CX078354
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX078354 vs. ExPASy Swiss-Prot
Match: RLA0_METBF (Acidic ribosomal protein P0 homolog OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rplP0 PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 8.537e-14 Identity = 48/195 (24.62%), Postives = 90/195 (46.15%), Query Frame = 2 Query: 215 LCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQT-SFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSE 796 + +L++ + + + + + ++Q IRR L+ +V+ + +N++ +R + E + + L L+FT +P + G +AP D++V G T P Q IP I+ G V + + + G+ V A +L KL I P GL +++VY+NG++Y PE+L + E Sbjct: 22 IMELIQSHKVFGMVGIEGILATKIQKIRRDLKDVAVLKVSRNSLTERALNQLGE-----SIPEMNKYLDKQTALVFTNESPFKLYKVLEQTKTPSPIKGGAIAPADIIVQKGPTSFPPGPILGELQSAGIPASIDAGKVAVKETKVVCKAGEVVSQKLATMLTKLEIYPLIVGLDLRAVYDNGAIYEPELLAIDE 211
BLAST of CX078354 vs. ExPASy Swiss-Prot
Match: RLA0_THEAC (Acidic ribosomal protein P0 homolog OS=Thermoplasma acidophilum GN=rplP0 PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.902e-13 Identity = 58/217 (26.73%), Postives = 98/217 (45.16%), Query Frame = 2 Query: 221 QLLEEYTQIL-----VAAADNVG--SNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPS-QTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTAL 847 +L+ E TQ + VA D G + Q+Q+IR RG + + K T++ + + E G+ L G + L+ + + R G +AP D+V+ P TG P + FQ + + T + KG + I ++KG+ + +A +L L I+P GL + +Y G VYS EVL L+ + + A++ S A+ Sbjct: 10 ELVNEITQRIKASRSVAIVDTAGIRTRQIQDIRGKNRGKINLKVIKKTLLFKAL----ENLGDEKLSKLKENSGGQIALLTSDLEPTEIYKIIESTFQKTAPRGGEIAPEDIVIQPMTTGFPPGPMMTEFQKVGLQTGVEKGKIAIKKETVFVKKGETIPKDKAKILEMLEIKPLEVGLQLLGLYSEGVVYSKEVLSLTPERIANDMAAAFSQAKAI 222
BLAST of CX078354 vs. ExPASy Swiss-Prot
Match: RLA0_METMA (Acidic ribosomal protein P0 homolog OS=Methanosarcina mazei GN=rplP0 PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.902e-13 Identity = 48/193 (24.87%), Postives = 89/193 (46.11%), Query Frame = 2 Query: 221 QLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQ-TSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSE 796 +L++ + + + + + ++Q IRR L+ +V+ + +NT+ +R + E + + L LIFT +P + G +AP D++V G T P Q IP I+ G V + + + G+ V A +L+KL I P GL +++ Y++G++Y PE+L + E Sbjct: 24 ELIQSHKVFGMVRIEGILATKIQKIRRDLKDVAVLKVSRNTLTERALNQLGE-----SIPEMTRYLDNQTALIFTNESPFKLYKLLEQTKTPSPIKAGAIAPEDIIVQKGPTSFPPGPILGELQSAGIPASIDAGKVAVKETKVVCKAGEAVPQKLATMLSKLEIYPLIVGLDLRAAYDDGTIYEPELLAVDE 211
BLAST of CX078354 vs. ExPASy Swiss-Prot
Match: RLA0_THEVO (Acidic ribosomal protein P0 homolog OS=Thermoplasma volcanium GN=rplP0 PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.244e-13 Identity = 52/211 (24.64%), Postives = 97/211 (45.97%), Query Frame = 2 Query: 191 KKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPS-QTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFA 820 KK ++L Q + + + + V + Q+Q+IR R + + K T++ + + + + L G + ++ ++ D A R G VAP D+ V P TG P + FQ + + T + KG + I L++KG+ + +A ++A L I+P GL + +Y +G +YS +VL L+ + + E+ A Sbjct: 7 KKKEIVSELAQDITKSKAVAIVDIKGVRTRQMQDIRAKNRDKVKIKVVKKTLLFKAL----DSINDEKLTKLKDATTGQIAVLTSQLDPTEIYQMVQATLTKASPRGGEVAPADITVEPMVTGFPPGPMMTEFQKVGLQTGVEKGKIAIKKEAVLVKKGEVIPKDKAKIMAMLDIKPLEVGLELLGLYSDGVLYSADVLSLTPEKIAEQMA 213
BLAST of CX078354 vs. ExPASy Swiss-Prot
Match: RLA0_SULTO (Acidic ribosomal protein P0 homolog OS=Sulfolobus tokodaii GN=rplP0 PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.244e-13 Identity = 58/207 (28.02%), Postives = 91/207 (43.96%), Query Frame = 2 Query: 185 AEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQT-SFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDD 802 A+ KI +L Q L EY I++A + +++L +IR+ +RG + + + KNT+ A K L P L G IFT + A G A +VV+P G+TG+ S F L I TK+ G + + + + GD + +L KLGI P L ++ Y+NG + L ++ DD Sbjct: 14 AKWKIEEVKELEQKLREYHTIIIANIEGFPADKLHDIRKKMRGMAEIKVTKNTLFGI-----AAKNAGLDVSKLEPYLTGPNAFIFTNKNPFEIQLFLSKFKLKRYAMPGDKADEEVVIPAGDTGMPAGPALSIFGKLKIKTKVQDGKIHVTQDTVIAKPGDPIPPDAIPILQKLGIMPVHIKLNIKVAYDNGLIIPGNQLSINLDD 215
BLAST of CX078354 vs. ExPASy Swiss-Prot
