EY702419

Overview
NameEY702419
Unique NameEY702419
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length889
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702419 vs. ExPASy Swiss-Prot
Match: IF6_SULIY (Translation initiation factor 6 OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=eif6 PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.021e-20
Identity = 70/210 (33.33%), Postives = 109/210 (51.90%), Query Frame = 2
Query:  194 RLMFENSCEVGVFSKLTNAYCLVAIGGSESFYSTFEAELADVI--PVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQ-TIAGNILVGSYCSFXNRGCLVHPHTSIEDLDELXTLLQVPLVAGTVNRGKRVIAAGLTVNDWTAFCGSDT 814
            RL    +  +GV+    N Y +V  G      S  +  +  ++   +++  I  + ++G   +GN NG+LLP +T D E + L+ +L D   V+ +  +++ALGN I  N+  AL + + +   E++I + LGVE  R+  IA  I VGS     N+G LVH  TS ++L EL  L  V +  GTVN G   I +GL  ND     G+ T
Sbjct:    5 RLSIFGTDNIGVYIYTNNKYTVVPRG----LDSETKENIVQILGTELIEAEISRSFLLGIFISGNDNGILLPKSTIDDEFRFLKENLRD-CRVEVLNSKVTALGNTILTNNKAALIYPEFNDIEEKIIKETLGVEEIRRGKIAQMITVGSVGVVTNKGGLVHVDTSEKELKELEKLFSVKIDIGTVNFGSVFIRSGLVANDKGTLVGAST 209          
BLAST of EY702419 vs. ExPASy Swiss-Prot
Match: IF6_SULIN (Translation initiation factor 6 OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=eif6 PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.021e-20
Identity = 70/210 (33.33%), Postives = 109/210 (51.90%), Query Frame = 2
Query:  194 RLMFENSCEVGVFSKLTNAYCLVAIGGSESFYSTFEAELADVI--PVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQ-TIAGNILVGSYCSFXNRGCLVHPHTSIEDLDELXTLLQVPLVAGTVNRGKRVIAAGLTVNDWTAFCGSDT 814
            RL    +  +GV+    N Y +V  G      S  +  +  ++   +++  I  + ++G   +GN NG+LLP +T D E + L+ +L D   V+ +  +++ALGN I  N+  AL + + +   E++I + LGVE  R+  IA  I VGS     N+G LVH  TS ++L EL  L  V +  GTVN G   I +GL  ND     G+ T
Sbjct:    5 RLSIFGTDNIGVYIYTNNKYTVVPRG----LDSETKENIVQILGTELIEAEISRSFLLGIFISGNDNGILLPKSTIDDEFRFLKENLRD-CRVEVLNSKVTALGNTILTNNKAALIYPEFNDIEEKIIKETLGVEEIRRGKIAQMITVGSVGVVTNKGGLVHVDTSEKELKELEKLFSVKIDIGTVNFGSVFIRSGLVANDKGTLVGAST 209          
BLAST of EY702419 vs. ExPASy Swiss-Prot
Match: IF6_SULIL (Translation initiation factor 6 OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=eif6 PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.021e-20
Identity = 70/210 (33.33%), Postives = 109/210 (51.90%), Query Frame = 2
Query:  194 RLMFENSCEVGVFSKLTNAYCLVAIGGSESFYSTFEAELADVI--PVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQ-TIAGNILVGSYCSFXNRGCLVHPHTSIEDLDELXTLLQVPLVAGTVNRGKRVIAAGLTVNDWTAFCGSDT 814
            RL    +  +GV+    N Y +V  G      S  +  +  ++   +++  I  + ++G   +GN NG+LLP +T D E + L+ +L D   V+ +  +++ALGN I  N+  AL + + +   E++I + LGVE  R+  IA  I VGS     N+G LVH  TS ++L EL  L  V +  GTVN G   I +GL  ND     G+ T
Sbjct:    5 RLSIFGTDNIGVYIYTNNKYTVVPRG----LDSETKENIVQILGTELIEAEISRSFLLGIFISGNDNGILLPKSTIDDEFRFLKENLRD-CRVEVLNSKVTALGNTILTNNKAALIYPEFNDIEEKIIKETLGVEEIRRGKIAQMITVGSVGVVTNKGGLVHVDTSEKELKELEKLFSVKIDIGTVNFGSVFIRSGLVANDKGTLVGAST 209          
