CX078279
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX078279 vs. ExPASy Swiss-Prot
Match: DNLI2_THEPD (DNA ligase 2 OS=Thermofilum pendens (strain Hrk 5) GN=lig2 PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 8.964e-38 Identity = 61/167 (36.53%), Postives = 96/167 (57.49%), Query Frame = 1 Query: 277 DLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTEVWEVKAADLTISPVHRAAIGVVDPDKGIS 777 D ++ F + A+ CEG++ K++ + Y+ R W+K K+DY + D++DLV + FHGRGKR G YGA L+A YD + F+++CK+GTGF++ L + L IP P R I DVWF P V E+ A++T+SP+H A+ ++ G++ Sbjct: 397 DAKDLLHFFEQAISEGCEGVMCKSIGPGSIYQMGARGWLWIKFKRDYRMEMTDTVDLVVVGGFHGRGKRAGTYGALLMAAYDPETDTFKTVCKVGTGFTDEDLAKLPELLDPYKIPHRHP--RVFSKIEADVWFVPAVVLEIIGAEITLSPLHTCALNKLEEGAGLA 561 HSP 2 Score: 48.521 bits (114), Expect = 8.964e-38 Identity = 26/68 (38.24%), Postives = 44/68 (64.71%), Query Frame = 3 Query: 6 VRSFVLDCEIVAYDREKQKILPFQTLSTRARK-NVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRR 206 VR +++ EIVAY+ + ++LPFQ L R RK +V + + V +Y FD++Y +G+ L+++ L RR Sbjct: 306 VREAIVEGEIVAYNPDTGEMLPFQELMHRRRKYDVEKAMKEYPVRVYLFDVIYMDGEELIEKPLDQRR 373
BLAST of CX078279 vs. ExPASy Swiss-Prot
Match: DNLI_CALMQ (DNA ligase OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=lig PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.521e-37 Identity = 63/167 (37.72%), Postives = 101/167 (60.48%), Query Frame = 1 Query: 277 DLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTEVWEVKAADLTISPVHRAAIGVVDPDKGIS 777 D D ++KF A+ + CEG++ K++ + YE R W+K K+DY + D++DLV + AF GRGKR G YGA LLA YD ++++F ++CK+G+GF++ L++ L IP P R + PD+WF P V E+ A++T+SP+H ++ D G++ Sbjct: 397 DADSLEKFFLDAISSGCEGVMCKSVKLGSVYEMGARGWLWIKYKRDYKSELSDTMDLVVVGAFWGRGKRAGTYGALLLAAYDPDSDQFYTVCKVGSGFTDEDLKKLPQMLEPYKIPHRHP--RVVSKMEPDIWFTPGLVLEITGAEITMSPLHTCCSVMLKGDVGLA 561 HSP 2 Score: 40.817 bits (94), Expect = 1.521e-37 Identity = 24/69 (34.78%), Postives = 39/69 (56.52%), Query Frame = 3 Query: 15 FVLDCEIVAYDREKQKILPFQTLSTRARK-NVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLY 218 F+++ E VA D + + PFQ L R RK N+ + + + +Y FD++Y NGQ L L R++ L+ Sbjct: 310 FIVEGEGVAIDPDTGEFKPFQELMHRKRKHNIKEAIEEYPINLYLFDVMYVNGQDLTDLPLPDRKKVLF 378
BLAST of CX078279 vs. ExPASy Swiss-Prot
Match: DNLI_PERMH (Probable DNA ligase OS=Persephonella marina (strain DSM 14350 / EX-H1) GN=lig PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.583e-37 Identity = 60/166 (36.14%), Postives = 104/166 (62.65%), Query Frame = 1 Query: 277 DLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTEVWEVKAADLTISPVHRAAIGVVDPDKGI 774 ++++++ F A++ CEGL+ K++ +D+ Y+ KR W+K K+DY + D+LDLV + AF+G+G RTG +G+ L+ACYD ++F+++CK+GTGF E ++ L+ + P R +S D+W+EP V E+ A+LT+SPVH + ++G+ Sbjct: 