CX078278
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX078278 vs. ExPASy Swiss-Prot
Match: DNLI_PICTO (DNA ligase OS=Picrophilus torridus GN=lig PE=3 SV=2) HSP 1 Score: 166.007 bits (419), Expect = 2.206e-40 Identity = 75/172 (43.60%), Postives = 116/172 (67.44%), Query Frame = -2 Query: 288 DATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTEVWEVKAADLTISPVHRAAIGVVDPDKGISLRFPRLIRVREDKTPEQASSSEQVAEMYTAQK 803 D+ Y R W+K K+DY + DSLDLV + AF G G+R G +GA LLACY+S ++ F+++CK+G+GF++ ML E L K++ K +P R ++ PD W P+ V E++ A++T+SPVH A+ +++ G++LRFPRLI+ R+DK PE A+++ ++ EMY AQK Sbjct: 410 DSIYRAGARGWLWIKFKRDYQSELSDSLDLVVVGAFDGHGRRKGTFGALLLACYNSKDDTFETVCKLGSGFTDEMLSEMPRLLGDKIVEK-KP-ARVNSSMEPDHWIYPSLVLEIRGAEITVSPVHTCAMNIIEKGSGLALRFPRLIKPRDDKKPEDATTTNEIIEMYKAQK 579
BLAST of CX078278 vs. ExPASy Swiss-Prot
Match: DNLI_PYRCJ (DNA ligase OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=lig PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 8.383e-40 Identity = 80/172 (46.51%), Postives = 111/172 (64.53%), Query Frame = -2 Query: 288 ATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTEVWEVKAADLTISPVHRAAIGVVDPDKGISLRFPRLI-RVREDKTPEQASSSEQVAEMYTAQK 800 +TYE R NW+K K+DY + D++DLV + AFHGRGKR G+YGAFLLA YD + + F ++CK+G+GF++A L L+ IP P R + PDVWF P V EV A++T+SP+H IG V P G+++RFPR R R DK PE A++++++ EMY QK Sbjct: 409 STYEMGARGWNWIKYKRDYRSEMIDTVDLVVVGAFHGRGKRAGLYGAFLLAAYDPSTDMFYTVCKVGSGFTDADLRRMYDMLQPLKIPHRHP--RVVSKMQPDVWFVPQVVIEVIGAEITLSPLHTCCIGAVKPGVGLAIRFPRFTGRYRTDKRPEDATTTKELVEMYQRQK 578
BLAST of CX078278 vs. ExPASy Swiss-Prot
Match: DNLI_THENV (DNA ligase OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=lig PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.697e-38 Identity = 77/170 (45.29%), Postives = 111/170 (65.29%), Query Frame = -2 Query: 288 YEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTEVWEVKAADLTISPVHRAAIGVVDPDKGISLRFPRLI-RVREDKTPEQASSSEQVAEMYTAQK 794 YE R NW+K K+DY + D++DLV + AF+GRGKR G+YGAFLLA YD + F ++CK+G+GF++A L++ L+ IP P R ++PDVWF P V EV A++T+SP+H +G V P G+++RFPR R R DK+PEQA++ ++ E+Y QK Sbjct: 411 YEMGARGWNWIKYKRDYKSEMIDTVDLVVVGAFYGRGKRAGLYGAFLLAAYDPQTDMFYTVCKVGSGFTDADLKKMYEVLQPYKIPHRHP--RVVSKMTPDVWFTPQVVIEVIGAEITLSPLHTCCLGAVRPGVGLAIRFPRFTGRYRTDKSPEQATTPAEMVELYKRQK 578
BLAST of CX078278 vs. ExPASy Swiss-Prot