BLAST of EY702419 vs. ExPASy Swiss-Prot
Match: IF6_SULIM (Translation initiation factor 6 OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=eif6 PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.742e-20
Identity = 70/210 (33.33%), Postives = 109/210 (51.90%), Query Frame = 2
Query:  194 RLMFENSCEVGVFSKLTNAYCLVAIGGSESFYSTFEAELADVI--PVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQ-TIAGNILVGSYCSFXNRGCLVHPHTSIEDLDELXTLLQVPLVAGTVNRGKRVIAAGLTVNDWTAFCGSDT 814
            RL    +  +GV+    N Y +V  G      S  +  +  ++   +++  I  + ++G   +GN NG+LLP +T D E + L+ +L D   V+ +  +++ALGN I  N+  AL + + +   E++I + LGVE  R+  IA  I VGS     N+G LVH  TS ++L EL  L  V +  GTVN G   I +GL  ND     G+ T
Sbjct:    5 RLSIFGTDNIGVYIYTNNKYTVVPRG----LDSETKENIVQILGTELIEAEISRSFLLGIFISGNDNGILLPKSTIDDEFRFLKENLRD-CRVEVLNSKVTALGNTILTNNKAALIYPEFNDIEEKIIKETLGVEEIRRGKIAQMITVGSVGVVTNKGGLVHVDTSEKELKELEKLFGVKIDIGTVNFGSVFIRSGLVANDKGTLVGAST 209          
BLAST of EY702419 vs. ExPASy Swiss-Prot
Match: IF6_SULIK (Translation initiation factor 6 OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=eif6 PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.742e-20
Identity = 70/210 (33.33%), Postives = 109/210 (51.90%), Query Frame = 2
Query:  194 RLMFENSCEVGVFSKLTNAYCLVAIGGSESFYSTFEAELADVI--PVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQ-TIAGNILVGSYCSFXNRGCLVHPHTSIEDLDELXTLLQVPLVAGTVNRGKRVIAAGLTVNDWTAFCGSDT 814
            RL    +  +GV+    N Y +V  G      S  +  +  ++   +++  I  + ++G   +GN NG+LLP +T D E + L+ +L D   V+ +  +++ALGN I  N+  AL + + +   E++I + LGVE  R+  IA  I VGS     N+G LVH  TS ++L EL  L  V +  GTVN G   I +GL  ND     G+ T
Sbjct:    5 RLSIFGTDNIGVYIYTNNKYTVVPRG----LDSETKENIVQILGTELIEAEISRSFLLGIFISGNDNGILLPKSTIDDEFRFLKENLRD-CRVEVLNSKVTALGNTILTNNKAALIYPEFNDIEEKIIKETLGVEEIRRGKIAQMITVGSVGVVTNKGGLVHVDTSEKELKELEKLFGVKIDIGTVNFGSVFIRSGLVANDKGTLVGAST 209          
BLAST of EY702419 vs. ExPASy Swiss-Prot
Match: IF6_SULIA (Translation initiation factor 6 OS=Sulfolobus islandicus (strain M.16.27) GN=eif6 PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.742e-20
Identity = 70/210 (33.33%), Postives = 109/210 (51.90%), Query Frame = 2
Query:  194 RLMFENSCEVGVFSKLTNAYCLVAIGGSESFYSTFEAELADVI--PVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQ-TIAGNILVGSYCSFXNRGCLVHPHTSIEDLDELXTLLQVPLVAGTVNRGKRVIAAGLTVNDWTAFCGSDT 814
            RL    +  +GV+    N Y +V  G      S  +  +  ++   +++  I  + ++G   +GN NG+LLP +T D E + L+ +L D   V+ +  +++ALGN I  N+  AL + + +   E++I + LGVE  R+  IA  I VGS     N+G LVH  TS ++L EL  L  V +  GTVN G   I +GL  ND     G+ T
Sbjct:    5 RLSIFGTDNIGVYIYTNNKYTVVPRG----LDSETKENIVQILGTELIEAEISRSFLLGIFISGNDNGILLPKSTIDDEFRFLKENLRD-CRVEVLNSKVTALGNTILTNNKAALIYPEFNDIEEKIIKETLGVEEIRRGKIAQMITVGSVGVVTNKGGLVHVDTSEKELKELEKLFGVKIDIGTVNFGSVFIRSGLVANDKGTLVGAST 209          
BLAST of EY702419 vs. ExPASy Swiss-Prot
