CX078413

Overview
NameCX078413
Unique NameCX078413
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length866
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX078413 vs. ExPASy Swiss-Prot
Match: CLK3_HUMAN (Dual specificity protein kinase CLK3 OS=Homo sapiens GN=CLK3 PE=1 SV=3)

HSP 1 Score: 115.161 bits (287), Expect = 4.999e-25
Identity = 73/233 (31.33%), Postives = 115/233 (49.36%), Query Frame = 3
Query:  228 RKNRTGFEEDKNFHVV--LNSVIAGRYHVTEYLGSAAFSKAIQAHDLHTGMD-VCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILV-----------------KSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLSYDKKIDIW 866
            +++    E+DK  H+V  +   +  RY +   LG   F K ++  D   G   V +KII+N   + + +  EI +LK + + D  +K+  + + D+F +  H+ I  ELL  N +EF K N        + +P ++ +  Q   AL+FLH   L H DLKPENIL                  KS     ++V D GS+ F+ +H  + V +R YR PEVIL L + +  D+W
Sbjct:  278 KRSSRSVEDDKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQP----YPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVW 506          
BLAST of CX078413 vs. ExPASy Swiss-Prot
Match: CLK3_BOVIN (Dual specificity protein kinase CLK3 OS=Bos taurus GN=CLK3 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 4.999e-25
Identity = 73/233 (31.33%), Postives = 115/233 (49.36%), Query Frame = 3
Query:  228 RKNRTGFEEDKNFHVV--LNSVIAGRYHVTEYLGSAAFSKAIQAHDLHTGMD-VCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILV-----------------KSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLSYDKKIDIW 866
            +++    E+DK  H+V  +   +  RY +   LG   F K ++  D   G   V +KII+N   + + +  EI +LK + + D  +K+  + + D+F +  H+ I  ELL  N +EF K N        + +P ++ +  Q   AL+FLH   L H DLKPENIL                  KS     ++V D GS+ F+ +H  + V +R YR PEVIL L + +  D+W
Sbjct:  130 KRSSRSVEDDKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQP----YPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVW 358          
BLAST of CX078413 vs. ExPASy Swiss-Prot
Match: AFC3_ARATH (Serine/threonine-protein kinase AFC3 OS=Arabidopsis thaliana GN=AFC3 PE=2 SV=2)

HSP 1 Score: 115.161 bits (287), Expect = 4.999e-25
Identity = 74/230 (32.17%), Postives = 123/230 (53.48%), Query Frame = 3
Query:  249 EEDKNFHVV--LNSVIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKS-----------------YSRC-----EVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLSYDKKIDIW 866
            ++D++ H V  L   +  RY +   +G   F + ++  D  T   V +KII++ K + D ++ EI +L+ + K D G +   +++ ++F YR H+ IV E L  +L++F K N+ S     F +  ++    Q LE++ ++H L L+H DLKPENIL+ S                 + RC      +K+ID GS+  +     S VQ+R YR+PEVILGL +  + D+W
Sbjct:   52 DDDRDGHYVFSLRDNLTPRYKILSKMGEGTFGRVLECWDRDTKEYVAIKIIRSIKKYRDAAMIEIDVLQKLVKSDKG-RTRCVQMKNWFDYRNHICIVFEKLGPSLFDFLKRNKYSA----FPLALVRDFGCQLLESVAYMHELQLVHTDLKPENILLVSSENVKLPDNKRSAANETHFRCLPKSSAIKLIDFGSTVCDNRIHHSIVQTRHYRSPEVILGLGWSYQCDLW 276          
BLAST of CX078413 vs. ExPASy Swiss-Prot
