CX078413

Overview
NameCX078413
Unique NameCX078413
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length866
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX078413 vs. ExPASy Swiss-Prot
Match: HIPK2_MESAU (Homeodomain-interacting protein kinase 2 OS=Mesocricetus auratus GN=Hipk2 PE=1 SV=2)

HSP 1 Score: 130.954 bits (328), Expect = 8.804e-30
Identity = 80/215 (37.21%), Postives = 122/215 (56.74%), Query Frame = 3
Query:  240 TGFEEDKNFHVVLNSVIAGR---YHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSR--CEVKVIDLGSSCFETDHLCS-YVQSRSYRAPEVILGLSYDKKIDIW 866
            +G   + ++ +V + V+      Y V E+LG   F + ++     T   V +KI+KN+  +  Q   E+ +L  ++  +  D Y+ +R Y+ F ++ H  +V E+L+ NLY+F K N+ S   + +  P LQ    Q   AL  L  LGLIH DLKPENI++   SR    VKVID GS+   +  +CS Y+QSR YRAPE+ILGL + + ID+W
Sbjct:  176 SGSNSEGDYQLVQHEVLCSMTNTYEVLEFLGRGTFGQVVKCWKRGTNEIVAIKILKNHPSYARQGQIEVSILARLST-ESADDYNFVRAYECFQHKNHTCLVFEMLEQNLYDFLKQNKFSPLPLKYIRPVLQ----QVATALMKLKSLGLIHADLKPENIMLVDPSRQPYRVKVIDFGSASHVSKAVCSTYLQSRYYRAPEIILGLPFCEAIDMW 385          
BLAST of CX078413 vs. ExPASy Swiss-Prot
Match: HIPK2_HUMAN (Homeodomain-interacting protein kinase 2 OS=Homo sapiens GN=HIPK2 PE=1 SV=2)

HSP 1 Score: 130.954 bits (328), Expect = 8.804e-30
Identity = 80/215 (37.21%), Postives = 122/215 (56.74%), Query Frame = 3
Query:  240 TGFEEDKNFHVVLNSVIAGR---YHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSR--CEVKVIDLGSSCFETDHLCS-YVQSRSYRAPEVILGLSYDKKIDIW 866
            +G   + ++ +V + V+      Y V E+LG   F + ++     T   V +KI+KN+  +  Q   E+ +L  ++  +  D Y+ +R Y+ F ++ H  +V E+L+ NLY+F K N+ S   + +  P LQ    Q   AL  L  LGLIH DLKPENI++   SR    VKVID GS+   +  +CS Y+QSR YRAPE+ILGL + + ID+W
Sbjct:  176 SGSNSEGDYQLVQHEVLCSMTNTYEVLEFLGRGTFGQVVKCWKRGTNEIVAIKILKNHPSYARQGQIEVSILARLST-ESADDYNFVRAYECFQHKNHTCLVFEMLEQNLYDFLKQNKFSPLPLKYIRPVLQ----QVATALMKLKSLGLIHADLKPENIMLVDPSRQPYRVKVIDFGSASHVSKAVCSTYLQSRYYRAPEIILGLPFCEAIDMW 385          
BLAST of CX078413 vs. ExPASy Swiss-Prot
Match: CLK4_HUMAN (Dual specificity protein kinase CLK4 OS=Homo sapiens GN=CLK4 PE=1 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 8.804e-30
Identity = 75/235 (31.91%), Postives = 127/235 (54.04%), Query Frame = 3
Query:  225 HRKNRT-GFEEDKNFHVVLNS--VIAGRYHVTEYLGSAAFSKAIQAHDLHT-GMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILV-----------------KSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLSYDKKIDIW 866
            HR+ R+   E+D+  H++  S  V+  RY + + LG  AF K ++  D    GM V VKI+KN   + + +  EI++L+++N  DP   +  +++ ++F +  H+ IV ELL  + Y+F K N      + F +  ++ +  Q  +++ FLH   L H DLKPENIL                  ++    ++KV+D GS+ ++ +H  + V +R YRAPEVIL L + +  D+W
Sbjct:  131 HRRKRSRSIEDDEEGHLICQSGDVLRARYEIVDTLGEGAFGKVVECIDHGMDGMHVAVKIVKNVGRYREAARSEIQVLEHLNSTDPNSVFRCVQMLEWFDHHGHVCIVFELLGLSTYDFIKEN----SFLPFQIDHIRQMAYQICQSINFLHHNKLTHTDLKPENILFVKSDYVVKYNSKMKRDERTLKNTDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVW 361          
