C82A4_SOYBN (Cytochrome P450 82A4 OS=Glycine max GN=CYP82A4 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.792e-17
Identity = 59/203 (29.06%), Postives = 95/203 (46.80%), Query Frame = 2
Query:  179 PHQSLWKLSKKYGPVMHLKLGRIPYVVVSSAETAREVLKVHDLECCGKARLTGVGKLSYNYLDVAFAPYGDHWRQMRKLCVMELFSHKRVQSFQFIREEEV------XXXXXXXXXXXXXXXPVDLSQKIFALSGSILFRVAFGKRFQGSHFDNHKFHELLAAA---MAVGGSFTSEEMFPYXGWIIDRFSGYQAKIESVFXE 760
            PH++L  L++K+GP+  +KLG    +VVS  E ARE    +D+    + +L     + YN   +  APYG +WR++RK+ V E+ S  RV+  Q +R  EV                      V+L Q       +++ R+  GKRF  +   + K  + + A    M + G FT  +  PY  W+   F GY+  ++    E
Sbjct:   62 PHKALGALAEKHGPLFTIKLGAKKALVVSDWEMARECFTTNDVAVSARPKLLVAELMCYNNAMLLVAPYGPYWRELRKIIVTEILSSSRVEQLQDVRVSEVQNSIVELYDVWRSQKNESDYASVELKQWFAQPIFNMVLRMVVGKRFLSATATDEKAEKCVKAVDEFMRLAGVFTVGDAIPYLRWL--DFGGYEKAMKETAKE 262          
BLAST of EY702433 vs. ExPASy Swiss-Prot
Match: C75A2_SOLME (Flavonoid 3',5'-hydroxylase OS=Solanum melongena GN=CYP75A2 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.792e-17
Identity = 49/182 (26.92%), Postives = 88/182 (48.35%), Query Frame = 2
Query:  167 LGELPHQSLWKLSKKYGPVMHLKLGRIPYVVVSSAETAREVLKVHDLECCGKARLTGVGKLSYNYLDVAFAPYGDHWRQMRKLCVMELFSHKRVQSFQFIREEEVXXXXXXXXXXXXXXXPVDLSQKIFALSGSILFRVAFGKR-FQGSHFDNHKFHELLAAAMAVGGSFTSEEMFPYXGWI 709
            LG +PH +L K++KKYGP+M+LK+G    VV S+   A+  LK  D+    +    G   ++YN  D+ FAPYG  W+ +RKL  + +   K ++++  +R  E+                + ++  +     +++ +V   KR F     + ++F  ++   M V G F   +  P   W+
Sbjct:   52 LGGMPHVALAKMAKKYGPIMYLKVGTCGMVVASTPNAAKAFLKTLDINFSNRPPNAGATHMAYNAQDMVFAPYGPRWKLLRKLSNLHMLGGKALENWANVRANELGHMLKSMFDASHVGERIVVADMLTFAMANMIGQVMLSKRVFVEKGKEVNEFKNMVVELMTVAGYFNIGDFIPQIAWM 233          
BLAST of EY702433 vs. ExPASy Swiss-Prot
Match: C76C2_ARATH (Cytochrome P450 76C2 OS=Arabidopsis thaliana GN=CYP76C2 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.993e-17
Identity = 53/185 (28.65%), Postives = 93/185 (50.27%), Query Frame = 2
Query:  167 LGELPHQSLWKLSKKYGPVMHLKLGRIPYVVVSSAETAREVLKVHDLECCGKARLTGVGKLSYNYLDVAF-APYGDHWRQMRKLCVMELFSHKRVQSFQFIREEEVXXXXXXXXXXXXXXXPVDLSQKIFALSGSILFRVAFGKRFQGSHFDNHK---FHELLAAAMAVGGSFTSEEMFPYXGWI 709
            +G  PH S   LSK YGP+M LK G +  VVV+S E AREVL+ +D     +     +  ++++ + V +  P    WR +RKL   +LFS +R+++ + +RE +V                VD+S+  F  + +I+  + F       ++D++K   F + +   M   G+  +   FP+ G++
Sbjct:   54 VGRNPHHSFADLSKTYGPIMSLKFGSLNTVVVTSPEAAREVLRTYDQILSSRTPTNSIRSINHDKVSVVWLPPSSSRWRLLRKLSATQLFSPQRIEATKTLRENKVKELVSFMSESSEREEAVDISRATFITALNIISNILFSVDL--GNYDSNKSGVFQDTVIGVMEAVGNPDAANFFPFLGFL 236          
BLAST of EY702433 vs. ExPASy Swiss-Prot
Match: C75A4_GENTR (Flavonoid 3',5'-hydroxylase OS=Gentiana triflora GN=CYP75A4 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.993e-17
