EY702419

Overview
NameEY702419
Unique NameEY702419
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length889
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702419 vs. ExPASy Swiss-Prot
Match: IF6_PYRFU (Translation initiation factor 6 OS=Pyrococcus furiosus GN=eif6 PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 4.006e-25
Identity = 74/207 (35.75%), Postives = 108/207 (52.17%), Query Frame = 2
Query:  194 RLMFENSCEVGVFSKLTNAYCLVAIGGSESFYSTFEAELADVIPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVV---VQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVGSYCSFXNRGCLVHPHTSIEDLDELXTLLQVPLVAGTVNRGKRVIAAGLTVNDWTAFCG 805
            +L FENS  +GVF   T+   L+  G  E         L   +PVV+ S+  +RIIG L AGN N +++P    D EL+ ++N+  +  +   V   + + +ALGN I  ND  AL  +   RE  + I D+LGVEV R  IAG + VGS     N+G LVHP  + E+L+ L  L +V +  GT N G   + + +  N +    G
Sbjct:    5 KLDFENSPYLGVFGIATDKVVLIREGLQEKKLEVIREVLK--VPVVEASLMKSRIIGVLGAGNSNAIIVPWYVWDSELEKIKNAFREYGIDTEVVPFQTKYTALGNLILTNDKGALVSSKFSREEAKKIGDILGVEVERGVIAGIVAVGSAGVVTNKGGLVHPEATDEELEWLSDLFKVDVYVGTANMGVPYVGSCMLANSYGVVVG 209          
BLAST of EY702419 vs. ExPASy Swiss-Prot
Match: IF6_METST (Translation initiation factor 6 OS=Methanosphaera stadtmanae (strain DSM 3091) GN=eif6 PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 4.006e-25
Identity = 72/210 (34.29%), Postives = 112/210 (53.33%), Query Frame = 2
Query:  185 MATRLMFENSCEVGVFSKLTNAYCLVAIGGSESFYSTFEAELADVIPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVGSYCSFXNRGCLVHPHTSIEDLDELXTLLQVPLVAGTVNRGKRVIAAGLTVNDWTAFCGSDT 814
            M  +   + +  +GV     +   +V+ G  +S+  + +  L   +P++KT I G+ + G L AGN NGLL+       EL  LR      + V+ + ++L+A+GN I  ND+ AL +  L  E + +I + L VEV   +IAG  +VGS  +  NRG LVHP  S E+LD +  +L VP   GTVNRG +++ A +  N      G+ T
Sbjct:    1 MIQKFDIDGNPNLGVSILAKDNVAIVSPGLQDSYLKSIKETLN--VPIIKTPICGSNLAGALMAGNSNGLLISPYVFSHELDVLREH---DINVEIMPDKLTAIGNIIVANDNGALVNPSLSDEAKRIIKNTLEVEVVETSIAGLDIVGSLVAATNRGALVHPDASEEELDLVEDVLGVPAEIGTVNRGVKLVGACIIANSNGVIVGNKT 205          
BLAST of EY702419 vs. ExPASy Swiss-Prot
Match: IF6_AERPE (Translation initiation factor 6 OS=Aeropyrum pernix GN=eif6 PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 5.232e-25
Identity = 72/208 (34.62%), Postives = 109/208 (52.40%), Query Frame = 2
Query:  194 RLMFENSCEVGVFSKLTNAYCLVAIG-GSESFYSTFEAELADVIPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVGSYCSFXNRGCLVHPHTSIEDLDELXTLLQVPLVAGTVNRGKRVIAAGLTVNDWTAFCGSDT 814
            +L    +  +GV+   +++Y L     G++   +  E     +  VV+  + G R++G L  GN  G+LLP    D+E++ +R +L + V V  +  R +ALGN I CND   L    L++E  + ++D LGVEV   ++AG   VGS     NRG L HP  S E+L  L  + +VP  AGT+N G   +  GL  N + A  G DT
Sbjct:   11 KLSLYGNPNIGVYLTASDSYVLAPDDIGADDVRTISEVLGVAMERVVRLRVLGMRLVGVLTTGNSRGILLPEGV-DREVELVRKAL-EGVEVGIVPTRSNALGNVIVCNDRACLASPGLEKEALKTVSDTLGVEVVEGSVAGVYTVGSAIVVTNRGGLAHPDASEEELKFLSDVFKVPFEAGTINFGVEFVRTGLVANSYGALVGEDT 216          