381 NVEDLESFFHQAIEDGCEGLVCKSLQKDSIYQAGKRGFLWIKYKRDYKSHLADTLDLVVVGAFYGKGARTGYFGSLLMACYDPETDQFKTVCKVGTGFKEDDFKKLDDLLKEHTLDHKHP--RVNSILSADIWYEPFLVLEITGAELTLSPVHTCGWDRIKINRGL 544 HSP 2 Score: 34.6538 bits (78), Expect = 2.583e-37 Identity = 22/72 (30.56%), Postives = 36/72 (50.00%), Query Frame = 3 Query: 18 VLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKV-DVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFE 230 +++ E V D I PFQ L R K V+ I + + + FDI+Y NG+ L + RR+ L ++ + Sbjct: 295 IIELEAVVIDPSSGAIRPFQDLMNRRVKYVTRFHIMMYPIAGFIFDIMYLNGEDLTLKPYPERRKILEENIK 366
BLAST of CX078279 vs. ExPASy Swiss-Prot
Match: DNLI_HYPBU (DNA ligase OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=lig PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 2.141e-36 Identity = 66/179 (36.87%), Postives = 105/179 (58.66%), Query Frame = 1 Query: 241 DFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTEVWEVKAADLTISPVHRAAIGVVDPDKGIS 777 D ++ A + + D E++ F A++ EG++ K + + Y+ R W+K K+DY + D++DLV I AF+G+G+R G +GA L+A YD + + F+S+CK+G+GF++ LE L+ + K +P R + PDVW EPT V E+ A+LT+SP+H G V GIS Sbjct: 388 DTWRIAEGIVTSDPQELESFFLKAIEDGAEGVMAKAIHDRSIYQAGARGWLWIKYKRDYKSEMSDTVDLVVIGAFYGKGRRGGKFGALLMAAYDPDTDTFKSVCKVGSGFTDEDLERLDDMLKPYISDK-KP-ARVDSQMKPDVWVEPTLVAEIIGAELTLSPIHTCCYGWVKSGAGIS 564 HSP 2 Score: 43.1282 bits (100), Expect = 2.141e-36 Identity = 27/73 (36.99%), Postives = 39/73 (53.42%), Query Frame = 3 Query: 18 VLDCEIVAYDREKQKILPFQTLSTRAR-KNVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEE 233 +++ EIVA D E + PFQ L R R K+V ++ V ++ FD LY NG+ L + L R E L E+ Sbjct: 314 IVEGEIVAIDPETGEFRPFQVLMHRRRKKDVHAVLSEIPVAVFLFDTLYVNGEDLTLKPLPARHEVLEKIIEQ 386
BLAST of CX078279 vs. ExPASy Swiss-Prot
Match: DNLI_AQUAE (Probable DNA ligase OS=Aquifex aeolicus GN=lig PE=3 SV=2) HSP 1 Score: 135.576 bits (340), Expect = 6.166e-36 Identity = 60/166 (36.14%), Postives = 103/166 (62.05%), Query Frame = 1 Query: 277 DLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTEVWEVKAADLTISPVHRAAIGVVDPDKGI 774 ++++++ F A++ CEGL+ K++ ++ Y+ KR W+K K+DY + D+LDLV + F+G+G+R G +G+ L+ACYD ++ F+++ K+GTGF+E ++ L + + P R + D+WFEP V E+ A+LT+SPVH G V P++GI Sbjct: 381 NVEDLENFFYQAIEEGCEGLVCKSLAPNSIYQAGKRGFLWIKYKRDYKSVLADTLDLVVVGGFYGKGQRKGTFGSLLMACYDPESDMFKTVTKVGTGFTEDDFKKLEEILMPRKLNHRHP--RVNSILEADMWFEPYLVLEITGAELTLSPVHTCGWGKVSPNRGI 544 HSP 2 Score: 36.965 bits (84), Expect = 6.166e-36 Identity = 25/68 (36.76%), Postives = 35/68 (51.47%), Query Frame = 3 Query: 15 FVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDI-KVDVCIYAFDILYRNGQPLLQEQLRVRREHL 215 F+++ E V D +I PFQ L R K V+ I K V + FDI+Y +G+ L + RRE L Sbjct: 294 FIVELEAVVIDPASGEIRPFQELMHRKVKYVTKYHITKYPVAGFLFDIIYLDGEDLTLKPYPERREIL 361