Match: IF6_METTH (Translation initiation factor 6 OS=Methanobacterium thermoautotrophicum GN=eif6 PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.275e-20
Identity = 66/210 (31.43%), Postives = 104/210 (49.52%), Query Frame = 2
Query:  185 MATRLMFENSCEVGVFSKLTNAYCLVAIGGSESFYSTFEAELADVIPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVGSYCSFXNRGCLVHPHTSIEDLDELXTLLQVPLVAGTVNRGKRVIAAGLTVNDWTAFCGSDT 814
            M  R+    +  +GV+  +T++  L+     E F       L   + V+K SI G+ + G L  GN NG ++ +   D+E+  L  +  + V   RI ER +A+GN +  ND+ A+    L  +  ++I DVL V+V   T+AG  +VGS  +  NRG L++P  S E++  +   L V    GTVN G  +I A    N      G +T
Sbjct:    1 MIRRINLSGNPNLGVYISVTDSVALIPQNTPEKFEGVLREALE--VEVLKVSISGSSLNGALAVGNSNGFVVSNQAMDREIDALAAAGVEAV---RIPERFTAVGNLVLANDNGAVASPLLSDDALQVIGDVLEVDVKVSTLAGLNIVGSMGAATNRGALLNPQASSEEIGIIEDTLGVEADVGTVNHGVTLIGACSVANSNGVLVGEET 205          
BLAST of EY702419 vs. ExPASy Swiss-Prot
Match: IF6_METAC (Translation initiation factor 6 OS=Methanosarcina acetivorans GN=eif6 PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.275e-20
Identity = 67/198 (33.84%), Postives = 101/198 (51.01%), Query Frame = 2
Query:  221 VGVFSKLTNAYCLVAIGGSESFYSTFEAELADVIPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVGSYCSFXNRGCLVHPHTSIEDLDELXTLLQVPLVAGTVNRGKRVIAAGLTVNDWTAFCGSDT 814
            +GVF+  T    LV         +  E E+ DV  V++T + G+ ++G L  GN NG +LP+     E+Q   +     + V  + +RL+A+GN +  ND  AL H DL  +  E IA  L V+V+R TIAG   VG      N+G LVHP  +  + + L  +   P+  GT N G +++ +GL  N      GS+T
Sbjct:   13 IGVFATCTEDVVLVPPLTKPEVCALLE-EVLDV-RVIETLVNGSIVVGALSRGNSNGFMLPYGAR-AEMQRFTD-----IPVGILPDRLNAVGNIVFANDSAALVHPDLSDKALEAIARTLKVDVYRGTIAGIKNVGMAGVVTNKGLLVHPKVTASEREVLEKIFGFPVNIGTTNFGTQMLGSGLLANSKNFVAGSET 202          
BLAST of EY702419 vs. ExPASy Swiss-Prot
Match: IF6_NITMS (Translation initiation factor 6 OS=Nitrosopumilus maritimus (strain SCM1) GN=eif6 PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.971e-20
Identity = 67/200 (33.50%), Postives = 100/200 (50.00%), Query Frame = 2
Query:  221 VGVFSKLTNAYCLVAIGGSESFYSTFEAELADVIPV--VKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVGSYCSFXNRGCLVHPHTSIEDLDELXTLLQVPLVAGTVNRGKRVIAAGLTVNDWTAFCGSDT 814
            +GV+  + +   L+ +G    F  T   +LA  + V  + TSI  TR+IG LC  N  G+LLP T    E   L+  L  +V V  ++ +L+ALGN I  ND  A+    L +E  + I+DVLGVE  ++ IAG    G      N G  +HP    ED+     LL V +   ++N G   +++G+  N+     GS T
Sbjct:   14 IGVYISVNDNTILLPMG----FAKTKAEKLAKYLGVNYLFTSIANTRLIGALCIMNNKGILLPKTAYQNEFDFLKKELDLEVGV--LDSKLTALGNVICANDKGAVVSPWLSKEDCQTISDVLGVETIQKKIAGFNQTGVVMVANNSGAAIHPEADEEDMKTFSNLLGVKIEQSSINNGIPYVSSGILANNNCIIVGSLT 207          
BLAST of EY702419 vs. ExPASy Swiss-Prot
Match: IF6_METJA (Translation initiation factor 6 OS=Methanocaldococcus jannaschii GN=eif6 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.129e-19
Identity = 72/216 (33.33%), Postives = 111/216 (51.39%), Query Frame = 2