BLAST of CX078413 vs. ExPASy Swiss-Prot
Match: CLK4_MOUSE (Dual specificity protein kinase CLK4 OS=Mus musculus GN=Clk4 PE=1 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.961e-29
Identity = 74/235 (31.49%), Postives = 127/235 (54.04%), Query Frame = 3
Query:  225 HRKNRT-GFEEDKNFHVVLNS--VIAGRYHVTEYLGSAAFSKAIQAHDLHT-GMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILV-----------------KSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLSYDKKIDIW 866
            HR+ R+   E+D+  H++  S  V+  RY + + LG  AF K ++  D    G+ V VKI+KN   + + +  EI++L+++N  DP   +  +++ ++F +  H+ IV ELL  + Y+F K N      + F +  ++ +  Q  +++ FLH   L H DLKPENIL                  ++    ++KV+D GS+ ++ +H  + V +R YRAPEVIL L + +  D+W
Sbjct:  131 HRRKRSRSIEDDEEGHLICQSGDVLRARYEIVDTLGEGAFGKVVECIDHGMDGLHVAVKIVKNVGRYREAARSEIQVLEHLNSTDPNSVFRCVQMLEWFDHHGHVCIVFELLGLSTYDFIKEN----SFLPFQIDHIRQMAYQICQSINFLHHNKLTHTDLKPENILFVKSDYVVKYNSKMKRDERTLKNTDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVW 361          
BLAST of CX078413 vs. ExPASy Swiss-Prot
Match: HIPK3_RAT (Homeodomain-interacting protein kinase 3 OS=Rattus norvegicus GN=Hipk3 PE=1 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.562e-29
Identity = 85/218 (38.99%), Postives = 123/218 (56.42%), Query Frame = 3
Query:  228 RKNRTGFEEDKNF--HVVLNSVIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSR--CEVKVIDLGSSCFETDHLCS-YVQSRSYRAPEVILGLSYDKKIDIW 866
            ++N T  E D     H VL SV    Y V ++LG   F + ++     T   V +KI+KN+  +  Q   E+ +L  ++  +  D+Y+ +R Y+ F +R H  +V E+L+ NLY+F K N+ S   +    P LQ    Q   AL+ L  LGLIH DLKPENI++    R    VKVID GS+   +  +CS Y+QSR YRAPE+ILGL + + ID+W
Sbjct:  172 KQNCTSGEGDYQLVQHEVLCSV-KNTYEVLDFLGRGTFGQVVKCWKRGTNEIVAIKILKNHPSYARQGQIEVSILARLSTEN-ADEYNFVRAYECFQHRNHTCLVFEMLEQNLYDFLKQNKFSPLPLKVIRPVLQ----QVATALKKLKSLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKTVCSTYLQSRYYRAPEIILGLPFCEAIDMW 383          
BLAST of CX078413 vs. ExPASy Swiss-Prot
Match: HIPK3_MOUSE (Homeodomain-interacting protein kinase 3 OS=Mus musculus GN=Hipk3 PE=1 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 5.707e-29
Identity = 84/218 (38.53%), Postives = 123/218 (56.42%), Query Frame = 3
Query:  228 RKNRTGFEEDKNF--HVVLNSVIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSR--CEVKVIDLGSSCFETDHLCS-YVQSRSYRAPEVILGLSYDKKIDIW 866
            ++N T  E D     H VL S+    Y V ++LG   F + ++     T   V +KI+KN+  +  Q   E+ +L  ++  +  D+Y+ +R Y+ F +R H  +V E+L+ NLY+F K N+ S   +    P LQ    Q   AL+ L  LGLIH DLKPENI++    R    VKVID GS+   +  +CS Y+QSR YRAPE+ILGL + + ID+W
Sbjct:  172 KQNCTSGEGDYQLVQHEVLCSM-KNTYEVLDFLGRGTFGQVVKCWKRGTNEIVAIKILKNHPSYARQGQIEVSILARLSTEN-ADEYNFVRAYECFQHRNHTCLVFEMLEQNLYDFLKQNKFSPLPLKVIRPVLQ----QVATALKKLKSLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKTVCSTYLQSRYYRAPEIILGLPFCEAIDMW 383          
