CX078413

Overview
NameCX078413
Unique NameCX078413
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length866
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX078413 vs. ExPASy Swiss-Prot
Match: MK09_CHICK (Mitogen-activated protein kinase 9 OS=Gallus gallus GN=MAPK9 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.105e-15
Identity = 61/195 (31.28%), Postives = 95/195 (48.72%), Query Frame = 3
Query:  297 RYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKN---NKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDH--LCSYVQSRSYRAPEVILGLSYDKKIDIW 866
            RY   + +GS A      A D   G++V VK +     N+    ++  E+ LLK VN  +     ++          + + +V EL+ ANL +      +          R+  +  Q L  ++ LH  G+IH DLKP NI+VKS   C +K++D G +     +  +  YV +R YRAPEVILG+ Y + +DIW
Sbjct:   25 RYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIHMELDH--------ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILGMGYKENVDIW 209          
BLAST of CX078413 vs. ExPASy Swiss-Prot
Match: MK08A_CYPCA (Mitogen-activated protein kinase 8A OS=Cyprinus carpio GN=mapk8a PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.105e-15
Identity = 61/195 (31.28%), Postives = 94/195 (48.21%), Query Frame = 3
Query:  297 RYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKN---NKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCS--YVQSRSYRAPEVILGLSYDKKIDIW 866
            RY     +GS A      A+D +   +V +K +     N+    ++  E+ L+KYVN  +     ++          + + +V EL+ ANL +  +   +          RL  +  Q L  ++ LH  G+IH DLKP NI+VKS   C +K++D G +      L    YV +R YRAPEVILG+ Y   +DIW
Sbjct:   25 RYQNLRPIGSGAQGIVCSAYDHNLERNVAIKKLSRPFQNQTHAKRAYRELVLMKYVNHKNIICLLNVFTSQKTLDEFQDVYLVMELMDANLCQVIQMELDH--------ERLSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DCTLKILDFGLARTAATGLLMTPYVVTRYYRAPEVILGMGYQANVDIW 209          
BLAST of CX078413 vs. ExPASy Swiss-Prot
Match: MPK9_ORYSJ (Mitogen-activated protein kinase 9 OS=Oryza sativa subsp. japonica GN=MPK9 PE=3 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 2.750e-15
Identity = 64/207 (30.92%), Postives = 101/207 (48.79%), Query Frame = 3
Query:  291 AGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQS---LDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLG----------SSCFETDHLCSYVQSRSYRAPEVILGL--SYDKKIDIW 866
            A RY + E +G  ++     A DLHT   V +K + N  +    +   L EIKLL+ +   D  +  H++       +++ + +V EL++++L++  K N +   E Y      Q    Q L AL+++H   + H DLKP+NIL    S C++K+ D G          ++ F TD    YV +R YRAPE+       Y   IDIW
Sbjct:  104 ANRYRIQEVIGKGSYGVVCSAIDLHTRQKVAIKKVHNIFEHVSDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDFKD-IYVVFELMESDLHQVIKANDDLTKEHY------QFFLYQLLRALKYIHTASVYHRDLKPKNILAN--SNCKLKICDFGLARVAFNDTPTTVFWTD----YVATRWYRAPELCGSFFSKYTPAIDIW 297          
BLAST of CX078413 vs. ExPASy Swiss-Prot
Match: MPK16_ORYSJ (Mitogen-activated protein kinase 16 OS=Oryza sativa subsp. japonica GN=MPK16 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.750e-15
Identity = 65/207 (31.40%), Postives = 100/207 (48.31%), Query Frame = 3
Query:  291 AGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQS---LDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLG----------SSCFETDHLCSYVQSRSYRAPEVILGL--SYDKKIDIW 866
            A RY VTE +G  ++     A D HTG  V +K I +  +    +   L EIKLL+ +   D  +  H++       +R+ + I+ EL++++L++  K N +       T    Q    Q L  ++++H   + H DLKP+NIL    + C+VK+ D G          S+ F TD    YV +R YRAPE+       Y   IDIW
Sbjct:   19 ASRYEVTEVVGKGSYGVVAAAVDTHTGGRVAIKKINDVFEHISDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFRD-IYIIFELMESDLHQVIKANDD------LTPEHHQFFLYQLLRGMKYIHAASVFHRDLKPKNILAN--ADCKVKICDFGLARVSFDDTPSAIFWTD----YVATRWYRAPELCGSFFSKYTPAIDIW 212          
BLAST of CX078413 vs. ExPASy Swiss-Prot