BLAST of CX078279 vs. ExPASy Swiss-Prot
Match: DNLI_THEAC (DNA ligase OS=Thermoplasma acidophilum GN=lig PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.540e-35 Identity = 74/194 (38.14%), Postives = 115/194 (59.28%), Query Frame = 1 Query: 196 EFVESIFMIHLRKSLDFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTEVWEVKAADLTISPVHRAAIGVVDPDKGIS 777 + +ESIF D F+ A + S D E+ +F ++A++ CEGL+ K+ D+ Y+ R W+KLK+DY + D+LDL + AF+G G+R G YGA LLA Y+ N+ F+++CK+G+GFS+ +L + + K +P R + PDVWF P V EV A++T+SP+H A G ++ D G+S Sbjct: 361 KILESIFT-----ESDSFRLAKRIESGDPAEVHRFFNSAIEDGCEGLVAKSTSPDSFYKAGARGWLWIKLKRDYQAQLWDTLDLTVVGAFYGHGRRKGTYGALLLATYNDKNDTFETVCKLGSGFSDDVLFSLPKKF-EQYVSKEKP-ARVISNLEPDVWFYPAVVMEVIGAEITVSPIHTCAYGEIEKDSGLS 547
BLAST of CX078279 vs. ExPASy Swiss-Prot
Match: DNLI_ACIAM (DNA ligase OS=Acidianus ambivalens GN=lig PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 3.921e-35 Identity = 55/165 (33.33%), Postives = 104/165 (63.03%), Query Frame = 1 Query: 241 DFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTEVWEVKAADLTISPVH 735 D+ AT + + +++++++F A+ EG+++K++ DA Y+ R W+K K+DY + D++DLV + AFHG+G++ G Y +FL+A Y+ + + F+++CK+ +GF++A L++ + + + P+ R T+ PDVW P V E+ A++TISP+H Sbjct: 381 DYVHIATHIITDNVEKLKEFFYQAISEGAEGVMVKSLAPDAIYQAGSRGWLWIKFKRDYQSEMADTVDLVMVGAFHGKGRKGGKYSSFLMAAYNPDKDVFETVCKVASGFTDAELDDLQKKIAE--LKRDTPHPRVVSTMVPDVWLTPALVAEIIGAEITISPLH 543 HSP 2 Score: 39.2762 bits (90), Expect = 3.921e-35 Identity = 24/74 (32.43%), Postives = 39/74 (52.70%), Query Frame = 3 Query: 15 FVLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIK-VDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEE 233 F+++ EI+ D E ++ PFQ L R RK+ IK V ++ FD++Y G+ + L RR+ L E+ Sbjct: 306 FIVEGEIIPVDPETGEMRPFQELMHRKRKSDIHEAIKEYPVNVFLFDLMYYEGEDYTVKPLSERRKKLESIVED 379
BLAST of CX078279 vs. ExPASy Swiss-Prot
Match: DNLI_SULTO (DNA ligase OS=Sulfolobus tokodaii GN=lig PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 8.665e-35 Identity = 63/182 (34.62%), Postives = 104/182 (57.14%), Query Frame = 1 Query: 232 KSLDFFQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTEVWEVKAADLTISPVHRAAIGVVDPDKGIS 777 K D A + + ++D++ +F A+ EG+++K++ +D+ Y+ R W+KLK+DY + DS+DLV + AF+GRGKR G + L+A YD + F+++CK+ +GFS+A L+E L + K P R + PD+W EP V E+ A++T+SP H +V G+S Sbjct: 377 KPNDKLHIAHHIYTNNVDKLMEFFYDAISNGAEGVMVKSVAKDSIYQAGSRGFLWIKLKRDYQSEMADSVDLVVVGAFYGRGKRGGKLSSLLMAAYDPETDTFKTVCKVASGFSDAELDELQKKLMEIKLDKKDP--RVDSQLEPDIWVEPKYVAEIIGAEITLSPEHTCCKDMVSKGAGLS 556 HSP 2 Score: 38.1206 bits (87), Expect = 8.665e-35 Identity = 25/67 (37.31%), Postives = 34/67 (50.75%), Query Frame = 3 Query: 18 VLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIK-VDVCIYAFDILYRNGQPLLQEQLRVRREHL 215 +++ EIVA D E +I PFQ L R RKN IK V +Y FD++ + L RR+ L Sbjct: 306 IIEGEIVAVDPESNEIRPFQELMHRKRKNDINEAIKEYPVNVYLFDLMLYEDADYTMKPLPERRKKL 372