BLAST of EY702419 vs. ExPASy Swiss-Prot
Match: IF6_THEON (Translation initiation factor 6 OS=Thermococcus onnurineus (strain NA1) GN=eif6 PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 6.833e-25
Identity = 72/200 (36.00%), Postives = 103/200 (51.50%), Query Frame = 2
Query:  194 RLMFENSCEVGVFSKLTNAYCLVAIGGSESFYSTFEAELADVIPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIE---ERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVGSYCSFXNRGCLVHPHTSIEDLDELXTLLQVPLVAGTVNRGKRVIAAGLTVN 784
            +L FENS  +GV+   T+   L+  G  E         L   +P+++TSI  +RI+G   AGN N +++P    D EL+H++N L +  +  RIE     L+A GN I  ND  AL      RE  + + D+LGVEV R  I     VGS     NRG LVHP  + E+L+ L  L +V +  GT N G   + + +  N
Sbjct:    5 KLDFENSPYLGVYGTATDRVALIREGLGEKKLEVLREVLK--VPLIETSIMKSRIVGVFAAGNSNAIVVPWYIWDAELEHIQNELNELDIDMRIEPFQSTLTAFGNLILANDKAALISVKFTREEAKKLEDILGVEVERGMIGDYHAVGSVGVVTNRGGLVHPEATDEELEWLRDLFKVDIYVGTANMGVPFVGSCMLAN 202          
BLAST of EY702419 vs. ExPASy Swiss-Prot
Match: IF6_PYRHO (Translation initiation factor 6 OS=Pyrococcus horikoshii GN=eif6 PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.166e-24
Identity = 71/200 (35.50%), Postives = 102/200 (51.00%), Query Frame = 2
Query:  194 RLMFENSCEVGVFSKLTNAYCLVAIGGSESFYSTFEAELADVIPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRI---EERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVGSYCSFXNRGCLVHPHTSIEDLDELXTLLQVPLVAGTVNRGKRVIAAGLTVN 784
            RL FENS  +GVF   T+   L+  G  E         L   +PV++ S+  +RIIG L  GN N ++LP    D E++ ++ +L +  +   +     + +ALGN I  ND  AL      R+  + I ++LGVEV R  IAG   VGS     N+G LVHP TS E+L+ L  L +V +  GT N G   +   +  N
Sbjct:    5 RLDFENSPYLGVFGVATDRVVLIREGLQEKKLEVIRETLK--VPVIEVSVMKSRIIGTLATGNSNAIILPWYVWDAEIERIKKALSEYGIDMEVVPFRSKYTALGNLILTNDKAALVSAKFSRKEAQEIGEILGVEVERGVIAGLHAVGSAGVVTNKGGLVHPETSDEELEWLSDLFKVDVYVGTANMGVPYVGTCMLAN 202          
BLAST of EY702419 vs. ExPASy Swiss-Prot
Match: IF6_PYRAB (Translation initiation factor 6 OS=Pyrococcus abyssi GN=eif6 PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 4.429e-24
Identity = 73/200 (36.50%), Postives = 101/200 (50.50%), Query Frame = 2
Query:  194 RLMFENSCEVGVFSKLTNAYCLVAIGGSESFYSTFEAELADVIPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRI---EERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVGSYCSFXNRGCLVHPHTSIEDLDELXTLLQVPLVAGTVNRGKRVIAAGLTVN 784
            RL FENS  +GVF   T+   LV  G  E         L   +PV++ SI  +RIIG L  GN N +L+P    D E++ ++++  +  +   I     + +ALGN I  ND  AL      R+  + I D+LGVEV R  IAG   VGS     N+G LVHP  S E+L+ L  L +V +  GT N G   +   +  N
Sbjct:    5 RLDFENSPYLGVFGVATDRVVLVREGLQEKKLEVIREVLK--VPVIEASIMKSRIIGTLATGNSNAILVPWYVWDTEIERIKSAFKEYGIETEIVPFRTKYTALGNLILTNDKAALVSAKFSRDEAKEIGDILGVEVERGLIAGLHAVGSAGVVTNKGGLVHPEASDEELEWLSELFKVDVYVGTANMGVPYVGTCMLAN 202          
BLAST of EY702419 vs. ExPASy Swiss-Prot
