CX078354
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX078354 vs. ExPASy Swiss-Prot
Match: RLA0_RANSY (60S acidic ribosomal protein P0 OS=Rana sylvatica GN=RPLP0 PE=2 SV=1) HSP 1 Score: 224.942 bits (572), Expect = 4.324e-58 Identity = 115/225 (51.11%), Postives = 152/225 (67.56%), Query Frame = 2 Query: 173 KASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTAL 847 + +A K Y K+ QLL++Y + + ADNVGS Q+Q IR LRG +VVLMGKNTMM++ IR H E N+A L+P ++GNVG +FTK DL A AR G +AP DV VP NTGL P +TSFFQ L I TKI++GT+EI++ V+LI+ GDKVG+SEA LL L I PFS+GL++Q VY+NGS+YSPEVLD++ED L +F V + ++ Sbjct: 3 REDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLEN--NSALEKLLPHIKGNVGFVFTKEDLAEVRDMLLANKVPASARAGAIAPCDVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLIIQQVYDNGSIYSPEVLDITEDALRARFLEGVRNIASV 225
BLAST of CX078354 vs. ExPASy Swiss-Prot
Match: RLA0_ICTPU (60S acidic ribosomal protein P0 OS=Ictalurus punctatus GN=rplp0 PE=2 SV=1) HSP 1 Score: 224.942 bits (572), Expect = 4.324e-58 Identity = 116/225 (51.56%), Postives = 151/225 (67.11%), Query Frame = 2 Query: 173 KASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTAL 847 + +A K Y K+ QLL +Y + + ADNVGS Q+Q IR LRG ++VLMGKNTMM++ IR H E N A L+P ++GNVG +FTK DL A AR G +AP +V VP NTGL P +TSFFQ L I TKI++GT+EI++ V+LIR GDKVG+SEA LL L I PFSYGL++Q VY+NGSVYSPEVLD++ED L ++F V + ++ Sbjct: 3 REDRATWKSNYFLKIIQLLNDYPKCFIVGADNVGSKQMQTIRLSLRGKAIVLMGKNTMMRKAIRGHLEN--NPALEKLLPHIRGNVGFVFTKEDLPEVRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIRPGDKVGASEATLLNMLNISPFSYGLIIQQVYDNGSVYSPEVLDITEDALHKRFLEGVRNIASV 225
BLAST of CX078354 vs. ExPASy Swiss-Prot
Match: RLA0_CHICK (60S acidic ribosomal protein P0 OS=Gallus gallus GN=RPLP0 PE=2 SV=1) HSP 1 Score: 222.246 bits (565), Expect = 2.803e-57 Identity = 115/225 (51.11%), Postives = 152/225 (67.56%), Query Frame = 2 Query: 173 KASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTAL 847 + +A K Y K+ QLL++Y + V ADNVGS Q+Q IR LRG +VVLMGKNTMM++ IR H E N A L+P ++GNVG +FTK DL A AR G +AP DV VP NTGL P +TSFFQ L I TKI++GT+EI++ V+LI+ GDKVG+SEA LL L I PFS+GLV+Q V++NGS+Y+PEVLD++E+ L ++F V V ++ Sbjct: 3 REDRATWKSNYFMKIIQLLDDYPKCFVVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLEN--NPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCDVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHKRFLEGVRNVASV 225
BLAST of CX078354 vs. ExPASy Swiss-Prot
Match: RLA0_HUMAN (60S acidic ribosomal protein P0 OS=Homo sapiens GN=RPLP0 PE=1 SV=1) HSP 1 Score: 219.935 bits (559), Expect = 1.391e-56 Identity = 113/225 (50.22%), Postives = 151/225 (67.11%), Query Frame = 2 Query: 173 KASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTAL 847 + +A K Y K+ QLL++Y + + ADNVGS Q+Q IR LRG +VVLMGKNTMM++ IR H E N A L+P ++GNVG +FTK DL A AR G +AP +V VP NTGL P +TSFFQ L I TKI++GT+EI++ V+LI+ GDKVG+SEA LL L I PFS+GLV+Q V++NGS+Y+PEVLD++E+ L +F V V ++ Sbjct: 3 REDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLEN--NPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASV 225
BLAST of CX078354 vs. ExPASy Swiss-Prot
Match: RLA0_BOVIN (60S acidic ribosomal protein P0 OS=Bos taurus GN=RPLP0 PE=2 SV=3) HSP 1 Score: 219.935 bits (559), Expect = 1.391e-56 Identity = 113/225 (50.22%), Postives = 151/225 (67.11%), Query Frame = 2 Query: 173 KASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTAL 847 + +A K Y K+ QLL++Y + + ADNVGS Q+Q IR LRG +VVLMGKNTMM++ IR H E N A L+P ++GNVG +FTK DL A AR G +AP +V VP NTGL P +TSFFQ L I TKI++GT+EI++ V+LI+ GDKVG+SEA LL L I PFS+GLV+Q V++NGS+Y+PEVLD++E+ L +F V V ++ Sbjct: 3 REDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLEN--NPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASV 225
BLAST of CX078354 vs. ExPASy Swiss-Prot