Match: MK12_DANRE (Mitogen-activated protein kinase 12 OS=Danio rerio GN=mapk12 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.750e-15
Identity = 63/203 (31.03%), Postives = 101/203 (49.75%), Query Frame = 3
Query:  288 IAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKN--NKDFF-DQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYY-----REH-LLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILG-LSYDKKIDIW 866
            +  RY   + +G+ A+     A D  TG  V +K +      D F  ++  E++LLK++ KHD     +++ L D F       R H   +V   +  +L +  K  R S         R+Q +  Q L+ L+++H  G+IH DLKP N+ +     CE+K++D G +      +  YV +R YRAPEVIL  + Y + +DIW
Sbjct:   21 VPDRYKDLKQVGTGAYGTVCYALDRRTGAKVAIKKLHRPFQSDLFAKRAYRELRLLKHM-KHD-----NVIGLVDVFTADLSLDRFHDFYLVMPFMGTDLGKLMKMERLSE-------ERVQYLVYQMLKGLKYIHAAGIIHRDLKPGNLAIN--EECELKILDFGLARQTDSEMTGYVVTRWYRAPEVILSWMHYTQTVDIW 208          
BLAST of CX078413 vs. ExPASy Swiss-Prot
Match: JNK1_CAEEL (Stress-activated protein kinase jnk-1 OS=Caenorhabditis elegans GN=jnk-1 PE=1 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 2.750e-15
Identity = 61/199 (30.65%), Postives = 92/199 (46.23%), Query Frame = 3
Query:  285 VIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKN---NKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLG--SSCFETDHLCSYVQSRSYRAPEVILGLSYDKKIDIW 866
            V+  RY     +GS A      A D      V +K +     N     ++  E+KL+  VN  +     +             L IV EL+ ANL +  + + +          RL  +  Q L  ++ LH  G+IH DLKP NI+V+S   C +K++D G   +  E   +  YV +R YRAPEVILG+ Y + +D+W
Sbjct:  114 VVLKRYQNLRLIGSGAQGIVCSAFDTVRNEQVAIKKLSRPFQNVTHAKRAYRELKLMSLVNHKNIIGILNCFTPQKKLDEFNDLYIVMELMDANLCQVIQMDLDH--------ERLSYLLYQMLCGIRHLHSAGIIHRDLKPSNIVVRS--DCTLKILDFGLARTAIEAFMMTPYVVTRYYRAPEVILGMGYKENVDVW 302          
BLAST of CX078413 vs. ExPASy Swiss-Prot
Match: HOG1_NEUCR (Mitogen-activated protein kinase hog-1 OS=Neurospora crassa GN=hog-1 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.750e-15
Identity = 62/198 (31.31%), Postives = 98/198 (49.49%), Query Frame = 3
Query:  288 IAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIK---NNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYR-EHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVIL-GLSYDKKIDIW 866
            I  RY   + +G  AF     A D  T  +V +K I    +      ++  E+KLLK++ +H+     +++ L D F    E +  V ELL  +L   H+       E  F    +Q    Q +  L+++H  G++H DLKP NILV     C++K+ D G +  +   +  YV +R YRAPE++L    YD ++DIW
Sbjct:   16 ITSRYSDLQPVGMGAFGLVCSAKDQLTNQNVAIKKIMKPFSTPVLAKRTYRELKLLKHL-RHE-----NVISLSDIFISPLEDIYFVTELLGTDL---HRLLTSRPLEKQF----IQYFLYQIMRGLKYVHSAGVVHRDLKPSNILVN--ENCDLKICDFGLARIQDPQMTGYVSTRYYRAPEIMLTWQKYDVEVDIW 198          
BLAST of CX078413 vs. ExPASy Swiss-Prot
Match: HOG1_HORWE (Mitogen-activated protein kinase HOG1 OS=Hortaea werneckii GN=HOG1 PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.750e-15
Identity = 66/200 (33.00%), Postives = 98/200 (49.00%), Query Frame = 3
Query:  288 IAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLD-----EIKLLKYVNKHDPGDKYHLLRLYDYFYYR-EHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVIL-GLSYDKKIDIW 866
            I  RY   + +G  AF     A D  T   V VK I   K F    L      E+KLLK++ +H+     +++ L D F    E + +V ELL  +L   H+       E  F    +Q    Q L  L+++H  G++H DLKP NIL+     C++K+ D G +  +   +  YV +R YRAPE++L    YD ++DIW
Sbjct:   16 ITSRYTDLQPVGMGAFGLVCSAKDQLTSQAVAVKKIM--KPFSTPVLSKRTYRELKLLKHL-RHE-----NIICLSDIFISPLEDMYVVTELLGTDL---HRLLTSRPLEKQF----IQYFLYQILRGLKYVHSAGVVHRDLKPSNILIN--ENCDLKICDFGLARIQDPQMTGYVSTRYYRAPEIMLTWQKYDVEVDIW 198          
BLAST of CX078413 vs. ExPASy Swiss-Prot
Match: HOG1_COCHE (Mitogen-activated protein kinase HOG1 OS=Cochliobolus heterostrophus GN=HOG1 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.750e-15