BLAST of CX078413 vs. ExPASy Swiss-Prot
Match: HIPK3_HUMAN (Homeodomain-interacting protein kinase 3 OS=Homo sapiens GN=HIPK3 PE=1 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 9.734e-29
Identity = 80/203 (39.41%), Postives = 117/203 (57.64%), Query Frame = 3
Query:  267 HVVLNSVIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSR--CEVKVIDLGSSCFETDHLCS-YVQSRSYRAPEVILGLSYDKKIDIW 866
            H VL S+    Y V ++LG   F + ++     T   V +KI+KN+  +  Q   E+ +L  ++  +  D+Y+ +R Y+ F +R H  +V E+L+ NLY+F K N+ S   +    P LQ    Q   AL+ L  LGLIH DLKPENI++    R    VKVID GS+   +  +CS Y+QSR YRAPE+ILGL + + ID+W
Sbjct:  187 HEVLCSM-KNTYEVLDFLGRGTFGQVVKCWKRGTNEIVAIKILKNHPSYARQGQIEVSILARLSTEN-ADEYNFVRAYECFQHRNHTCLVFEMLEQNLYDFLKQNKFSPLPLKVIRPILQ----QVATALKKLKSLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKTVCSTYLQSRYYRAPEIILGLPFCEAIDMW 383          
BLAST of CX078413 vs. ExPASy Swiss-Prot
Match: HIPK1_RAT (Homeodomain-interacting protein kinase 1 OS=Rattus norvegicus GN=Hipk1 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.271e-28
Identity = 79/203 (38.92%), Postives = 116/203 (57.14%), Query Frame = 3
Query:  267 HVVLNSVIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSR--CEVKVIDLGSSCFETDHLCS-YVQSRSYRAPEVILGLSYDKKIDIW 866
            H +L S+    Y V E+LG   F +  +     T   V +KI+KN+  +  Q   E+ +L  ++  +  D+Y+ +R Y+ F ++ H  +V E+L+ NLY+F K N+ S   + +  P LQ    Q   AL  L  LGLIH DLKPENI++    R    VKVID GS+   +  +CS Y+QSR YRAPE+ILGL + + ID+W
Sbjct:  180 HEILCSM-TNSYEVLEFLGRGTFGQVAKCWKRSTKEIVAIKILKNHPSYARQGQIEVSILSRLSSEN-ADEYNFVRSYECFQHKNHTCLVFEMLEQNLYDFLKQNKFSPLPLKYIRPILQ----QVATALMKLKSLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCSTYLQSRYYRAPEIILGLPFCEAIDMW 376          
BLAST of CX078413 vs. ExPASy Swiss-Prot
Match: HIPK1_MOUSE (Homeodomain-interacting protein kinase 1 OS=Mus musculus GN=Hipk1 PE=1 SV=2)

HSP 1 Score: 127.102 bits (318), Expect = 1.271e-28
Identity = 79/203 (38.92%), Postives = 116/203 (57.14%), Query Frame = 3
Query:  267 HVVLNSVIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSR--CEVKVIDLGSSCFETDHLCS-YVQSRSYRAPEVILGLSYDKKIDIW 866
            H +L S+    Y V E+LG   F +  +     T   V +KI+KN+  +  Q   E+ +L  ++  +  D+Y+ +R Y+ F ++ H  +V E+L+ NLY+F K N+ S   + +  P LQ    Q   AL  L  LGLIH DLKPENI++    R    VKVID GS+   +  +CS Y+QSR YRAPE+ILGL + + ID+W
Sbjct:  180 HEILCSM-TNSYEVLEFLGRGTFGQVAKCWKRSTKEIVAIKILKNHPSYARQGQIEVSILSRLSSEN-ADEYNFVRSYECFQHKNHTCLVFEMLEQNLYDFLKQNKFSPLPLKYIRPILQ----QVATALMKLKSLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCSTYLQSRYYRAPEIILGLPFCEAIDMW 376          
BLAST of CX078413 vs. ExPASy Swiss-Prot
Match: HIPK1_HUMAN (Homeodomain-interacting protein kinase 1 OS=Homo sapiens GN=HIPK1 PE=1 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.271e-28
Identity = 79/203 (38.92%), Postives = 116/203 (57.14%), Query Frame = 3