Match: RLA0_PIG (60S acidic ribosomal protein P0 OS=Sus scrofa GN=RPLP0 PE=2 SV=2) HSP 1 Score: 219.55 bits (558), Expect = 1.817e-56 Identity = 112/225 (49.78%), Postives = 151/225 (67.11%), Query Frame = 2 Query: 173 KASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTAL 847 + +A K Y K+ QLL++Y + + ADNVGS Q+Q IR LRG +VVLMGKNTMM++ IR H E N A L+P ++GNVG +FTK DL A AR G +AP +V VP NTGL P +TSFFQ L I TKI++GT+EI++ V+LI+ GDKVG+SEA LL L I PFS+GL++Q V++NGS+Y+PEVLD++E+ L +F V V ++ Sbjct: 3 REDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLEN--NPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLIIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASV 225
BLAST of CX078354 vs. ExPASy Swiss-Prot
Match: RLA0_CAEEL (60S acidic ribosomal protein P0 OS=Caenorhabditis elegans GN=rpa-0 PE=1 SV=3) HSP 1 Score: 219.55 bits (558), Expect = 1.817e-56 Identity = 109/227 (48.02%), Postives = 156/227 (68.72%), Query Frame = 2 Query: 167 VVKASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTAL 847 +V+ ++ K Y KL +L EEY + L+ DNVGS Q+Q IR+ +RG + +LMGKNTM+++ +R H K N + L+P + NVG +FTK DL GAPA+ G +AP DV +PP NTG+ P +TSFFQ L IPTKI +GT+EI+ V LI++GDKVG+SE+ALL LG+ PFSYGLVV+ VY++G++Y+PEVLD++ ++L ++F S V V ++ Sbjct: 1 MVREDRSTWKANYFTKLVELFEEYPKCLLVGVDNVGSKQMQEIRQAMRGHAEILMGKNTMIRKALRGHLGK--NPSLEKLLPHIVENVGFVFTKEDLGEIRSKLLENRKGAPAKAGAIAPCDVKLPPQNTGMGPEKTSFFQALQIPTKIARGTIEILNDVHLIKEGDKVGASESALLNMLGVTPFSYGLVVRQVYDDGTLYTPEVLDMTTEELRKRFLSGVRNVASV 225
BLAST of CX078354 vs. ExPASy Swiss-Prot
Match: RLA0_RAT (60S acidic ribosomal protein P0 OS=Rattus norvegicus GN=Rplp0 PE=1 SV=2) HSP 1 Score: 219.164 bits (557), Expect = 2.372e-56 Identity = 113/225 (50.22%), Postives = 150/225 (66.67%), Query Frame = 2 Query: 173 KASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTAL 847 + +A K Y K+ QLL++Y + + ADNVGS Q+Q IR LRG +VVLMGKNTMM++ IR H E N A L+P ++GNVG +FTK DL A AR G +AP +V VP NTGL P +TSFFQ L I TKI++GT+EI++ V+LI+ GDKVG+SEA LL L I PFS+GL++Q V++NGS+YSPEVLD++E L +F V V ++ Sbjct: 3 REDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLEN--NPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLIIQQVFDNGSIYSPEVLDITEQALHTRFLEGVRNVASV 225
BLAST of CX078354 vs. ExPASy Swiss-Prot
Match: RLA0_MOUSE (60S acidic ribosomal protein P0 OS=Mus musculus GN=Rplp0 PE=1 SV=3) HSP 1 Score: 218.394 bits (555), Expect = 4.047e-56 Identity = 112/225 (49.78%), Postives = 150/225 (66.67%), Query Frame = 2 Query: 173 KASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTAL 847 + +A K Y K+ QLL++Y + + ADNVGS Q+Q IR LRG +VVLMGKNTMM++ IR H E N A L+P ++GNVG +FTK DL A AR G +AP +V VP NTGL P +TSFFQ L I TKI++GT+EI++ V+LI+ GDKVG+SEA LL L I PFS+GL++Q V++NGS+Y+PEVLD++E L +F V V ++ Sbjct: 3 REDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLEN--NPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLIIQQVFDNGSIYNPEVLDITEQALHSRFLEGVRNVASV 225
BLAST of CX078354 vs. ExPASy Swiss-Prot
Match: RLA0_DANRE (60S acidic ribosomal protein P0 OS=Danio rerio GN=rplp0 PE=2 SV=1) HSP 1 Score: 218.009 bits (554), Expect = 5.285e-56 Identity = 115/228 (50.44%), Postives = 152/228 (66.67%), Query Frame = 2 Query: 173 KASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAAL---LAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTAL 847 + +A K Y K+ QLL+++ + + ADNVGS Q+Q IR LRG +VVLMGKNTMM++ IR H E N A L+P ++GNVG +FTK DL A AR G +AP +V VP NTGL P +TSFFQ L I TKI++GT+EI++ V+LI+ GDKVG+SEA L L L I PFSYGL++Q VY+NGSVYSPEVLD++ED L ++F V + ++ Sbjct: 3 REDRATWKSNYFLKIIQLLDDFPKCFIVGADNVGSKQMQTIRLSLRGKAVVLMGKNTMMRKAIRGHLEN--NPALERLLPHIRGNVGFVFTKEDLTEVRDLLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKPGDKVGASEATLLNMLNMLNISPFSYGLIIQQVYDNGSVYSPEVLDITEDALHKRFLKGVRNIASV 228 The following BLAST results are available for this feature:
BLAST of CX078354 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 74
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Sequences
The
following sequences are available for this feature:
EST sequence >CX078354 ID=CX078354; Name=CX078354; organism=Citrus sinensis; type=EST; length=847bpback to top |