Match: IF6_METMA (Translation initiation factor 6 OS=Methanosarcina mazei GN=eif6 PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 9.867e-24
Identity = 69/198 (34.85%), Postives = 105/198 (53.03%), Query Frame = 2
Query:  221 VGVFSKLTNAYCLVAIGGSESFYSTFEAELADVIPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVGSYCSFXNRGCLVHPHTSIEDLDELXTLLQVPLVAGTVNRGKRVIAAGLTVNDWTAFCGSDT 814
            +GVF+  T    LV         +  E  L   + VV+T I G+ ++G L  GN NG LLP+ ++ +E+Q  R  +P  +    + +RL+A+GN +  ND  AL H +L     E+IA  L VEV+R TIAG   VG      N+G LVHP  ++ + + L  +  +P+  GT N G +++ +GL  N      GS+T
Sbjct:   13 IGVFATCTEDLALVPPLTKPEVCTILEEALD--VRVVETLINGSTVVGALSRGNSNGFLLPYGSSVEEMQK-RTGVPAGI----LPDRLNAVGNIVLANDSAALVHPELSDRALEIIARTLKVEVYRGTIAGIKNVGMAGVVTNKGLLVHPKVTVSEREALEEIFGLPVNIGTTNFGTQMLGSGLLANSKNFVAGSET 203          
BLAST of EY702419 vs. ExPASy Swiss-Prot
Match: IF6_THEGJ (Translation initiation factor 6 OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=eif6 PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.289e-23
Identity = 71/207 (34.30%), Postives = 103/207 (49.76%), Query Frame = 2
Query:  194 RLMFENSCEVGVFSKLTNAYCLVAIGGSESFYSTFEAELADVIPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRI---EERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVGSYCSFXNRGCLVHPHTSIEDLDELXTLLQVPLVAGTVNRGKRVIAAGLTVNDWTAFCG 805
            RL FENS  +GV+   T+   ++  G  E   +T    L   +P+++TS+  +RI+G   AGN N L++P    D EL  +   L +  +   +   + RL+A GN I  ND  AL   D  RE    I D+LGV V R  IA    VGS     N+G LVHP  + E+L+ L  L +V +  GT N G   + + +  N +    G
Sbjct:    5 RLDFENSPYLGVYGFATDRVAVIREGLGEKKLATLREVLK--VPLIETSVMKSRIVGIFVAGNSNALIVPWYIWDAELDFINAQLREYGIDMEVVPFQSRLTAFGNLILANDKGALVSKDFTREEARKIEDILGVPVERGVIADYTAVGSVGVVTNKGGLVHPEATDEELEWLSDLFKVDVYVGTANMGVPFVGSCMIANSYGVVVG 209          
BLAST of EY702419 vs. ExPASy Swiss-Prot
Match: IF6_METBF (Translation initiation factor 6 OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=eif6 PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.871e-23
Identity = 68/198 (34.34%), Postives = 101/198 (51.01%), Query Frame = 2
Query:  221 VGVFSKLTNAYCLVAIGGSESFYSTFEAELADVIPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVGSYCSFXNRGCLVHPHTSIEDLDELXTLLQVPLVAGTVNRGKRVIAAGLTVNDWTAFCGSDT 814
            +GVF+  T    LV  G      +  E  L     +V+T + G+ +IG L  GN NG L  + T   E++ L       V  + +  +L+A+GN +  ND  AL H +L  +  E+IA  L VEV+R TIAG   VG      N+G LVHP  +  +++ L  L ++P+  GT N G +++ +GL  N      GSDT
Sbjct:   13 IGVFATCTEDVVLVPTGTKPETCAILEDSLD--ARIVETLVNGSVVIGALSRGNSNGFLYSYGTDAGEMKELTG-----VEAEILPGKLNAVGNIVLANDSAALVHPELSDKAIEVIASTLKVEVYRGTIAGIKNVGMAGVVTNKGLLVHPKVTASEIETLEKLFELPVNIGTTNFGTQMLGSGLLANSKNYLAGSDT 203          
BLAST of EY702419 vs. ExPASy Swiss-Prot
Match: IF6_PYRKO (Translation initiation factor 6 OS=Pyrococcus kodakaraensis GN=eif6 PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.897e-23
Identity = 72/208 (34.62%), Postives = 106/208 (50.96%), Query Frame = 2