Identity = 67/200 (33.50%), Postives = 97/200 (48.50%), Query Frame = 3
Query:  288 IAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLD-----EIKLLKYVNKHDPGDKYHLLRLYDYFYYR-EHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVIL-GLSYDKKIDIW 866
            I  RY   + +G  AF     A D  T   V VK I   K F    L      E+KLLK++ +H+     +++ L D F    E +  V ELL  +L   H+       E  F    +Q    Q L  L+++H  G++H DLKP NILV     C++K+ D G +  +   +  YV +R YRAPE++L    YD ++DIW
Sbjct:   16 ITSRYTDLQPVGMGAFGLVCSAKDQLTNQAVAVKKIM--KPFSTPVLSKRTYRELKLLKHL-RHE-----NIISLSDIFISPLEDIYFVTELLGTDL---HRLLTSRPLEKQF----IQYFLYQILRGLKYVHSAGVVHRDLKPSNILVN--ENCDLKICDFGLARIQDPQMTGYVSTRYYRAPEIMLTWQKYDVEVDIW 198          
BLAST of CX078413 vs. ExPASy Swiss-Prot
Match: HOG1_ARXAD (Mitogen-activated protein kinase hog1 OS=Arxula adeninivorans GN=hog1 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.750e-15
Identity = 63/198 (31.82%), Postives = 97/198 (48.99%), Query Frame = 3
Query:  288 IAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIK---NNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYR-EHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVIL-GLSYDKKIDIW 866
            I  RY     +G  AF     A D  T  +V +K I    +      ++  E+KLLK++ +H+     +L+ L D F    E +  V ELL  +L   H+       E  F    +Q    Q L  L+++H  G++H DLKP NIL+     C++K+ D G +  +   +  YV +R YRAPE++L    YD ++DIW
Sbjct:   16 ITSRYVDLNPVGMGAFGLVCSARDQLTNQNVAIKKIMKPFSTPVLAKRTYRELKLLKHL-RHE-----NLITLSDIFISPLEDIYFVTELLGTDL---HRLLTSRPLEHQF----IQYFLYQILRGLKYVHSAGVVHRDLKPSNILIN--ENCDLKICDFGLARIQDPQMTGYVSTRYYRAPEIMLTWQKYDVEVDIW 198          
The following BLAST results are available for this feature:
BLAST of CX078413 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 345
Match NameE-valueIdentityDescription
MK09_CHICK2.105e-1531.28Mitogen-activated protein kinase 9 OS=Gallus gallu... [more]
MK08A_CYPCA2.105e-1531.28Mitogen-activated protein kinase 8A OS=Cyprinus ca... [more]
MPK9_ORYSJ2.750e-1530.92Mitogen-activated protein kinase 9 OS=Oryza sativa... [more]
MPK16_ORYSJ2.750e-1531.40Mitogen-activated protein kinase 16 OS=Oryza sativ... [more]
MK12_DANRE2.750e-1531.03Mitogen-activated protein kinase 12 OS=Danio rerio... [more]
JNK1_CAEEL2.750e-1530.65Stress-activated protein kinase jnk-1 OS=Caenorhab... [more]
HOG1_NEUCR2.750e-1531.31Mitogen-activated protein kinase hog-1 OS=Neurospo... [more]
HOG1_HORWE2.750e-1533.00Mitogen-activated protein kinase HOG1 OS=Hortaea w... [more]
HOG1_COCHE2.750e-1533.50Mitogen-activated protein kinase HOG1 OS=Cochliobo... [more]
HOG1_ARXAD2.750e-1531.82Mitogen-activated protein kinase hog1 OS=Arxula ad... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS08_8H06_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-8H06-P12-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX078413 ID=CX078413; Name=CX078413; organism=Citrus sinensis; type=EST; length=866bp
CAAATAATGCAAATGCTGTAAGATCAGCAAATTCTTCTCCTTCCACCCTT
TCGAATTATGAACGAGAGCATGTAAAGAGAGAGGAAGCTGAAAAAATTAG
TGGCATGAGGGAAGAGGATCCAGGTGCATCCCTTGAGGATGAAGAAGCAG
CTGCAGTACAAGAGCAAGTAAGGCAAATCAAAGCTCAGGAGGAGGAATTT
GAGACTTTCAATTTAAAAATTGTGCATAGAAAAAACAGAACTGGCTTTGA
GGAGGACAAGAATTTCCACGTTGTTTTGAATTCTGTCATAGCTGGGCGTT
ATCATGTTACTGAGTATCTGGGATCAGCTGCGTTTAGCAAAGCTATACAA
GCACATGACCTTCACACAGGCATGGATGTTTGTGTGAAAATTATTAAGAA
CAACAAAGATTTTTTTGATCAAAGCCTCGATGAGATAAAGCTTCTCAAGT
ATGTCAACAAGCATGATCCCGGAGACAAATACCATCTTCTGCGTTTGTAT
GATTATTTCTACTATCGAGAGCATCTGCTAATAGTATGTGAGCTCCTGAA
GGCAAACTTGTATGAGTTCCATAAATTTAATAGAGAATCCGGAGGAGAGG
TCTATTTCACGATGCCAAGGTTGCAGTCTATTACTATCCAGTGTCTTGAA
GCTCTTCAATTCTTGCACGGCCTTGGACTTATTCATTGTGATTTGAAGCC
TGAAAATATCTTAGTGAAAAGTTATAGTAGATGTGAGGTGAAGGTCATTG
ATCTTGGGAGTAGCTGTTTTGAGACAGATCATCTCTGCTCCTATGTTCAA
TCCAGGTCCTATCGTGCACCAGAAGTTATCCTTGGACTGTCATACGATAA
GAAGATAGACATATGG
back to top