Match: RLA0_METAC (Acidic ribosomal protein P0 homolog OS=Methanosarcina acetivorans GN=rplP0 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 7.227e-13 Identity = 49/193 (25.39%), Postives = 87/193 (45.08%), Query Frame = 2 Query: 221 QLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQ-TSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSE 796 +L++ + + + + + ++Q IRR L+ +V+ + +NT+ +R + E + L LIFT +P R G +AP D+ V G T P Q IP I+ G V + + + G+ V A +L+KL I P GL +++ Y++G++Y PE+L + E Sbjct: 24 ELIQSHKVFGMVGIEGILATKMQKIRRDLKDVAVLKVSRNTLTERALNQLGE-----TIPGMKEYLDKQTALIFTNESPFKLYKLLEQTKTPSPIRGGAIAPADITVQKGPTSFPPGPILGELQSAGIPASIDAGKVAVKETKVVCKAGEVVPQKLATMLSKLEIYPLIVGLDLRAAYDDGTIYEPELLAVDE 211
BLAST of CX078354 vs. ExPASy Swiss-Prot
Match: RLA0_SULIY (Acidic ribosomal protein P0 homolog OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=rplP0 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.103e-12 Identity = 55/204 (26.96%), Postives = 91/204 (44.61%), Query Frame = 2 Query: 185 AEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQT-SFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLS 793 A K+ +L +L++ IL+ + + +++L IR+ LRG +++ + KNT+ K A K + L L G IFTK + A G A +V++P G+TG+ S F L + TK+ G V ++ + + GD + + +L KLGI P L ++ Y G V E L L+ Sbjct: 14 ASWKLEEVKELTELIKNSNTILIGSLEGFPADKLHEIRKKLRGKAIIKVTKNTLFKI-----AAKNAGISTEKLEQYLTGPNVFIFTKDNPFLTNMFFENYKLRRYAMPGDKAEEEVIIPAGDTGMPAGPILSVFGKLKVQTKVQDGKVHVVKDTVVAKPGDVIPTEALPILQKLGIMPVYVKLKIKVAYHEGLVIPAENLKLN 212
BLAST of CX078354 vs. ExPASy Swiss-Prot
Match: RLA0_SULIN (Acidic ribosomal protein P0 homolog OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=rplP0 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.103e-12 Identity = 55/204 (26.96%), Postives = 91/204 (44.61%), Query Frame = 2 Query: 185 AEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQT-SFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLS 793 A K+ +L +L++ IL+ + + +++L IR+ LRG +++ + KNT+ K A K + L L G IFTK + A G A +V++P G+TG+ S F L + TK+ G V ++ + + GD + + +L KLGI P L ++ Y G V E L L+ Sbjct: 14 ASWKLEEVKELTELIKNSNTILIGSLEGFPADKLHEIRKKLRGKAIIKVTKNTLFKI-----AAKNAGISTEKLEQYLTGPNVFIFTKDNPFLTNMFFENYKLRRYAMPGDKAEEEVIIPAGDTGMPAGPILSVFGKLKVQTKVQDGKVHVVKDTVVAKPGDVIPTEALPILQKLGIMPVYVKLKIKVAYHEGLVIPAENLKLN 212
BLAST of CX078354 vs. ExPASy Swiss-Prot
Match: RLA0_SULIL (Acidic ribosomal protein P0 homolog OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=rplP0 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.103e-12 Identity = 55/204 (26.96%), Postives = 91/204 (44.61%), Query Frame = 2 Query: 185 AEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQT-SFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLS 793 A K+ +L +L++ IL+ + + +++L IR+ LRG +++ + KNT+ K A K + L L G IFTK + A G A +V++P G+TG+ S F L + TK+ G V ++ + + GD + + +L KLGI P L ++ Y G V E L L+ Sbjct: 14 ASWKLEEVKELTELIKNSNTILIGSLEGFPADKLHEIRKKLRGKAIIKVTKNTLFKI-----AAKNAGISTEKLEQYLTGPNVFIFTKDNPFLTNMFFENYKLRRYAMPGDKAEEEVIIPAGDTGMPAGPILSVFGKLKVQTKVQDGKVHVVKDTVVAKPGDVIPTEALPILQKLGIMPVYVKLKIKVAYHEGLVIPAENLKLN 212
BLAST of CX078354 vs. ExPASy Swiss-Prot
Match: RLA0_SULIM (Acidic ribosomal protein P0 homolog OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=rplP0 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.746e-12 Identity = 55/204 (26.96%), Postives = 90/204 (44.12%), Query Frame = 2 Query: 185 AEKKIAYDAKLCQLLEEYTQILVAAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPGNTGLDPSQT-SFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLS 793 A K+ +L +L++ IL+ + + +++L IR+ LRG +++ + KNT+ K A K L L G IFTK + A G A +V++P G+TG+ S F L + TK+ G V ++ + + GD + + +L KLGI P L ++ Y G V E L L+ Sbjct: 14 ASWKLEEVKELTELIKNSNTILIGSLEGFPADKLHEIRKKLRGKAIIKVTKNTLFKI-----AAKNAGINIEKLEQYLTGPNVFIFTKDNPFLTNMFFENYKLRRYAMPGDKAEEEVIIPAGDTGMPAGPILSVFGKLKVQTKVQDGKVHVVKDTVVAKPGDVIPTEALPILQKLGIMPVYVKLKIKVAYHEGLVIPAENLKLN 212 The following BLAST results are available for this feature:
BLAST of CX078354 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 74
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Sequences
The
following sequences are available for this feature:
EST sequence >CX078354 ID=CX078354; Name=CX078354; organism=Citrus sinensis; type=EST; length=847bpback to top |