Match: KNS1_YEAST (Dual specificity protein kinase KNS1 OS=Saccharomyces cerevisiae GN=KNS1 PE=1 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 1.455e-24
Identity = 76/267 (28.46%), Postives = 128/267 (47.94%), Query Frame = 3
Query:  171 RQIKAQEEEFETFNLKIVHRKNRTGFEEDKNFHVVL--NSVIA--GRYHVTEYLGSAAFSKAIQAHD-LHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILV------------------------------KSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLSYDKKIDIW 866
            +QI +   +F +         N++ F+ DK+ H V   N +    GR+ V + LG   F K ++  D  +    V VK+I+    + + +  E+++L+ +  +DP  ++  L L + F Y+ H+ +V +L   ++Y+F   N    G   F    +Q+I  Q + ++ FLH LG+IH DLKPENIL+                              K     E+K+ID GS+ F  ++    + +R YRAPE++LGL +    DIW
Sbjct:  266 KQIGSSLRKFTSNGSSESASSNKSNFKTDKDGHYVYQENDIFGSGGRFVVKDLLGQGTFGKVLKCIDNKYEPNYVAVKVIRAVDRYREAAKTELRILQTILNNDPQGQFQCLLLRECFDYKNHICLVTDLYGRSIYDFMCSN----GIARFPGSHIQAIARQLIRSVCFLHDLGIIHTDLKPENILICDETHIAQKLPLKTVQSLSKRRREASKGKRKILKNPEIKIIDFGSAIFHYEYHPPVISTRHYRAPEIVLGLGWSFPCDIW 528          
BLAST of CX078413 vs. ExPASy Swiss-Prot
Match: PRP4_SCHPO (Serine/threonine-protein kinase prp4 OS=Schizosaccharomyces pombe GN=prp4 PE=1 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 4.232e-24
Identity = 67/202 (33.17%), Postives = 106/202 (52.48%), Query Frame = 3
Query:  264 FHVVLNSVIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDH-LCSYVQSRSYRAPEVILGLSYDKKIDIW 866
            + VVL   +  RY V   LG   FS  + A D +      +KII+NN+  + + L E+ +L+ +   D   K H++    +F ++ HL +V E+L  NL +  K   + G  V  ++  ++    Q   AL  L    +IH D+KP+N+LV    R  +K+ DLGS+   +++ +  Y+ SR YRAPE+ILG  Y   ID W
Sbjct:  147 YKVVLMEELDSRYIVQSNLGKGMFSTVVSALDRNRNQTFAIKIIRNNEVMYKEGLKEVSILERLQAADREGKQHIIHYERHFMHKNHLCMVFEMLSLNLRDILK---KFGRNVGLSIKAVRLYAYQMFMALDLLKQCNVIHSDIKPDNMLVNE-KRNILKICDLGSASDASENEITPYLVSRFYRAPEIILGFPYSCPIDTW 344          
BLAST of CX078413 vs. ExPASy Swiss-Prot
Match: DOA_DROME (Serine/threonine-protein kinase Doa OS=Drosophila melanogaster GN=Doa PE=1 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 4.232e-24
Identity = 66/225 (29.33%), Postives = 121/225 (53.78%), Query Frame = 3
Query:  249 EEDKNFHVVLNS--VIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENIL-----------------VKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLSYDKKIDIW 866
            ++D + H++ ++  ++  RY +   LG   F + ++  D+     + +KIIKN + + + +  EI  L+ + + DP   +  +++ D+F Y  H+ IV E+L  ++++   F RE+  E Y  + +++ +  Q   +++FLH   L H DLKPENIL                 V+     +V++ID GS+ F+ +H  + V +R YRAPEVIL L + +  D+W
Sbjct:  460 QDDADGHLIYHTGDILHHRYKIMATLGEGTFGRVVKVKDMERDYCMALKIIKNVEKYREAAKLEINALEKIAQKDPHCDHLCVKMIDWFDYHGHMCIVFEMLGLSVFD---FLRENNYEPY-PLDQVRHMAYQLCYSVKFLHDNRLTHTDLKPENILFVDSDYTSHYNHKINREVRRVKNTDVRLIDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVW 680          
BLAST of CX078413 vs. ExPASy Swiss-Prot