Match: DNLI_PYRIL (DNA ligase OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=lig PE=3 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 3.522e-38 Identity = 77/172 (44.77%), Postives = 111/172 (64.53%), Query Frame = -2 Query: 288 ATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTEVWEVKAADLTISPVHRAAIGVVDPDKGISLRFPRLI-RVREDKTPEQASSSEQVAEMYTAQK 800 + YE R NW+K K+DY + D++DLV + AF+GRGKR G+YGAFLLA YD + F ++CK+G+GF++A L++ L+ IP P R + PDVWF P V EV A++T+SP+H +G V P G+++RFPR R R DK+PEQA++ ++ E+Y QK Sbjct: 409 SVYEMGARGWNWIKYKRDYKSEMIDTVDLVVVGAFYGRGKRAGLYGAFLLAAYDPATDMFYTVCKVGSGFTDADLKKMYEMLQPYKIPHRHP--RVVSKMEPDVWFTPQVVIEVIGAEITLSPLHTCCLGAVKPGVGLAIRFPRFTGRYRTDKSPEQATTVSEMIELYKRQK 578
BLAST of CX078278 vs. ExPASy Swiss-Prot
Match: DNLI_AERPE (DNA ligase OS=Aeropyrum pernix GN=lig PE=3 SV=2) HSP 1 Score: 157.918 bits (398), Expect = 6.008e-38 Identity = 74/172 (43.02%), Postives = 109/172 (63.37%), Query Frame = -2 Query: 291 RDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTEVWEVKAADLTISPVHRAAIGVVDPDKGISLRFPRLIRVREDKTPEQASSSEQVAEMYTAQ 806 RD+ Y R W+KLK+DY + D++DLV + AF+GRGKR G + L+A YD + + F ++CK+ TGF++ L+ + L+ +IP+ P R I PDVW EP V E+ A+LT+SP+H + V P GIS+RFPR IR R+DK+PE A+++ ++ EMY Q Sbjct: 422 RDSVYTAGVRGWLWVKLKRDYKSEMMDTVDLVVVGAFYGRGKRGGKLSSLLMAAYDPDRDVFPTVCKVATGFTDEELDRMNEMLKKHIIPRKHP--RVESRIEPDVWVEPALVAEILGAELTLSPMHTCCLNTVRPGVGISIRFPRFIRWRDDKSPEDATTTHELLEMYKRQ 591
BLAST of CX078278 vs. ExPASy Swiss-Prot
Match: DNLI_PYRAE (DNA ligase OS=Pyrobaculum aerophilum GN=lig PE=3 SV=2) HSP 1 Score: 156.762 bits (395), Expect = 1.338e-37 Identity = 77/170 (45.29%), Postives = 110/170 (64.71%), Query Frame = -2 Query: 288 YEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTEVWEVKAADLTISPVHRAAIGVVDPDKGISLRFPRLI-RVREDKTPEQASSSEQVAEMYTAQK 794 YE R NW+K K+DY + D++DLV + AFHGRGKR G+YGAFLLA YD + + F ++CK+G+GF++A L++ L+ IP P R + DVWF P V EV A++T+SP+H +G V P G+++RFPR R R DK+PEQA++ ++ E+Y QK Sbjct: 411 YEMGARGWNWIKYKRDYRSEMIDTVDLVVVGAFHGRGKRAGLYGAFLLAAYDPSTDMFYTVCKVGSGFTDADLKKMYEILQPFKIPHRHP--RVVSKMEADVWFVPQVVIEVIGAEITLSPLHTCCLGAVRPGVGLAVRFPRFTGRYRSDKSPEQATTVAEMLELYKRQK 578
BLAST of CX078278 vs. ExPASy Swiss-Prot
Match: DNLI_CENSY (DNA ligase OS=Cenarchaeum symbiosum GN=lig PE=3 SV=2) HSP 1 Score: 154.451 bits (389), Expect = 6.643e-37 Identity = 80/180 (44.44%), Postives = 113/180 (62.78%), Query Frame = -2 Query: 267 DATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTEVWEVKAADLTISPVHRAAIGVVDPDKGISLRFPRLI-RVREDKTPEQASSSEQVAEMYTAQKLNHPNNQ 803 DA Y R WLKLK++Y +GDSLDLV I AF G+G+RTG YG LLA YD + + F SICK+GTGF++ L++ L +V K P R + DVWF+P V EV A+++T+SPVH+ A+ V G++LRFP+ ++R +KT E AS+ ++V +Y +QK P+ Q Sbjct: 409 DAPYRAGSRGGYWLKLKREYRNELGDSLDLVIIGAFFGKGRRTGRYGTLLLATYDDSRDTFPSICKVGTGFTDEDLDQLYQLLSPRVTLKRNP--RIDSGMEADVWFDPEVVMEVVASEITLSPVHKTALDSVRKGAGLALRFPKFTGKLRTEKTAEDASTDQEVIALYKSQKKVVPDGQ 586