Identity = 49/182 (26.92%), Postives = 88/182 (48.35%), Query Frame = 2
Query:  167 LGELPHQSLWKLSKKYGPVMHLKLGRIPYVVVSSAETAREVLKVHDLECCGKARLTGVGKLSYNYLDVAFAPYGDHWRQMRKLCVMELFSHKRVQSFQFIREEEVXXXXXXXXXXXXXXXPVDLSQKIFALSGSILFRVAFGKR-FQGSHFDNHKFHELLAAAMAVGGSFTSEEMFPYXGWI 709
            LG +PH +   ++KKYG VM+LK+G     + S+ + A+  LK  DL    +    G   L+YN  D+ FA YG  W+ +RKL  + +   K ++++  +R+ E+               PV +S+ +     ++L +V   +R F      +++F +++   M   G F   +  P  GW+
Sbjct:   57 LGNMPHVTFANMAKKYGSVMYLKVGSHGLAIASTPDAAKAFLKTLDLNFSNRPPNAGATHLAYNAQDMVFAHYGPKWKLLRKLSNLHMLGGKALENWADVRKTELGYMLKAMFESSQNNEPVMISEMLTYAMANMLSQVILSRRVFNKKGAKSNEFKDMVVELMTSAGYFNIGDFIPSIGWM 238          
The following BLAST results are available for this feature:
BLAST of EY702433 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 123
Match NameE-valueIdentityDescription
C93A3_SOYBN3.266e-1929.65Cytochrome P450 93A3 OS=Glycine max GN=CYP93A3 PE=... [more]
C99A3_ORYSJ7.277e-1931.22Cytochrome P450 99A3 OS=Oryza sativa subsp. japoni... [more]
C99A2_ORYSJ2.117e-1830.00Cytochrome P450 99A2 OS=Oryza sativa subsp. japoni... [more]
C71A8_MENPI4.717e-1826.27Cytochrome P450 71A8 OS=Mentha piperita GN=CYP71A8... [more]
C82A3_SOYBN6.160e-1829.32Cytochrome P450 82A3 OS=Glycine max GN=CYP82A3 PE=... [more]
C98A3_ARATH8.045e-1831.11Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CY... [more]
C82A4_SOYBN1.792e-1729.06Cytochrome P450 82A4 OS=Glycine max GN=CYP82A4 PE=... [more]
C75A2_SOLME1.792e-1726.92Flavonoid 3',5'-hydroxylase OS=Solanum melongena G... [more]
C76C2_ARATH3.993e-1728.65Cytochrome P450 76C2 OS=Arabidopsis thaliana GN=CY... [more]
C75A4_GENTR3.993e-1726.92Flavonoid 3',5'-hydroxylase OS=Gentiana triflora G... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-701-006-H07-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702433 ID=EY702433; Name=EY702433; organism=Citrus sinensis; type=EST; length=888bp
CCACGCGTCCGGCACAATAACCATGACCATGATCACGTGGCTCCCTCTTC
TCCTGATTCCTCTACTACTTATCCTCAAAAACATGAAGAAAAGCCAAAAG
CAGAAGCAGCAGCAGCAGCTTCCACCGGGGCCTCCTATGCTCCCAATACT
TGGCAATTTACTCCAACTTGGAGAACTGCCTCACCAATCTTTATGGAAAC
TGTCCAAAAAGTACGGCCCAGTTATGCACCTCAAACTTGGTCGTATACCC
TATGTTGTAGTCTCCTCTGCAGAGACAGCAAGAGAGGTCTTGAAAGTTCA
TGATCTTGAGTGCTGCGGCAAAGCGCGATTAACCGGCGTCGGGAAGCTTT
CGTATAACTATTTGGATGTTGCGTTTGCCCCATATGGTGATCACTGGAGA
CAGATGCGCAAGTTATGTGTTATGGAGCTTTTCAGCCACAAGAGGGTGCA
GTCATTTCAGTTCATCAGGGAAGAAGAAGTTGCCTCACTTGTGAATTCCA
TCTCTCGAGCATCATCTTCTGCTAGTCCTGTTGATCTTTCTCAGAAGATA
TTTGCTCTGTCTGGGAGCATACTATTTAGAGTGGCTTTCGGAAAGAGATT
TCAAGGGAGTCATTTTGATAACCATAAATTTCATGAATTGCTCGCGGCTG
CTATGGCTGTGGGAGGGAGCTTCACATCAGAGGAAATGTTTCCGTATGNT
GGTTGGATCATTGACAGGTTCTCTGGTTATCAAGCGAAGATCGAGAGCGT
TTTCCANGAAAGTGGGGATCTTCTTTTGGACAGTAATCGAAGATCATCTT
TAAGCTGNAGGGACAAACAACAGCATGAAGACATCGTCGATGTCATGCTG
CGAATTAGAAGGGAACAAGCTCATCTGCCCACGNAGAA
back to top