Match: PRP4B_DICDI (Serine/threonine-protein kinase prpf4B OS=Dictyostelium discoideum GN=prpf4B PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 5.527e-24
Identity = 62/196 (31.63%), Postives = 106/196 (54.08%), Query Frame = 3
Query:  288 IAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNK--HDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSC-FETDHLCSYVQSRSYRAPEVILGLSYDKKIDIW 866
            I  +Y +   +GS  FS  + A +  T  DV +KII+N        L EI++L+ ++        K H +++ D+F YR HL IV E +  +L   H+  ++ G ++  ++  ++    Q   AL+ +    ++H D+KP+NI+V   ++  +K++D GS+       +  Y+ SR YRAPE+ILG  YD  ID+W
Sbjct:  486 IMDKYQIFSPIGSGVFSTVVSAKETKTNEDVVIKIIRNRPSMHRSGLKEIEILQKISNTPTSSNQKSHCIQMKDHFNYRNHLCIVFEPMSMSL---HQLIKKYGKDIGLSLNAVRVYAKQLFLALKHIKNSKILHADIKPDNIVVNE-AKNTIKIVDFGSAGEIHESEITPYLVSRFYRAPEIILGHKYDYSIDVW 677          
BLAST of CX078413 vs. ExPASy Swiss-Prot
Match: AFC1_ARATH (Serine/threonine-protein kinase AFC1 OS=Arabidopsis thaliana GN=AFC1 PE=2 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 7.982e-23
Identity = 66/231 (28.57%), Postives = 116/231 (50.22%), Query Frame = 3
Query:  249 EEDKNFHVVLNSVIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEV-------------------------KVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLSYDKKIDIW 866
            ++D ++  V+   +  RY +   +G   F + ++  D      V +K+I++   + + ++ EI +L+ + +HD G     +++ ++F YR H+ IV E L  +LY+F + N        F +  ++ +  Q LE++ ++H L LIH DLKPENIL+ S    ++                         K+ID GS+ FE       V +R YRAPEVILG+ ++   D+W
Sbjct:   98 DKDGHYVFVVGDTLTPRYQILSKMGEGTFGQVLECFDNKNKEVVAIKVIRSINKYREAAMIEIDVLQRLTRHDVGGS-RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRS----FPIDLVRELGRQLLESVAYMHDLRLIHTDLKPENILLVSSEYIKIPDYKFLSRPTKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHNYIVSTRHYRAPEVILGVGWNYPCDLW 323          
BLAST of CX078413 vs. ExPASy Swiss-Prot
Match: HOG1_SCHPO (Mitogen-activated protein kinase sty1 OS=Schizosaccharomyces pombe GN=sty1 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.544e-17
Identity = 66/198 (33.33%), Postives = 100/198 (50.51%), Query Frame = 3
Query:  288 IAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIK---NNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYR-EHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVIL-GLSYDKKIDIW 866
            I  RY   + +G  AF     A D  TGM+V VK I    +      ++  E+KLLK++ +H+     +++ L D F    E +  V ELL  +L   H+       E  F    +Q    Q L  L+F+H  G+IH DLKP NIL+     C++K+ D G +  +   +  YV +R YRAPE++L    Y+ ++DIW
Sbjct:   16 ITTRYSDLQPIGMGAFGLVCSAKDQLTGMNVAVKKIMKPFSTPVLAKRTYRELKLLKHL-RHE-----NIISLSDIFISPFEDIYFVTELLGTDL---HRLLTSRPLETQF----IQYFLYQILRGLKFVHSAGVIHRDLKPSNILIN--ENCDLKICDFGLARIQDPQMTGYVSTRYYRAPEIMLTWQKYNVEVDIW 198          
BLAST of CX078413 vs. ExPASy Swiss-Prot
Match: MPK11_ORYSJ (Mitogen-activated protein kinase 11 OS=Oryza sativa subsp. japonica GN=MPK11 PE=2 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 1.458e-16