Query:  267 HVVLNSVIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSR--CEVKVIDLGSSCFETDHLCS-YVQSRSYRAPEVILGLSYDKKIDIW 866
            H +L S+    Y V E+LG   F +  +     T   V +KI+KN+  +  Q   E+ +L  ++  +  D+Y+ +R Y+ F ++ H  +V E+L+ NLY+F K N+ S   + +  P LQ    Q   AL  L  LGLIH DLKPENI++    R    VKVID GS+   +  +CS Y+QSR YRAPE+ILGL + + ID+W
Sbjct:  180 HEILCSM-TNSYEVLEFLGRGTFGQVAKCWKRSTKEIVAIKILKNHPSYARQGQIEVSILSRLSSEN-ADEYNFVRSYECFQHKNHTCLVFEMLEQNLYDFLKQNKFSPLPLKYIRPILQ----QVATALMKLKSLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSKAVCSTYLQSRYYRAPEIILGLPFCEAIDMW 376          
The following BLAST results are available for this feature:
BLAST of CX078413 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 345
Match NameE-valueIdentityDescription
HIPK2_MESAU8.804e-3037.21Homeodomain-interacting protein kinase 2 OS=Mesocr... [more]
HIPK2_HUMAN8.804e-3037.21Homeodomain-interacting protein kinase 2 OS=Homo s... [more]
CLK4_HUMAN8.804e-3031.91Dual specificity protein kinase CLK4 OS=Homo sapie... [more]
CLK4_MOUSE1.961e-2931.49Dual specificity protein kinase CLK4 OS=Mus muscul... [more]
HIPK3_RAT2.562e-2938.99Homeodomain-interacting protein kinase 3 OS=Rattus... [more]
HIPK3_MOUSE5.707e-2938.53Homeodomain-interacting protein kinase 3 OS=Mus mu... [more]
HIPK3_HUMAN9.734e-2939.41Homeodomain-interacting protein kinase 3 OS=Homo s... [more]
HIPK1_RAT1.271e-2838.92Homeodomain-interacting protein kinase 1 OS=Rattus... [more]
HIPK1_MOUSE1.271e-2838.92Homeodomain-interacting protein kinase 1 OS=Mus mu... [more]
HIPK1_HUMAN1.271e-2838.92Homeodomain-interacting protein kinase 1 OS=Homo s... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_8H06_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-8H06-P12-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX078413 ID=CX078413; Name=CX078413; organism=Citrus sinensis; type=EST; length=866bp
CAAATAATGCAAATGCTGTAAGATCAGCAAATTCTTCTCCTTCCACCCTT
TCGAATTATGAACGAGAGCATGTAAAGAGAGAGGAAGCTGAAAAAATTAG
TGGCATGAGGGAAGAGGATCCAGGTGCATCCCTTGAGGATGAAGAAGCAG
CTGCAGTACAAGAGCAAGTAAGGCAAATCAAAGCTCAGGAGGAGGAATTT
GAGACTTTCAATTTAAAAATTGTGCATAGAAAAAACAGAACTGGCTTTGA
GGAGGACAAGAATTTCCACGTTGTTTTGAATTCTGTCATAGCTGGGCGTT
ATCATGTTACTGAGTATCTGGGATCAGCTGCGTTTAGCAAAGCTATACAA
GCACATGACCTTCACACAGGCATGGATGTTTGTGTGAAAATTATTAAGAA
CAACAAAGATTTTTTTGATCAAAGCCTCGATGAGATAAAGCTTCTCAAGT
ATGTCAACAAGCATGATCCCGGAGACAAATACCATCTTCTGCGTTTGTAT
GATTATTTCTACTATCGAGAGCATCTGCTAATAGTATGTGAGCTCCTGAA
GGCAAACTTGTATGAGTTCCATAAATTTAATAGAGAATCCGGAGGAGAGG
TCTATTTCACGATGCCAAGGTTGCAGTCTATTACTATCCAGTGTCTTGAA
GCTCTTCAATTCTTGCACGGCCTTGGACTTATTCATTGTGATTTGAAGCC
TGAAAATATCTTAGTGAAAAGTTATAGTAGATGTGAGGTGAAGGTCATTG
ATCTTGGGAGTAGCTGTTTTGAGACAGATCATCTCTGCTCCTATGTTCAA
TCCAGGTCCTATCGTGCACCAGAAGTTATCCTTGGACTGTCATACGATAA
GAAGATAGACATATGG
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