Query:  185 MATRLMFENSCEVGVFSKLTNAYCLVAIGGSESFYSTFEAELADVIPV--VKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPD---QVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVGSYCSFXNRGCLVHPHTSIEDLDELXTLLQVPLVA-GTVNRGKRVIAAGLTVNDWTAFCGSDT 814
            M  R  F     +GV +  T    L+ I   +   +    E+++V+    ++T+IGG+ ++G L   NK GLLLP    D+EL  ++N L +    + V+ I+ + +ALGN I  ND  AL   +L ++ ++ I D L VEV   TIA    VGS     N+GCL HP    ++L+ L +L +V  +  GT N+G   + A +  N   A  G DT
Sbjct:    3 MIIRKYFSGIPTIGVLALTTEEITLLPIFLDKDDVN----EVSEVLETKCLQTNIGGSSLVGSLSVANKYGLLLPKIVEDEELDRIKNFLKENNLDLNVEIIKSKNTALGNLILTNDKGALISPEL-KDFKKDIEDSLNVEVEIGTIAELPTVGSNAVVTNKGCLTHPLVEDDELEFLKSLFKVEYIGKGTANKGTTSVGACIIANSKGAVVGGDT 213          
The following BLAST results are available for this feature:
BLAST of EY702419 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 63
Match NameE-valueIdentityDescription
IF6_SULIY1.021e-2033.33Translation initiation factor 6 OS=Sulfolobus isla... [more]
IF6_SULIN1.021e-2033.33Translation initiation factor 6 OS=Sulfolobus isla... [more]
IF6_SULIL1.021e-2033.33Translation initiation factor 6 OS=Sulfolobus isla... [more]
IF6_SULIM1.742e-2033.33Translation initiation factor 6 OS=Sulfolobus isla... [more]
IF6_SULIK1.742e-2033.33Translation initiation factor 6 OS=Sulfolobus isla... [more]
IF6_SULIA1.742e-2033.33Translation initiation factor 6 OS=Sulfolobus isla... [more]
IF6_METTH2.275e-2031.43Translation initiation factor 6 OS=Methanobacteriu... [more]
IF6_METAC2.275e-2033.84Translation initiation factor 6 OS=Methanosarcina ... [more]
IF6_NITMS2.971e-2033.50Translation initiation factor 6 OS=Nitrosopumilus ... [more]
IF6_METJA1.129e-1933.33Translation initiation factor 6 OS=Methanocaldococ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-006-G05-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702419 ID=EY702419; Name=EY702419; organism=Citrus sinensis; type=EST; length=889bp
CCACGCGTCCGGCAGAAACCCTCTTCTCATCTCATATTGGGTGGGGTTTG
TTTCCGGCCGAAAGGGTAACAAGTGAAGGGCCGCCTCATCATCATTATCA
TCATCGCTTTGGCATTTCGAGTTTTCGACATCGTTTTCCGTCATTTTGCT
TTTTAATCAATTCAATTTCTGTCAATCTGTAATCATGGCAACCAGGCTTA
TGTTTGAGAATTCATGTGAGGTTGGTGTGTTTTCCAAGCTCACTAATGCT
TATTGCTTGGTTGCAATTGGAGGTTCTGAAAGCTTCTACAGCACATTTGA
GGCTGAGTTAGCAGATGTCATTCCTGTTGTTAAAACATCTATTGGTGGCA
CTAGGATTATCGGCCGGCTTTGTGCTGGAAACAAAAATGGGCTTCTCTTG
CCACACACTACCACAGACCAAGAACTTCAACACTTGAGGAACAGCCTACC
TGATCAAGTTGTCGTTCAGCGTATTGAAGAGAGGCTATCTGCCCTGGGCA
ATTGTATAGCATGCAACGACCATGTTGCTCTTACACACACAGATCTTGAC
AGGGAAACAGAGGAAATGATTGCAGATGTTCTTGGAGTAGAAGTTTTTAG
GCAGACAATTGCTGGTAATATCCTTGTTGGCAGTTACTGTTCCTTCNTCA
ACAGAGGATGCTTGGTCCACCCTCACACATCCATTGAAGACTTGGATGAA
CTTTNCACTCTCTTGCAAGTACCTCTGGTGGCTGGGACTGTGAACCGTGG
AAAGCGAGTCATAGCTGCTGGGTTAACTGTGAATGACTGGACAGCATTCT
GTGGATCAGACACACAGCAACTGAACTCTCTGTTATTGAGAGGGTTTCAG
TTGAGGGAGCTCAACTACTGCCCTTGGGACGAGATGAGA
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