BLAST of CX078278 vs. ExPASy Swiss-Prot
Match: DNLI_PYRAR (DNA ligase OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=lig PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 8.675e-37 Identity = 76/170 (44.71%), Postives = 111/170 (65.29%), Query Frame = -2 Query: 288 YEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTEVWEVKAADLTISPVHRAAIGVVDPDKGISLRFPRLI-RVREDKTPEQASSSEQVAEMYTAQK 794 YE R NW+K K+DY + D++DLV + AF+GRGKR G+YGAFLLA YD +++ F ++CK+G+GF++A L++ L+ IP P R + + DVWF P V EV A++T+SP+H +G V P G+++RFPR R R DK PEQA++ ++ E+Y QK Sbjct: 411 YEMGARGWNWIKYKRDYKSEMIDTVDLVVVGAFYGRGKRAGLYGAFLLAAYDPSSDMFYTVCKVGSGFTDADLKKMYEILQPLKIPHRHP--RVSSKMEADVWFVPQVVIEVIGAEITLSPLHTCCLGAVRPGVGLAVRFPRFTGRYRTDKGPEQATTVAEMLELYKRQK 578
BLAST of CX078278 vs. ExPASy Swiss-Prot
Match: DNLI_SULAC (DNA ligase OS=Sulfolobus acidocaldarius GN=lig PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.480e-36 Identity = 72/172 (41.86%), Postives = 109/172 (63.37%), Query Frame = -2 Query: 291 RDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTEVWEVKAADLTISPVHRAAIGVVDPDKGISLRFPRLIRVREDKTPEQASSSEQVAEMYTAQ 806 +D+ Y+ R W+KLKKDY + DS+DLV + AF+GRGKR G + L+A YD + + F ++CK+ +GFS+A LEE L + K P R I PD+W +P V E+ A++T+SP+H GVV + G+S+RFPR IR R+DK+ E+A++ ++ EMY ++ Sbjct: 418 KDSIYQAGARGFLWIKLKKDYQSEMADSVDLVIVGAFYGRGKRGGKLSSLLMAAYDPDKDTFYTVCKVASGFSDAELEEVQKMLSEAKLDKKDP--RVESEIQPDIWVKPKYVAEIIGAEITLSPLHTCCKGVVSEEAGLSIRFPRFIRWRDDKSVEEATTPNEILEMYQSR 587
BLAST of CX078278 vs. ExPASy Swiss-Prot
Match: DNLI3_SCHPO (DNA ligase 3 OS=Schizosaccharomyces pombe GN=adl1 PE=2 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.480e-36 Identity = 75/174 (43.10%), Postives = 116/174 (66.67%), Query Frame = -2 Query: 291 ATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSS--SLRSKVIPKPRPYYRFADT--ISPDVWFEPTEVWEVKAADLTISPVHRAAIGVVDPDKGISLRFPRLIRVREDKTPEQASSSEQVAEMYTAQ 800 +TYEP KR W+K+K+DY + +SLDLVPI A++G G++ G + LLA Y+ + ++++CK +GFS+ +E + SL S +P Y F +T ++P ++F P EVWE+K A +T SP ++AA+G++ D+G+S+RFPR IRVR DK PE AS++ +A+MY Q Sbjct: 600 STYEPDKRGEGWIKVKQDYDDEF-ESLDLVPIGAWYGNGRKAGWFSPILLAVYNPDTGAYEAVCKCMSGFSDQFYKELTQKYSLESGN-SSLKPIYNFCETGKVTPQIYFAPQEVWEIKGAQITSSPAYKAALGLIQDDRGLSIRFPRFIRVRSDKGPEDASTNSILADMYMKQ 771 The following BLAST results are available for this feature:
BLAST of CX078278 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 94
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Sequences
The
following sequences are available for this feature:
EST sequence >CX078278 ID=CX078278; Name=CX078278; organism=Citrus sinensis; type=EST; length=807bpback to top |