BLAST of CX078279 vs. ExPASy Swiss-Prot
Match: DNLI2_KORCO (DNA ligase 2 OS=Korarchaeum cryptofilum (strain OPF8) GN=lig2 PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 7.177e-34 Identity = 56/167 (33.53%), Postives = 94/167 (56.29%), Query Frame = 1 Query: 277 DLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTEVWEVKAADLTISPVHRAAIGVVDPDKGIS 777 +++E+++F + AV+ EGL++K D + Y+ R +W+KLK+ YI + + +DLV + AF G+GKR G YGA L+A Y + F+++CK+G+GF++ L L I P I DV+F P +V +V ++T+SP H V + G++ Sbjct: 386 NVEELERFFEHAVEMGTEGLVVK--DPKSIYQAGVRGWSWIKLKRSYISKMIEPVDLVVVGAFWGKGKRAGTYGALLMAAYSPEEDVFKTVCKMGSGFTDEELARMPKLLEDYKIDHKHP--SVISNIEADVYFVPVKVAQVLGDEITLSPTHTCGWNKVRKNAGLA 548 HSP 2 Score: 53.1434 bits (126), Expect = 7.177e-34 Identity = 33/73 (45.21%), Postives = 44/73 (60.27%), Query Frame = 3 Query: 18 VLDCEIVAYDREKQKILPFQTLSTRARKNVSLSDIKVDVCI-YAFDILYRNGQPLLQEQLRVRREHLYDSFEE 233 VLDCE VA + + +ILPFQ L R RK +K + YAFD+LY +G+ LL EQL RR+ L + +E Sbjct: 299 VLDCETVAINPDTGEILPFQELMHRRRKYGVEEAMKTYPTVTYAFDLLYLDGRELLDEQLDDRRKILKEILKE 371
BLAST of CX078279 vs. ExPASy Swiss-Prot
Match: DNLI_IGNH4 (DNA ligase OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=lig PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 9.347e-34 Identity = 58/177 (32.77%), Postives = 95/177 (53.67%), Query Frame = 1 Query: 247 FQFATTLTSIDLDEIQKFLDAAVDASCEGLIIKTMDRDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTEVWEVKAADLTISPVHRAAIGVVDPDKGIS 777 F +T +E+++F ++ EGL++K + + Y+ R W+K KKDY + + +DLV + AF+GRG+R G +GA L+A YD + F ++CK+G+GFS+ L L+ + P R + PDVW P V E+ A++T+SP+H A V G++ Sbjct: 381 FSLSTAKLVSTPEELEQFFHQSISEGHEGLVVKAVHDKSVYQAGARGWLWIKYKKDYKSEMVEPVDLVVVGAFYGRGRRGGTFGALLVAGYDEKRDAFATVCKVGSGFSDEELARLPELLKPYISETKPP--RVISNVKPDVWVRPALVAEIIGAEITLSPIHTCAKDEVSAGSGLA 555 HSP 2 Score: 45.0542 bits (105), Expect = 9.347e-34 Identity = 26/77 (33.77%), Postives = 46/77 (59.74%), Query Frame = 3 Query: 18 VLDCEIVAYDREKQKILPFQTLSTRARK-NVSLSDIKVDVCIYAFDILYRNGQPLLQEQLRVRREHLYDSFEEEPGF 245 +++ EI+A + E + PFQ L R RK +V+L+ ++ V + FDI+Y +G+ + + L +RR+ L + EE F Sbjct: 305 IVEGEIIAVNPETGEPRPFQELMRRRRKHDVALAMSEIPVNVKLFDIIYVDGEDMTNKPLPLRRKRLEEVVEESEEF 381 The following BLAST results are available for this feature:
BLAST of CX078279 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 100
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Sequences
The
following sequences are available for this feature:
EST sequence >CX078279 ID=CX078279; Name=CX078279; organism=Citrus sinensis; type=EST; length=777bpback to top |