Query:  194 RLMFENSCEVGVFSKLTNAYCLVAIGGSESFYSTFEAELADVIPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPD---QVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGV-EVFRQTIAGNILVGSYCSFXNRGCLVHPHTSIEDLDELXTLLQVPLVAGTVNRGKRVIAAGLTVNDWTAFCG 805
            RL FENS  +GV+ + T+   L+  G  E         L   +P+++TSI  +RI+G   AGN N +++P    D EL+ ++ +L +    + V   + RL+ALGN I  ND  AL   +  RE    I ++LGV EV R  IA    VGS     N+G LVHP  + E+L+ L  L  V +  GT N G   + + +  N +    G
Sbjct:    5 RLDFENSPYLGVYGRATDRVLLLREGLGEKKLEVLREVLK--VPIIETSIMKSRIVGIFAAGNSNAIIVPWYIWDAELERIKTALNEFGIDMDVVPFKSRLTALGNLILTNDKAALVSKEFTREEANAIGEILGVDEVERGMIASYRSVGSVGVVTNKGGLVHPEATDEELEWLSDLFGVDIYVGTANMGVPFVGSCMLANSYGVVVG 210          
The following BLAST results are available for this feature:
BLAST of EY702419 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 63
Match NameE-valueIdentityDescription
IF6_PYRFU4.006e-2535.75Translation initiation factor 6 OS=Pyrococcus furi... [more]
IF6_METST4.006e-2534.29Translation initiation factor 6 OS=Methanosphaera ... [more]
IF6_AERPE5.232e-2534.62Translation initiation factor 6 OS=Aeropyrum perni... [more]
IF6_THEON6.833e-2536.00Translation initiation factor 6 OS=Thermococcus on... [more]
IF6_PYRHO1.166e-2435.50Translation initiation factor 6 OS=Pyrococcus hori... [more]
IF6_PYRAB4.429e-2436.50Translation initiation factor 6 OS=Pyrococcus abys... [more]
IF6_METMA9.867e-2434.85Translation initiation factor 6 OS=Methanosarcina ... [more]
IF6_THEGJ1.289e-2334.30Translation initiation factor 6 OS=Thermococcus ga... [more]
IF6_METBF2.871e-2334.34Translation initiation factor 6 OS=Methanosarcina ... [more]
IF6_PYRKO4.897e-2334.62Translation initiation factor 6 OS=Pyrococcus koda... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-006-G05-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702419 ID=EY702419; Name=EY702419; organism=Citrus sinensis; type=EST; length=889bp
CCACGCGTCCGGCAGAAACCCTCTTCTCATCTCATATTGGGTGGGGTTTG
TTTCCGGCCGAAAGGGTAACAAGTGAAGGGCCGCCTCATCATCATTATCA
TCATCGCTTTGGCATTTCGAGTTTTCGACATCGTTTTCCGTCATTTTGCT
TTTTAATCAATTCAATTTCTGTCAATCTGTAATCATGGCAACCAGGCTTA
TGTTTGAGAATTCATGTGAGGTTGGTGTGTTTTCCAAGCTCACTAATGCT
TATTGCTTGGTTGCAATTGGAGGTTCTGAAAGCTTCTACAGCACATTTGA
GGCTGAGTTAGCAGATGTCATTCCTGTTGTTAAAACATCTATTGGTGGCA
CTAGGATTATCGGCCGGCTTTGTGCTGGAAACAAAAATGGGCTTCTCTTG
CCACACACTACCACAGACCAAGAACTTCAACACTTGAGGAACAGCCTACC
TGATCAAGTTGTCGTTCAGCGTATTGAAGAGAGGCTATCTGCCCTGGGCA
ATTGTATAGCATGCAACGACCATGTTGCTCTTACACACACAGATCTTGAC
AGGGAAACAGAGGAAATGATTGCAGATGTTCTTGGAGTAGAAGTTTTTAG
GCAGACAATTGCTGGTAATATCCTTGTTGGCAGTTACTGTTCCTTCNTCA
ACAGAGGATGCTTGGTCCACCCTCACACATCCATTGAAGACTTGGATGAA
CTTTNCACTCTCTTGCAAGTACCTCTGGTGGCTGGGACTGTGAACCGTGG
AAAGCGAGTCATAGCTGCTGGGTTAACTGTGAATGACTGGACAGCATTCT
GTGGATCAGACACACAGCAACTGAACTCTCTGTTATTGAGAGGGTTTCAG
TTGAGGGAGCTCAACTACTGCCCTTGGGACGAGATGAGA
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