Identity = 67/206 (32.52%), Postives = 104/206 (50.49%), Query Frame = 3
Query:  297 RYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQS---LDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLG----------SSCFETDHLCSYVQSRSYRAPEVILGLSYDK---KIDIW 866
            RY V E +G  ++     A+D+HTG  V +K I N  +    +   L EIKLL+ +   D  +  H++       +R+ + +V EL++++L++  K N +   E Y      Q    Q L AL+++H   + H DLKP+NIL    + C++K+ D G          ++ F TD    YV +R YRAPE + G  Y K    IDIW
Sbjct:   25 RYEVLEVIGKGSYGLVCSANDIHTGEKVAIKKIHNIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSKMDFRD-IYVVFELMESDLHQVIKANDDLTREHY------QFFLYQMLRALKYIHTANVYHRDLKPKNILAN--ANCKLKICDFGLARVAFTDAPTTVFWTD----YVATRWYRAPE-LCGSFYSKYTPAIDIW 216          
The following BLAST results are available for this feature:
BLAST of CX078413 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 345
Match NameE-valueIdentityDescription
CLK3_HUMAN4.999e-2531.33Dual specificity protein kinase CLK3 OS=Homo sapie... [more]
CLK3_BOVIN4.999e-2531.33Dual specificity protein kinase CLK3 OS=Bos taurus... [more]
AFC3_ARATH4.999e-2532.17Serine/threonine-protein kinase AFC3 OS=Arabidopsi... [more]
KNS1_YEAST1.455e-2428.46Dual specificity protein kinase KNS1 OS=Saccharomy... [more]
PRP4_SCHPO4.232e-2433.17Serine/threonine-protein kinase prp4 OS=Schizosacc... [more]
DOA_DROME4.232e-2429.33Serine/threonine-protein kinase Doa OS=Drosophila ... [more]
PRP4B_DICDI5.527e-2431.63Serine/threonine-protein kinase prpf4B OS=Dictyost... [more]
AFC1_ARATH7.982e-2328.57Serine/threonine-protein kinase AFC1 OS=Arabidopsi... [more]
HOG1_SCHPO6.544e-1733.33Mitogen-activated protein kinase sty1 OS=Schizosac... [more]
MPK11_ORYSJ1.458e-1632.52Mitogen-activated protein kinase 11 OS=Oryza sativ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_8H06_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-8H06-P12-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX078413 ID=CX078413; Name=CX078413; organism=Citrus sinensis; type=EST; length=866bp
CAAATAATGCAAATGCTGTAAGATCAGCAAATTCTTCTCCTTCCACCCTT
TCGAATTATGAACGAGAGCATGTAAAGAGAGAGGAAGCTGAAAAAATTAG
TGGCATGAGGGAAGAGGATCCAGGTGCATCCCTTGAGGATGAAGAAGCAG
CTGCAGTACAAGAGCAAGTAAGGCAAATCAAAGCTCAGGAGGAGGAATTT
GAGACTTTCAATTTAAAAATTGTGCATAGAAAAAACAGAACTGGCTTTGA
GGAGGACAAGAATTTCCACGTTGTTTTGAATTCTGTCATAGCTGGGCGTT
ATCATGTTACTGAGTATCTGGGATCAGCTGCGTTTAGCAAAGCTATACAA
GCACATGACCTTCACACAGGCATGGATGTTTGTGTGAAAATTATTAAGAA
CAACAAAGATTTTTTTGATCAAAGCCTCGATGAGATAAAGCTTCTCAAGT
ATGTCAACAAGCATGATCCCGGAGACAAATACCATCTTCTGCGTTTGTAT
GATTATTTCTACTATCGAGAGCATCTGCTAATAGTATGTGAGCTCCTGAA
GGCAAACTTGTATGAGTTCCATAAATTTAATAGAGAATCCGGAGGAGAGG
TCTATTTCACGATGCCAAGGTTGCAGTCTATTACTATCCAGTGTCTTGAA
GCTCTTCAATTCTTGCACGGCCTTGGACTTATTCATTGTGATTTGAAGCC
TGAAAATATCTTAGTGAAAAGTTATAGTAGATGTGAGGTGAAGGTCATTG
ATCTTGGGAGTAGCTGTTTTGAGACAGATCATCTCTGCTCCTATGTTCAA
TCCAGGTCCTATCGTGCACCAGAAGTTATCCTTGGACTGTCATACGATAA
GAAGATAGACATATGG
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